Lag0019911 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019911
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	NAC domain-containing protein
Location	chr5: 46646598 .. 46647153 (-)
RNA-Seq Expression	Lag0019911
Synteny	Lag0019911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACATTCTTACATGTTCCTCCTGGTTTTCGATTCCATCCAACCGACGAAGAACTTGTGGATTACTATCTTAGAAAGAAGATTTCTTCAAGGAGGATTGATTTGGATGTCATTAAAGATGTAGATCTTTACAAAATTGAACCATGGGATCTTCAAGGTATTATCAAATAACATTGCATGAAGTTTTAAATTTGAGCTTAGAACATACAAACAATGATTTGAGCTGCCATTGCTGACCTCCATTATCTTCTTCTAAACTTGATCATGAATAGAGATATGTAGTCTTGGGACAGAGGATCAAAATGAATGGTACTTTTTCAGCCACAAGGACAAGAAATATCCGACAGGAACTCGAACCAATAGGGCGACGGCAGCTGGATTTTGGAAAGCAACTGGCAGAGATAAGGCCATCTATTCTAAGCATGACTTGATTGGTATGAGAAAGACGTTGGTCTTTTACAAAGGTCGAGCTCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAGTACAGGCTCGAAACCGATGAAAATGGTGCTCCACAGGCAAGTTAA

mRNA sequence

ATGAACACATTCTTACATGTTCCTCCTGGTTTTCGATTCCATCCAACCGACGAAGAACTTGTGGATTACTATCTTAGAAAGAAGATTTCTTCAAGGAGGATTGATTTGGATGTCATTAAAGATGTAGATCTTTACAAAATTGAACCATGGGATCTTCAAGAGATATGTAGTCTTGGGACAGAGGATCAAAATGAATGGTACTTTTTCAGCCACAAGGACAAGAAATATCCGACAGGAACTCGAACCAATAGGGCGACGGCAGCTGGATTTTGGAAAGCAACTGGCAGAGATAAGGCCATCTATTCTAAGCATGACTTGATTGGTATGAGAAAGACGTTGGTCTTTTACAAAGGTCGAGCTCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAGTACAGGCTCGAAACCGATGAAAATGGTGCTCCACAGGCAAGTTAA

Coding sequence (CDS)

ATGAACACATTCTTACATGTTCCTCCTGGTTTTCGATTCCATCCAACCGACGAAGAACTTGTGGATTACTATCTTAGAAAGAAGATTTCTTCAAGGAGGATTGATTTGGATGTCATTAAAGATGTAGATCTTTACAAAATTGAACCATGGGATCTTCAAGAGATATGTAGTCTTGGGACAGAGGATCAAAATGAATGGTACTTTTTCAGCCACAAGGACAAGAAATATCCGACAGGAACTCGAACCAATAGGGCGACGGCAGCTGGATTTTGGAAAGCAACTGGCAGAGATAAGGCCATCTATTCTAAGCATGACTTGATTGGTATGAGAAAGACGTTGGTCTTTTACAAAGGTCGAGCTCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAGTACAGGCTCGAAACCGATGAAAATGGTGCTCCACAGGCAAGTTAA

Protein sequence

MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGTEDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGAPQAS

Homology

[Close]

BLAST of Lag0019911 vs. NCBI nr
Match: XP_022141188.1 (NAC domain-containing protein 7-like [Momordica charantia])

HSP 1 Score: 311.2 bits (796), Expect = 4.6e-81
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT
Sbjct: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENGAPQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGAPQ 144

[Close]

BLAST of Lag0019911 vs. NCBI nr
Match: KAG6576798.1 (NAC domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MNTFLHVPPGFRFHPTDEELVDYYLRKKI SRRIDLDVIKDVDLYKIEPWDL+EICSLGT
Sbjct: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKICSRRIDLDVIKDVDLYKIEPWDLKEICSLGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of Lag0019911 vs. NCBI nr
Match: XP_022923096.1 (NAC domain-containing protein 7 [Cucurbita moschata])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MNTFLHVPPGFRFHPTDEELVDYYLRKKI SRRIDLDVIKDVDLYKIEPWDL+EICSLGT
Sbjct: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKICSRRIDLDVIKDVDLYKIEPWDLKEICSLGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of Lag0019911 vs. NCBI nr
Match: KAG7014825.1 (NAC domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MNTFLHVPPGFRFHPTDEELVDYYLRKKI SRRIDLDVIKDVDLYKIEPWDL+EICSLGT
Sbjct: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKICSRRIDLDVIKDVDLYKIEPWDLKEICSLGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of Lag0019911 vs. NCBI nr
Match: XP_022985495.1 (NAC domain-containing protein 7-like [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MNTFLHVPPGFRFHPTDEELVDYYLRKKI SRRIDLDVIKDVDLYKIEPWDL+EICSLGT
Sbjct: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKICSRRIDLDVIKDVDLYKIEPWDLKEICSLGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot
Match: Q9FWX2 (NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74
Identity = 123/144 (85.42%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MN+F HVPPGFRFHPTDEELVDYYLRKK++S+RI++D IKD+DLYKIEPWDLQE+C +G 
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           E+Q++WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIY +H LIGMRKTLVFYKGRA
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLETDENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot
Match: F4HYV5 (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-72
Identity = 122/144 (84.72%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           MN+F  VPPGFRFHPTDEELVDYYLRKK++S+RI++D+IKDVDLYKIEP DLQE+C +G 
Sbjct: 1   MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
           E+Q+EWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIY +H LIGMRKTLVFYKGRA
Sbjct: 61  EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAPQ 145
           PNGQKSDWIMHEYRLET ENG PQ
Sbjct: 121 PNGQKSDWIMHEYRLETSENGTPQ 144

[Close]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot
Match: Q9SL41 (NAC domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=NAC037 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-69
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 7   VPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGTEDQNEW 66
           VPPGFRFHPTDEELV YYLRKKI+S++IDLDVI+D+DLY+IEPWDLQE C +G E+QNEW
Sbjct: 9   VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEW 68

Query: 67  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKDKKYPTGTRTNRAT AGFWKATGRDKA+Y K  LIGMRKTLVFYKGRAPNG+KS
Sbjct: 69  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGKKS 128

Query: 127 DWIMHEYRLETDENGAPQ 145
           DWIMHEYRLE+DEN  PQ
Sbjct: 129 DWIMHEYRLESDENAPPQ 146

[Close]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot
Match: O65508 (NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.4e-69
Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 7   VPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGTEDQNEW 66
           VPPGFRFHPTDEELV YYLRKK++S++IDLDVI+D+DLY+IEPWDLQE C +G E++NEW
Sbjct: 10  VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEW 69

Query: 67  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKDKKYPTGTRTNRAT AGFWKATGRDKA+Y K  LIGMRKTLVFYKGRAPNGQK+
Sbjct: 70  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKT 129

Query: 127 DWIMHEYRLETDENGAPQ 145
           DWIMHEYRLE+DEN  PQ
Sbjct: 130 DWIMHEYRLESDENAPPQ 147

[Close]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot
Match: Q9LVA1 (NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-68
Identity = 113/143 (79.02%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MNTFLHVPPGFRFHPTDEELVDYYLRKKISSRRIDLDVIKDVDLYKIEPWDLQEICSLGT 60
           M +  H+PPG+RFHPTDEELVDYYL+ K++   + +DVIKDVDLYKIEPWD+QE+C  GT
Sbjct: 1   MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT 60

Query: 61  EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120
            ++ EWYFFSHKDKKYPTGTRTNRAT +GFWKATGRDKAIYSK +L+GMRKTLVFYKGRA
Sbjct: 61  GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETDENGAP 144
           PNGQKSDWIMHEYRLETDENG P
Sbjct: 121 PNGQKSDWIMHEYRLETDENGPP 143

The following BLAST results are available for this feature:

BLAST of Lag0019911 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141188.1	4.6e-81	100.00	NAC domain-containing protein 7-like [Momordica charantia]	[more]
KAG6576798.1	2.0e-79	97.22	NAC domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923096.1	2.0e-79	97.22	NAC domain-containing protein 7 [Cucurbita moschata]	[more]
KAG7014825.1	2.0e-79	97.22	NAC domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022985495.1	2.0e-79	97.22	NAC domain-containing protein 7-like [Cucurbita maxima]	[more]

BLAST of Lag0019911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWX2	1.2e-74	85.42	NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 S...	[more]
F4HYV5	1.1e-72	84.72	NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 ...	[more]
Q9SL41	5.5e-69	84.78	NAC domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=NAC037 PE=1 ...	[more]
O65508	9.4e-69	83.33	NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 ...	[more]
Q9LVA1	1.2e-68	79.02	NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 16..146 e-value: 1.3E-54 score: 186.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 5..140
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 8..135 e-value: 3.5E-39 score: 134.7
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 7..146 score: 55.299576
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 4..143
None	No IPR available	PANTHER	PTHR31989:SF383	NAC DOMAIN-CONTAINING PROTEIN 7-LIKE	coord: 4..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019911.1	Lag0019911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding