Lag0021657 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021657
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDNA/RNA polymerases superfamily protein
Locationchr7: 10432783 .. 10433962 (+)
RNA-Seq ExpressionLag0021657
SyntenyLag0021657
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACACCTTCGCAAGAGCAGATTCCCTGTAGGCACTTATAACAAGCTCAAGCAAAGAAAGTTGGGCCCCTTTTCAATCATTGACAAGTACGGAGACAATGCCTACAAGATCGATCTACCTGAGGACATTCAATGTCGCTGATTTATATGTTTATCAACCACCGGATGACTTTAGTTTAACTACTTAACTCGAGGACGAGTTTAATCTTTTGGGTGGAGATGTTTGGTGTAGCCGAATATGTGTTAAGTTAGTGAAGTCTTTTATTTTTAGTAGTCATGTGCATGGCACATGTTGTAACTACTTTTAGTTATTCTCCTTGCCTATTTAAAGGTAAGAGATCTTCAATAAAAGGGCATTCATTGATTGTTTATTCAAATTGGTTCTCGGCTCCACCAGACATACTTGTGACTTTGAGGAGGCTAACACAATGACTTGGAAAAGAAGACTTGAGATGACTTGGAGGAGGCAACATAGTGGTGACTTTGAAGAATGGTCAAGATGGCAATCGCTTGGAGGACGCCATGGTGAAGACATGAAAGTGGCAAGATGGCGGTGATTTGTGGTGTAGACGACATGCCAATGGTTTGAAAGAGGTAACATGGTGAAGACATGGAGGTGGACACATGGCGTTGAGTTTGAGGAAGAGGCAACCTGTCAGTGGCTCAGAGGAGAAGACAATATGGCGAAGACATCAATATGGCAACTTGGCGTCAACTTGGAAGAGGAGGCTTGGAGGTGACTTGGAGGAGGCAACGTGGTTGTAGCGTGAAGGAGACTTGGTGTGGTGCTAGTGGACGAGCGTTATGGTGGGGACTTGAGAAGGATATTCGAAGGTTACATAGAGGCTGATGGCTTTAACTTGGAGGAGCTTGGGAGGAAGCGACGTGGCAATTATTTGGGGGAGGATTATGCAATGACATCCTTGTGACTTTGAGGAGGCTAATGCAATGACTTGGAAAGAAGCTTGGAGCTGACTTAGAGGAGGCGAGCTGGCAGGAGTATGAAGAATGGTCGACATGACCGTGCTTGAACGAGGAAACATGTGATGACATGTAGGTGGCAACATGGCTGTAATTTGGGGTGCAGGCGACATGGCAGTGGTTTGGAAAAGGAGGTAACGTCGCAAAGATATGGATTAGGACACATGGCGGTGACTTTGAAGAAGGCAATATATTAG

mRNA sequence

ATGATACACCTTCGCAAGAGCAGATTCCCTGTAGGCACTTATAACAAGCTCAAGCAAAGAAAGTTGGGCCCCTTTTCAATCATTGACAAACATACTTGTGACTTTGAGGAGGCTAACACAATGACTTGGAAAAGAAGACTTGAGATGACTTGGAGGAGGCAACATAGTGGTGACTTTGAAGAATGGTCAAGATGGCAATCGCTTGGAGGACGCCATGGTGAAGACATGAAAGTGGCAAGATGGCGAGGCAACCTGTCAGTGGCTCAGAGGAGAAGACAATATGGCGAAGACATCAATATGGCAACTTGGCGTCAACTTGGAAGAGGAGGCTTGGAGGTGACTTGGAGGAGGCAACGTGGTTGTAGCGTGAAGGAGACTTGGTGTGGTGCTAGTGGACGAGCGTTATGGTGGGGACTTGAGAAGGATATTCGAAGGCGACATGGCAGTGGTTTGGAAAAGGAGGTAACGTCGCAAAGATATGGATTAGGACACATGGCGGTGACTTTGAAGAAGGCAATATATTAG

Coding sequence (CDS)

ATGATACACCTTCGCAAGAGCAGATTCCCTGTAGGCACTTATAACAAGCTCAAGCAAAGAAAGTTGGGCCCCTTTTCAATCATTGACAAACATACTTGTGACTTTGAGGAGGCTAACACAATGACTTGGAAAAGAAGACTTGAGATGACTTGGAGGAGGCAACATAGTGGTGACTTTGAAGAATGGTCAAGATGGCAATCGCTTGGAGGACGCCATGGTGAAGACATGAAAGTGGCAAGATGGCGAGGCAACCTGTCAGTGGCTCAGAGGAGAAGACAATATGGCGAAGACATCAATATGGCAACTTGGCGTCAACTTGGAAGAGGAGGCTTGGAGGTGACTTGGAGGAGGCAACGTGGTTGTAGCGTGAAGGAGACTTGGTGTGGTGCTAGTGGACGAGCGTTATGGTGGGGACTTGAGAAGGATATTCGAAGGCGACATGGCAGTGGTTTGGAAAAGGAGGTAACGTCGCAAAGATATGGATTAGGACACATGGCGGTGACTTTGAAGAAGGCAATATATTAG

Protein sequence

MIHLRKSRFPVGTYNKLKQRKLGPFSIIDKHTCDFEEANTMTWKRRLEMTWRRQHSGDFEEWSRWQSLGGRHGEDMKVARWRGNLSVAQRRRQYGEDINMATWRQLGRGGLEVTWRRQRGCSVKETWCGASGRALWWGLEKDIRRRHGSGLEKEVTSQRYGLGHMAVTLKKAIY
Homology
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BLAST of Lag0021657 vs. NCBI nr
Match: KAA0035682.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30862.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-04
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 1  MIHLRKSRFPVGTYNKLKQRKLGPFSIIDK 31
          MIHLRK+RFP GTYNKLK R+LGPF II K
Sbjct: 43 MIHLRKNRFPTGTYNKLKDRQLGPFRIIKK 72

The following BLAST results are available for this feature:
BLAST of Lag0021657 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035682.17.2e-0480.00DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30862.1 D... [more]
BLAST of Lag0021657 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021657.1Lag0021657.1mRNA