Lag0021087 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021087
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr7: 4554129 .. 4554839 (+)
RNA-Seq ExpressionLag0021087
SyntenyLag0021087
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGACAAACTGACAGGGTCGAATTTTGAGCTTGTGGTCATTTTTTGGTGGTCTGTGTGGAATCTACGAAAAAGCCTGTTTTGGGGTGGGCAGTCAGACGGTCGGGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCAGGAAGAGCGCGGTGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCAATGCTTCGGTACGGCCGGATACAGAAGAAGCGGGGGGTGGCTATGTGCTGCGAGGGGCTGAGGGTGAGGTATTCATGGCAGCTTTTTTGAGCTTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGTTGGGCTGTGTATAGAGGGATCCAACTTGCTCGACAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGCTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACGGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGCGAGGTCTCAGACGTCTTGAGGGGTGATTTTGTTTCAGTTGCATGA

mRNA sequence

ATGAGGGACAAACTGACAGGGTCGAATTTTGAGCTTGTGGTCATTTTTTGGTGGTCTGTGTGGAATCTACGAAAAAGCCTGTTTTGGGGTGGGCAGTCAGACGGTCGGGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCAGGAAGAGCGCGGTGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCAATGCTTCGGTACGGCCGGATACAGAAGAAGCGGGGGGTGGCTATGTGCTGCGAGGGGCTGAGGGTGAGGTATTCATGGCAGCTTTTTTGAGCTTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGTTGGGCTGTGTATAGAGGGATCCAACTTGCTCGACAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGCTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACGGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGCGAGGTCTCAGACGTCTTGAGGGGTGATTTTGTTTCAGTTGCATGA

Coding sequence (CDS)

ATGAGGGACAAACTGACAGGGTCGAATTTTGAGCTTGTGGTCATTTTTTGGTGGTCTGTGTGGAATCTACGAAAAAGCCTGTTTTGGGGTGGGCAGTCAGACGGTCGGGATCTCTGGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCAGGAAGAGCGCGGTGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCAATGCTTCGGTACGGCCGGATACAGAAGAAGCGGGGGGTGGCTATGTGCTGCGAGGGGCTGAGGGTGAGGTATTCATGGCAGCTTTTTTGAGCTTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGTTGGGCTGTGTATAGAGGGATCCAACTTGCTCGACAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGCTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACGGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGCGAGGTCTCAGACGTCTTGAGGGGTGATTTTGTTTCAGTTGCATGA

Protein sequence

MRDKLTGSNFELVVIFWWSVWNLRKSLFWGGQSDGRDLWAYSSDYLSAFHVGGGRCGARDSSWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNGKVLFTPRQGNKVAHVLARLAFSYVDRVWLEEWPSEVSDVLRGDFVSVA
Homology
BLAST of Lag0021087 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-29
Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 0

Query: 3   DKLTGSNFELVVIFWWSVWNLR----KSLFWGGQSDGRDLWAYSSDYLSAFHVGGGRCGA 62
           D ++  +   +V+  W++WN R    +    GG     DL ++S +YL  +     +   
Sbjct: 34  DLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLS--DLVSWSENYLQVY-----QAAQ 93

Query: 63  RDSSWAQSREQEER-GVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFL 122
           R S  A    +  R  +WRPP    LK+N++A+ R ++  AG G ++R + G V++ A  
Sbjct: 94  RSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIR 153

Query: 123 SLQRCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDD 182
            L R   VD  EG+AVY GI LA + GF+ F +ETDSLR+  +L  +  D SEVG+L   
Sbjct: 154 LLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSV 213

Query: 183 IRRILSPWVNG-KVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSDVLRGD 232
           I+  LS         FT R GN  AH+LA+LA +    ++W+EEWP E+S VL  D
Sbjct: 214 IKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262

BLAST of Lag0021087 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-22
Identity = 73/224 (32.59%), Postives = 117/224 (52.23%), Query Frame = 0

Query: 11   ELVVIFWWSVWNLR-KSLFWGGQSDGRDLWAYSSDYLSAFH---VGGGRCGARDSSWAQS 70
            EL++++ W +W+ R K +F G +SD R L A +   L A+      G   GA+D    Q 
Sbjct: 1232 ELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQ 1291

Query: 71   REQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRCWSVD 130
            +       W+PP    LKLN++A+V    ++ G G ++R AEG++        Q    V 
Sbjct: 1292 K-------WKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVS 1351

Query: 131  LAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWV 190
            LAE  A++ G+Q+A Q+     +VE+D   +V++LN      +E+  ++ D+RR    + 
Sbjct: 1352 LAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKEFK 1411

Query: 191  NGKVLFTPRQGNKVAHVLARLAF--SYVDRVWLEEWPSEVSDVL 229
              +  F PR  N  AH LA+ A   S  D VW+  +P+EV +VL
Sbjct: 1412 QVQFSFIPRTCNTYAHALAKFALRNSSTD-VWVGTFPAEVQNVL 1447

BLAST of Lag0021087 vs. NCBI nr
Match: XP_023884925.1 (uncharacterized protein LOC111997106 [Quercus suber])

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-22
Identity = 75/234 (32.05%), Postives = 116/234 (49.57%), Query Frame = 0

Query: 3   DKLTGSNFELVVIFWWSVWNLRKSLFWGGQ-SDGRDLWAYSSDYLSAFHVGGGRCGARDS 62
           ++L+    EL     W VWN R  L  GGQ      L   + +Y+S F     R G    
Sbjct: 6   ERLSQDELELFWTQAWIVWNQRNCLLHGGQLKVPSSLNKRAEEYISEFKEAQSRLG---- 65

Query: 63  SWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQR 122
              Q  +Q     W+PPP  E K+N +A++  +  + G G ++R   GEV  A   S   
Sbjct: 66  --VQRAQQPAGDTWQPPPPGEFKMNFDAAMFSELGKTGYGAIIRNENGEVMAAMSASGPM 125

Query: 123 CWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRI 182
             + D AE  A  R I+ A   GF   +VE D++ +V+ ++  + ++S +G+++DDIR +
Sbjct: 126 VRTSDEAEFLACRRAIEFAVDAGFSRMIVEGDNINVVQAISSSVENISPIGIVVDDIRHL 185

Query: 183 LS--PWVNGKVLFTPRQGNKVAHVLARLAFSYVDR--VWLEEWPSEVSDVLRGD 232
           L    WV+  +    R GN VAHVLA+ A + +D    WLE+ P   ++ L  D
Sbjct: 186 LRSLQWVS--ICCIRRGGNHVAHVLAQYARNCLDEDLYWLEDSPPPAAEALYRD 231

BLAST of Lag0021087 vs. NCBI nr
Match: XP_015383105.1 (uncharacterized protein LOC107175839 [Citrus sinensis] >XP_024046549.1 uncharacterized protein LOC112100911 [Citrus clementina])

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-22
Identity = 72/226 (31.86%), Postives = 119/226 (52.65%), Query Frame = 0

Query: 1   MRDKLTGSNFELVVIFWWSVWNLRK-SLFWGGQSDGRDLWAYSSDYLSAFHVGGGRCGAR 60
           M + L  ++FEL+V  +WS+W+ R   LF G ++D     A +   L ++     R    
Sbjct: 30  MTEMLNRTDFELLVACFWSIWHARNLFLFEGKKADPLVSMAKAEAVLDSYK----RVKIP 89

Query: 61  DSSWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSL 120
            SS  +S+   ++  W+PPP   +K+N+NA+ + + + AG G VLR   G V  AA    
Sbjct: 90  SSSHLESKITVKQQRWKPPPQGWIKINVNAATKIEKQVAGLGIVLRDFNGSVVAAAVKPS 149

Query: 121 QRCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIR 180
           +    +  AE  A+  G+Q+AR +     +VE DS  +  +LN +  + SEV  ++ +I+
Sbjct: 150 KFYGDIIFAEAEAIEWGLQVARFISMASIIVEIDSQGVSDLLNNKKSNRSEVFWVILEIQ 209

Query: 181 RILSPWVNGKVLFTPRQGNKVAHVLARLAFSYVDRV-WLEEWPSEV 225
            ++  + N KV +TPR  N +AH LARLA    + V W   +P  +
Sbjct: 210 ELVKDFCNVKVQYTPRHCNSIAHSLARLALGCEESVIWENPFPKNI 251

BLAST of Lag0021087 vs. NCBI nr
Match: XP_023928118.1 (uncharacterized protein LOC112039474 [Quercus suber])

HSP 1 Score: 111.7 bits (278), Expect = 8.7e-21
Identity = 74/231 (32.03%), Postives = 113/231 (48.92%), Query Frame = 0

Query: 4   KLTGSNFELVVIFWWSVWNLRKSLFWGGQ-SDGRDLWAYSSDYLSAFHVGGGRCGARDSS 63
           KL+ + FEL VI  W +WN R ++ +GG+  D + L  ++ ++L  FH   G+     S 
Sbjct: 89  KLSINEFELFVIQSWIIWNQRNTVVFGGKLKDPKWLNKWAKEFLDEFHQAQGQLRIPVSC 148

Query: 64  WAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRC 123
              S       VWRPPP+   KLN +A V      +G G ++R   GEV       +   
Sbjct: 149 LGDS-------VWRPPPDSTFKLNFDAVVFSKLSCSGVGAMIRNENGEVMATMLARVPHV 208

Query: 124 WSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRIL 183
               +AE  A  R ++ A + GF D VVE D+L ++K L     D+S +G ++ DI+ + 
Sbjct: 209 VDSVVAEVIACRRAMKFACKAGFTDLVVEGDNLSVMKSLTTSETDLSWLGHIIQDIKWLT 268

Query: 184 SPWVNGKVLFTPRQGNKVAHVLARLAFS-YVDRVWLEEWPSEVSDVLRGDF 233
             +      +  R  N VA+ LAR A   + D  W+E+ P  V + L  DF
Sbjct: 269 RSFRRVSFSYVRRAANSVAYGLARYAKDIHEDMYWMEDNPPPVLEALYYDF 312

BLAST of Lag0021087 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-29
Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 0

Query: 3   DKLTGSNFELVVIFWWSVWNLR----KSLFWGGQSDGRDLWAYSSDYLSAFHVGGGRCGA 62
           D ++  +   +V+  W++WN R    +    GG     DL ++S +YL  +     +   
Sbjct: 34  DLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLS--DLVSWSENYLQVY-----QAAQ 93

Query: 63  RDSSWAQSREQEER-GVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFL 122
           R S  A    +  R  +WRPP    LK+N++A+ R ++  AG G ++R + G V++ A  
Sbjct: 94  RSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIR 153

Query: 123 SLQRCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDD 182
            L R   VD  EG+AVY GI LA + GF+ F +ETDSLR+  +L  +  D SEVG+L   
Sbjct: 154 LLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSV 213

Query: 183 IRRILSPWVNG-KVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSDVLRGD 232
           I+  LS         FT R GN  AH+LA+LA +    ++W+EEWP E+S VL  D
Sbjct: 214 IKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLAVD 262

BLAST of Lag0021087 vs. ExPASy TrEMBL
Match: A0A803PE40 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20
Identity = 71/230 (30.87%), Postives = 113/230 (49.13%), Query Frame = 0

Query: 5    LTGSNFELVVIFWWSVWNLRKSLFWG-GQSDGRDLWAYSSDYLSAFHVGGGRCGA--RDS 64
            L+    ELV +  W +W  R  +  G  + DG  L  Y+++Y+  +H    R  A     
Sbjct: 920  LSQQELELVFVIMWVIWTDRNKINHGESRRDGMALANYATNYMENYHKANNRPTAVTEPV 979

Query: 65   SWAQSREQEERGV-WRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQ 124
            + AQ       G+ W+PP    LKLN++A+V P ++  G G ++R  +GEV  A    +Q
Sbjct: 980  TPAQISTLPTEGIPWKPPDMYGLKLNVDAAVNPTSKVLGVGAIVRNYKGEVMAAMSKLVQ 1039

Query: 125  RCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRR 184
             C+  D  E  A++  +    QL     +VETD+LR+   LN E  D+S    ++ D+R 
Sbjct: 1040 GCFRSDEMEAKALFHALNWISQLPLSVTLVETDALRVSNFLNHETWDLSCFSDIIFDVRC 1099

Query: 185  ILSPWVNGKVLFTPRQGNKVAHVLARLAFSY-VDRVWLEEWPSEVSDVLR 230
            +LS +    +    R  N+ AH LA+ A    VD  W+ E P  +  V++
Sbjct: 1100 LLSSFSRIVISHVKRSANQAAHGLAKHALGLDVDTCWMGEIPYPIFSVVK 1149

BLAST of Lag0021087 vs. ExPASy TrEMBL
Match: A0A5B7BI33 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037968 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-20
Identity = 71/231 (30.74%), Postives = 109/231 (47.19%), Query Frame = 0

Query: 3   DKLTGSNFELVVIFWWSVWNLRKSLFWGGQ-SDGRDLWAYSSDYLSAFHVGGGRCGARDS 62
           +KL  S  EL  +  W VW  R +++   Q  D   +   +  YL+ +H    R     S
Sbjct: 145 NKLDSSFIELWCVIIWIVWGHRNAIYHDRQGKDPLRVVFDAQQYLNEYHEAQHRLHIPPS 204

Query: 63  SWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQR 122
             +++       VW PPP    KLN++ S  P +   G G V+R + G V       L+ 
Sbjct: 205 VSSRAGS----SVWSPPPEDLFKLNVDGSWVPGSFSGGIGGVIRDSRGLVIAGFAKPLKW 264

Query: 123 CWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRI 182
           C S D AE  A++ G+  A+++G VD ++E+D L LV  +     D S +G + DDIRR 
Sbjct: 265 CGSADYAEACAMFFGVAFAKEIGIVDVLIESDCLSLVNSVGCSSPDFSHIGHITDDIRRG 324

Query: 183 LSPWVNGKVLFTPRQGNKVAHVLARLAFSYVDR-VWLEEWPSEVSDVLRGD 232
           +    + +V    R  N+ AH +A  A    +  +W+E  PS    VL  D
Sbjct: 325 MVGLRSFQVRHVRRSANQTAHEIASFARDVDEELLWIENLPSRFLQVLCSD 371

BLAST of Lag0021087 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20
Identity = 73/243 (30.04%), Postives = 118/243 (48.56%), Query Frame = 0

Query: 3   DKLTGSNFELVVIFWWSVWNLR-KSLFWGGQSDGR-DLWAYSSDYLSAFHVG-------- 62
           D++  +  E + +F W++WN R +S+F  G      ++  + +DYL  +           
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPL 61

Query: 63  --GGRCGARDSSWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGE 122
              GR G R S+W             PP     K+N++A+ +     AG   ++R +   
Sbjct: 62  LLDGR-GGRVSAWC------------PPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVN 121

Query: 123 VFMAAFLSLQRCWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSE 182
           V ++A   +     V LAE  A   G+ LA + G + F +ETDS ++  +L  +  D SE
Sbjct: 122 VLLSAMCFITHVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESE 181

Query: 183 VGLLMDDIRRILSP-WVNGKVLFTPRQGNKVAHVLARLAF-SYVDRVWLEEWPSEVSDVL 232
           +G+L   IR I+S   + G   F  R+GN  AH LAR+   S    VW+EEW S++S+V+
Sbjct: 182 IGVLASSIRHIVSSLHIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVI 231

BLAST of Lag0021087 vs. ExPASy TrEMBL
Match: A0A2P6SAP1 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0328181 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.1e-20
Identity = 70/231 (30.30%), Postives = 111/231 (48.05%), Query Frame = 0

Query: 3    DKLTGSNFELVVIFWWSVWNLRKSLFWGGQ-SDGRDLWAYSSDYLSAFHVGGGRCGARDS 62
            D +T  +  L  ++ W +W+ R +L W G   +  +   ++S +L  +         +  
Sbjct: 988  DVITEHHRNLFFVYLWVIWSERNNLVWNGSVFNAYNAAQWASKFLGEYQ--------QVH 1047

Query: 63   SWAQSREQEERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQR 122
               Q +    R  W  PP   LK+NI+ S RP++ + G G V+R  +G    A       
Sbjct: 1048 PTRQKKSGRTRAKWENPPTGRLKINIDGSYRPESGDGGIGVVIRDDKGSCMAAMARYFPN 1107

Query: 123  CWSVDLAEGWAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRI 182
              S    E  A   G+ LA    + +F++E+D   +V  LN  L D SEVG ++DD +  
Sbjct: 1108 VLSAFHMEAEACRAGLLLAIYQEWDEFILESDCSLMVAALNQNLEDRSEVGRIIDDCKSY 1167

Query: 183  LSPWVNGKVLFTPRQGNKVAHVLARLAFS-YVDRVWLEEWPSEVSDVLRGD 232
            L+   + K+    R+ N VA+ LA LA S +++ VWLEE P  + DVL  D
Sbjct: 1168 LTSLHSIKISHVFREANGVANRLAHLARSKFLNDVWLEEAPVIIQDVLYED 1210

BLAST of Lag0021087 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 0

Query: 11  ELVVIFWWSVWNLRKSL-FWGGQSDGRDLWAYSSDYLSAFHVGGGRCGARDSSWAQSREQ 70
           +LV    W +W  R  L F G + + +++   + D L  + +   R  A          +
Sbjct: 358 QLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRI---RTEAESCGTKPQVNR 417

Query: 71  EERGVWRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRCWSVDLAE 130
              G WRPPP++ +K N +A+   D E  G G+VLR  +GEV      +L +  SV  AE
Sbjct: 418 SSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE 477

Query: 131 ----GWAVYRGIQLAR-QLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSP 190
                WAV   + L+R Q  +V F  E+DS  L++ILN +      +   + D++R+LS 
Sbjct: 478 LEAMRWAV---LSLSRFQYNYVIF--ESDSQVLIEILNND-EIWPSLKPTIQDLQRLLSQ 537

Query: 191 WVNGKVLFTPRQGNKVAHVLARLAFSYVD 214
           +   K +F PR+GN +A  +AR + S+++
Sbjct: 538 FTEVKFVFIPREGNTLAERVARESLSFLN 557

BLAST of Lag0021087 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = 0

Query: 18  WSVWNLRKS----LFWGGQSDGRDLWAYSSDYLSAFHVGGGRCGARDSSWAQSREQEERG 77
           W +W L KS    +F G + D  ++   + +    +         R+     S  Q ER 
Sbjct: 79  WLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWST------RRELEGKASGPQVERN 138

Query: 78  V---WRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRCWSVDLAEG 137
           +   W+ PP + +K N +A+ + +    G G++LR   G V      +L R  +V  AE 
Sbjct: 139 LSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAEL 198

Query: 138 WAVYRGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNGKV 197
            A+   +    +  +   + E+D+  LV +LN +      +   ++DI+++L  +   K 
Sbjct: 199 EALRWAVLTMSRFNYKRIIFESDAQALVNLLNSD-DFWPTLQPALEDIQQLLHHFEEVKF 258

Query: 198 LFTPRQGNKVAHVLARLAFSY 212
            FTPR GNKVA  +AR + S+
Sbjct: 259 EFTPRGGNKVADRIARESISF 272

BLAST of Lag0021087 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 40/150 (26.67%), Postives = 67/150 (44.67%), Query Frame = 0

Query: 75  WRPPPNRELKLNINASVRPDTEEAGGGYVLRGAEGEVFMAAFLSLQRCWSVDLAEGWAVY 134
           W+ PP+  +K N +A       ++   +++R  +G       L L    +   AE  A+ 
Sbjct: 13  WKAPPDTHIKCNYDAGFNVQNLDSTARWIIRNHDGIAQHWGSLQLDNTSTPLEAETKALL 72

Query: 135 RGIQLARQLGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNGKVLFTP 194
             +Q     G++  ++E D   L  +++G     + +  L+DDIR     + N +  F  
Sbjct: 73  AALQQTWIRGYLRVIMEGDCETLTNLVSGS-SSHNHLANLLDDIRIWAKKFSNVQFSFVR 132

Query: 195 RQGNKVAHVLARLAFS----YVDRVWLEEW 221
           R GNKVAH LA+L  +    Y D   L  W
Sbjct: 133 RGGNKVAHELAKLGCNSTCFYSDSCTLPIW 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150944.12.3e-2936.44uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_006491472.11.2e-2232.59uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_023884925.12.1e-2232.05uncharacterized protein LOC111997106 [Quercus suber][more]
XP_015383105.12.7e-2231.86uncharacterized protein LOC107175839 [Citrus sinensis] >XP_024046549.1 uncharact... [more]
XP_023928118.18.7e-2132.03uncharacterized protein LOC112039474 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DBJ71.1e-2936.44uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803PE402.1e-2030.87Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5B7BI333.6e-2030.74Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037968... [more]
A0A6J1C4674.7e-2030.04uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A2P6SAP16.1e-2030.30Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... [more]
Match NameE-valueIdentityDescription
AT4G29090.11.1e-1631.10Ribonuclease H-like superfamily protein [more]
AT2G34320.12.3e-1126.37Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT2G13980.12.4e-0826.67Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 86..208
e-value: 3.3E-23
score: 81.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 81..210
e-value: 2.2E-11
score: 45.9
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 59..222
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 85..206
e-value: 5.99887E-22
score: 85.4436
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 84..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021087.1Lag0021087.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity