Lag0019776 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019776
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr5: 45351311 .. 45352816 (+)
RNA-Seq Expression	Lag0019776
Synteny	Lag0019776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACAGGGGAATCATCTTCTTCATCTTCCTTCACCTCCACGACTACACCAGTAGCTTCTCCAAATATTTCCCCAAATATCACTCCGGTTGTTACGCCGATAAACCAACCCCAAAATCCTCCTATTCAACCCGTACATCAACCCTTGCAGCTTCAACCTCCTCCAAATACTCTGATTCACTCTCCTAATCGCCCTGCCATTCGACCTCAACCACCACTTCCGCAATACCAGCAACCCATCGCCCCTCCCCAAACTCCAGTTTATTATCCTCAATTTTTCGCCCAGCCCTTTTATCCTTCTCAACTTTCGCGCCCTCAATCCCTACCAAATGTGTTCCAAACTCAAAATCCATATCCCCAAGCGTTTGCTCCAACAGCTTTTACTCAACCTCAACCTCCGCCCCTACTGTCATTTATCCTCAACCTCCGACCTTCCCCAATCCGATTGCACCTAATCCTTACCCAACCTTGCCGCAGCCCCTGTCAGTCAAACTAAATGACAACAACTTCCTCCTCTGGAAAAACCAGCTACTAAATGCTGTTTTAGCAAATGGTCTGAATGGTTTTCTCGATGGCACTATCCAGCACCTGCGAAGTTTATTGATGATCAGCAGCTACAACCGAATCCAGAGTTTCTTCTTTGGGAAAGGTATAATAGATTTATCATGTGTTGGATGTATTCCTCTCTGTCTAAAGAAAAAATGGGGGAGATAGTTAGTTTTCAAACTGCTGCTGAGATATGGAATTCTTTAAAAAGGTCTTATGACTCAAAAACTACTGCTAGAATCATGGGCTTAAAGACTCAACTCCAGAAAATAAAAAAGATGGCCTCTCTGTTAGCCAATACCTAGCTCAGATAAAAGATGTTGCTGATAAATTCTCTGCAATAGGTGAACCTATATCCTATCGAGATCATTTAGCCCACATTCTAGATGGTCTTGGTAGTGAATACAACCCTTTTGTCACCACAATTCAAAATCGTACTGATAATCCCTCTCTTGAGGATGTGCGTAGTCTTCTTTTGGAATATGAAGCTCGTTTAGAGAAGCAAACAACTGTTGAGCAACTTAATTTGGCCCAAGCAAACCTTAGTAGACTTCACATCCATAACAGCTGCCTTCCCTCTTTCCGACCCTCTAATCCAACCCTAGAACTCCCTTCAATCCACCCAATTTTCCTCTGTTTTCACCTCAATCAACTCCACCGGCCCTGTTTCTCAAAGTCTCCTAGGCAAACCTCAGTCCCAACCTATCCAGAAATGGACCTCTCGATCTTCATCAAACAAACCCCAATGTCAAATTTGTGGAAATTCGGTCATACTGCTCTCATTTGTCACCATAGAACCAACTTAGCTTATCAAACTCCACCACCCCAAGCCTTATTAACCACTGCCCATAATGTTCAACCTTCATCTGCTATCCCTGATTCCCTAACCACTATGTCTGTTGATTCTTTCCACCCGATGAAAATTGGTTCCTTGATTCTGGAGCGACACATCACATGA

mRNA sequence

ATGACGACAGGGGAATCATCTTCTTCATCTTCCTTCACCTCCACGACTACACCAGTAGCTTCTCCAAATATTTCCCCAAATATCACTCCGGTTGTTACGCCGATAAACCAACCCCAAAATCCTCCTATTCAACCCGTACATCAACCCTTGCAGCTTCAACCTCCTCCAAATACTCTGATTCACTCTCCTAATCGCCCTGCCATTCGACCTCAACCACCACTTCCGCAATACCAGCAACCCATCGCCCCTCCCCAAACTCCAGTTTATTATCCTCAATTTTTCGCCCAGCCCTTTTATCCTTCTCAACTTTCGCGCCCTCAATCCCTACCAAATGTGTTCCAAACTCAAAATCCATATCCCCAAGCGTTTGCTCCAACAGCTTTTACTCAACCTCAACCTCCGCCCCTACTGTCATTTATCCTCAACCTCCGACCTTCCCCAATCCGATTGCACCTAATCCTTACCCAACCTTGCCGCAGCCCCTCACCTGCGAAGTTTATTGATGATCAGCAGCTACAACCGAATCCAGAGTTTCTTCTTTGGGAAAGCCAATACCTAGCTCAGATAAAAGATGTTGCTGATAAATTCTCTGCAATAGGTGAACCTATATCCTATCGAGATCATTTAGCCCACATTCTAGATGGTCTTGGTAGTGAATACAACCCTTTTGTCACCACAATTCAAAATCGTACTGATAATCCCTCTCTTGAGGATGTGCGTAGTCTTCTTTTGGAATATGAAGCTCGTTTAGAGAAGCAAACAACTGTTGAGCAACTTAATTTGGCCCAAGCAAACCTTAGTAGACTTCACATCCATAACAGCTGCCTTCCCTCTTTCCGACCCTCTAATCCAACCCTAGAACTCCCTTCAATCCACCCAATTTTCCTCTGTTTTCACCTCAATCAACTCCACCGGCCCTGTTTCTCAAAGTCTCCTAGGCAAACCTCAGTCCCAACCTATCCAGAAATGGACCTCTCGATCTTCATCAAACAAACCCCAATGTCAAATTTGTGGAAATTCGGTCATACTGCTCTCATTTGTCACCATAGAACCAACTTAGCTTATCAAACTCCACCACCCCAAGCCTTATTAACCACTGCCCATAATGTTCAACCTTCATCTGCTATCCCTGATTCCCTAACCACTATGTCTGTTGATTCTTTCCACCCGATGAAAATTGGTTCCTTGATTCTGGAGCGACACATCACATGA

Coding sequence (CDS)

ATGACGACAGGGGAATCATCTTCTTCATCTTCCTTCACCTCCACGACTACACCAGTAGCTTCTCCAAATATTTCCCCAAATATCACTCCGGTTGTTACGCCGATAAACCAACCCCAAAATCCTCCTATTCAACCCGTACATCAACCCTTGCAGCTTCAACCTCCTCCAAATACTCTGATTCACTCTCCTAATCGCCCTGCCATTCGACCTCAACCACCACTTCCGCAATACCAGCAACCCATCGCCCCTCCCCAAACTCCAGTTTATTATCCTCAATTTTTCGCCCAGCCCTTTTATCCTTCTCAACTTTCGCGCCCTCAATCCCTACCAAATGTGTTCCAAACTCAAAATCCATATCCCCAAGCGTTTGCTCCAACAGCTTTTACTCAACCTCAACCTCCGCCCCTACTGTCATTTATCCTCAACCTCCGACCTTCCCCAATCCGATTGCACCTAATCCTTACCCAACCTTGCCGCAGCCCCTCACCTGCGAAGTTTATTGATGATCAGCAGCTACAACCGAATCCAGAGTTTCTTCTTTGGGAAAGCCAATACCTAGCTCAGATAAAAGATGTTGCTGATAAATTCTCTGCAATAGGTGAACCTATATCCTATCGAGATCATTTAGCCCACATTCTAGATGGTCTTGGTAGTGAATACAACCCTTTTGTCACCACAATTCAAAATCGTACTGATAATCCCTCTCTTGAGGATGTGCGTAGTCTTCTTTTGGAATATGAAGCTCGTTTAGAGAAGCAAACAACTGTTGAGCAACTTAATTTGGCCCAAGCAAACCTTAGTAGACTTCACATCCATAACAGCTGCCTTCCCTCTTTCCGACCCTCTAATCCAACCCTAGAACTCCCTTCAATCCACCCAATTTTCCTCTGTTTTCACCTCAATCAACTCCACCGGCCCTGTTTCTCAAAGTCTCCTAGGCAAACCTCAGTCCCAACCTATCCAGAAATGGACCTCTCGATCTTCATCAAACAAACCCCAATGTCAAATTTGTGGAAATTCGGTCATACTGCTCTCATTTGTCACCATAGAACCAACTTAGCTTATCAAACTCCACCACCCCAAGCCTTATTAACCACTGCCCATAATGTTCAACCTTCATCTGCTATCCCTGATTCCCTAACCACTATGTCTGTTGATTCTTTCCACCCGATGAAAATTGGTTCCTTGATTCTGGAGCGACACATCACATGA

Protein sequence

MTTGESSSSSSFTSTTTPVASPNISPNITPVVTPINQPQNPPIQPVHQPLQLQPPPNTLIHSPNRPAIRPQPPLPQYQQPIAPPQTPVYYPQFFAQPFYPSQLSRPQSLPNVFQTQNPYPQAFAPTAFTQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWESQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHPMKIGSLILERHIT

Homology

[Close]

BLAST of Lag0019776 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 176.0 bits (445), Expect = 6.4e-40
Identity = 106/200 (53.00%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 183 SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSL 242
           SQYLA+IK++ADKF+A+GEP+SYRDHLAH+LDGLGSEYN FVT+I NR D+PSLEDVRSL
Sbjct: 150 SQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSL 209

Query: 243 LLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRPSNPTLELPSI--HPIFLCFH 302
           LL YEARL+KQ TV+QLN+AQANL  L + HNS  P  + S P     S    PI     
Sbjct: 210 LLAYEARLDKQNTVDQLNIAQANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISAAQS 269

Query: 303 LNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPP 362
            + L +P         SV  +P    S  I+        K GH+A +C+HRTN+AY    
Sbjct: 270 QSILGKP--------QSVHKWPPKPSSSKIQ---CQICGKLGHSAAVCYHRTNIAYHNAS 329

Query: 363 PQALLTTAHNVQPSSAIPDS 380
           PQAL    H+VQPS   P S
Sbjct: 330 PQALY---HHVQPSPTHPSS 335

[Close]

BLAST of Lag0019776 vs. NCBI nr
Match: XP_038891713.1 (uncharacterized protein LOC120081111 [Benincasa hispida])

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-34
Identity = 101/215 (46.98%), Postives = 130/215 (60.47%), Query Frame = 0


Query: 183 SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSL 242
           SQYL+QIKDVADKFS +GE ISYRDHL HILDGLGSEYN FVT+IQN  DN S+EDV SL
Sbjct: 18  SQYLSQIKDVADKFSVVGESISYRDHLTHILDGLGSEYNAFVTSIQNHVDNLSVEDVWSL 77

Query: 243 LLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRP----SNPTLELPSIHPIFLC 302
           LL YEA+LEKQ  ++ LN+AQA LS+L   HNS   + RP    S+  L  P+  PI L 
Sbjct: 78  LLSYEAQLEKQNAIDHLNIAQAYLSKLSFQHNSKRNALRPFPNHSSLILPSPNFSPI-LP 137

Query: 303 FHLNQLH-RPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLW-KFGHTALICHHRTNLAY 362
              N +H RP F+K    +  P+             P   ++ KFGH    CH   + AY
Sbjct: 138 STSNSVHARPSFNKKWPPSKPPS-----------SKPQCQIYHKFGHIVPQCHQLASFAY 197

Query: 363 QTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP 391
           Q   PQA +++     P+S I   + ++++D  +P
Sbjct: 198 QCMNPQAHVSSVQPPTPTSII--DILSITLDFQYP 218

[Close]

BLAST of Lag0019776 vs. NCBI nr
Match: XP_022148871.1 (uncharacterized protein LOC111017438 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 8.7e-29
Identity = 85/207 (41.06%), Postives = 114/207 (55.07%), Query Frame = 0


Query: 183 SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSL 242
           SQYLA+IK++  K S+IGEPIS +DH+++I++GLG EYN FVT+IQNR+D  +LEDVR+L
Sbjct: 19  SQYLAKIKEITGKLSSIGEPISLKDHISYIIEGLGIEYNAFVTSIQNRSDMXTLEDVRTL 78

Query: 243 LLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSCLPSFRPSNPTLELPSIHPIF 302
           LL Y+ RLEKQ +V+QLN+ QAN++ L       H  N  +PS     P           
Sbjct: 79  LLAYDYRLEKQNSVDQLNVVQANVANLQLNRQSGHTRNHRVPSQHSPRP----------- 138

Query: 303 LCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAY 362
                N   +P     P Q S P +P    S    +      +K GHT   C+HR NL Y
Sbjct: 139 ----FNFKTQPGLLGKPNQNSQPPWPPSQQSPRNPKVQCQICFKLGHTTSKCYHRANLQY 198

Query: 363 Q-------TPPPQALLTTAHNVQPSSA 376
           +        P P AL    H+V  SS+
Sbjct: 199 KLNFFPTNQPNPHALF---HHVNSSSS 207

[Close]

BLAST of Lag0019776 vs. NCBI nr
Match: CAN77126.1 (hypothetical protein VITISV_013628 [Vitis vinifera])

HSP 1 Score: 136.0 bits (341), Expect = 7.4e-28
Identity = 103/298 (34.56%), Postives = 141/298 (47.32%), Query Frame = 0


Query: 129 TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE------ 188
           T   P  L +   N+ P+PI       +   +P PAKF+DD QLQ NP F+ WE      
Sbjct: 4   TTSSPTTLTANPQNINPTPISSLEDFIEG-ETPIPAKFLDDAQLQINPLFIQWERMNRLV 63

Query: 189 ---------------------SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYN 248
                                S+YLA+IK+V DK+SA+GEP+SYRD L + L+GL  EY+
Sbjct: 64  MSWIYSSLTLAMKIKKEGITISEYLARIKEVFDKYSAMGEPLSYRDKLMYTLNGLTEEYD 123

Query: 249 PFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLP 308
            FVT+I NR+D  SL++V SLL  Y   LE++ T +QL  +Q NL+    +   H +  P
Sbjct: 124 GFVTSIYNRSDKSSLKEVHSLLYTYAYWLEQRNTAQQLQFSQVNLTAYSGQNKFHKNQQP 183

Query: 309 SF--RPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQT 368
           +F   P N     P+  PI L        +P     P+   Q+S   + +     F  + 
Sbjct: 184 NFPKYPQNSYSSFPN-KPINLYQSFRPNSQPSILGKPQGQPQSSSKWFQKQGTGNFGPRP 243

Query: 369 PMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP 391
                 KFGH AL C+HR NL YQ   P        N QP    P+ +  M   S  P
Sbjct: 244 QCQICGKFGHMALNCYHRANLNYQPQFP--------NSQPKPQPPNPIAAMLTTSTSP 291

[Close]

BLAST of Lag0019776 vs. NCBI nr
Match: XP_038887133.1 (uncharacterized protein LOC120077323 [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-26
Identity = 74/135 (54.81%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 171 QLQPNPEFLLWESQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNR 230
           QLQ   +  L  SQYLAQIKDV D F+AIGEP+SYRDHL++IL+GLGSEYNPFV++I NR
Sbjct: 35  QLQKIKKDGLTVSQYLAQIKDVLDNFAAIGEPLSYRDHLSYILEGLGSEYNPFVSSIHNR 94

Query: 231 TDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLSRLHI-----------HNSCLPSF 290
           T+ PS+ DVR+LL+ Y++RLEKQT  + L L QAN++ L I           HN    S 
Sbjct: 95  TNRPSIADVRNLLITYDSRLEKQTATDHLQLIQANVAHLSINSQNRHPQWQQHNR--SSI 154

Query: 291 RPSNPTL-ELPSIHP 294
           R S P++   PSI P
Sbjct: 155 RSSTPSVGSFPSILP 167

[Close]

BLAST of Lag0019776 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.1e-40
Identity = 106/200 (53.00%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 183 SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSL 242
           SQYLA+IK++ADKF+A+GEP+SYRDHLAH+LDGLGSEYN FVT+I NR D+PSLEDVRSL
Sbjct: 150 SQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSL 209

Query: 243 LLEYEARLEKQTTVEQLNLAQANLSRLHI-HNSCLPSFRPSNPTLELPSI--HPIFLCFH 302
           LL YEARL+KQ TV+QLN+AQANL  L + HNS  P  + S P     S    PI     
Sbjct: 210 LLAYEARLDKQNTVDQLNIAQANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISAAQS 269

Query: 303 LNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPP 362
            + L +P         SV  +P    S  I+        K GH+A +C+HRTN+AY    
Sbjct: 270 QSILGKP--------QSVHKWPPKPSSSKIQ---CQICGKLGHSAAVCYHRTNIAYHNAS 329

Query: 363 PQALLTTAHNVQPSSAIPDS 380
           PQAL    H+VQPS   P S
Sbjct: 330 PQALY---HHVQPSPTHPSS 335

[Close]

BLAST of Lag0019776 vs. ExPASy TrEMBL
Match: A0A6J1D6N7 (uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017438 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 85/207 (41.06%), Postives = 114/207 (55.07%), Query Frame = 0


Query: 183 SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSL 242
           SQYLA+IK++  K S+IGEPIS +DH+++I++GLG EYN FVT+IQNR+D  +LEDVR+L
Sbjct: 19  SQYLAKIKEITGKLSSIGEPISLKDHISYIIEGLGIEYNAFVTSIQNRSDMXTLEDVRTL 78

Query: 243 LLEYEARLEKQTTVEQLNLAQANLSRL-------HIHNSCLPSFRPSNPTLELPSIHPIF 302
           LL Y+ RLEKQ +V+QLN+ QAN++ L       H  N  +PS     P           
Sbjct: 79  LLAYDYRLEKQNSVDQLNVVQANVANLQLNRQSGHTRNHRVPSQHSPRP----------- 138

Query: 303 LCFHLNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAY 362
                N   +P     P Q S P +P    S    +      +K GHT   C+HR NL Y
Sbjct: 139 ----FNFKTQPGLLGKPNQNSQPPWPPSQQSPRNPKVQCQICFKLGHTTSKCYHRANLQY 198

Query: 363 Q-------TPPPQALLTTAHNVQPSSA 376
           +        P P AL    H+V  SS+
Sbjct: 199 KLNFFPTNQPNPHALF---HHVNSSSS 207

[Close]

BLAST of Lag0019776 vs. ExPASy TrEMBL
Match: A5BPS3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013628 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-28
Identity = 103/298 (34.56%), Postives = 141/298 (47.32%), Query Frame = 0


Query: 129 TQPQPPPLLSFILNLRPSPIRLHLILTQPCRSPSPAKFIDDQQLQPNPEFLLWE------ 188
           T   P  L +   N+ P+PI       +   +P PAKF+DD QLQ NP F+ WE      
Sbjct: 4   TTSSPTTLTANPQNINPTPISSLEDFIEG-ETPIPAKFLDDAQLQINPLFIQWERMNRLV 63

Query: 189 ---------------------SQYLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYN 248
                                S+YLA+IK+V DK+SA+GEP+SYRD L + L+GL  EY+
Sbjct: 64  MSWIYSSLTLAMKIKKEGITISEYLARIKEVFDKYSAMGEPLSYRDKLMYTLNGLTEEYD 123

Query: 249 PFVTTIQNRTDNPSLEDVRSLLLEYEARLEKQTTVEQLNLAQANLS----RLHIHNSCLP 308
            FVT+I NR+D  SL++V SLL  Y   LE++ T +QL  +Q NL+    +   H +  P
Sbjct: 124 GFVTSIYNRSDKSSLKEVHSLLYTYAYWLEQRNTAQQLQFSQVNLTAYSGQNKFHKNQQP 183

Query: 309 SF--RPSNPTLELPSIHPIFLCFHLNQLHRPCFSKSPR---QTSVPTYPEMDLSIFIKQT 368
           +F   P N     P+  PI L        +P     P+   Q+S   + +     F  + 
Sbjct: 184 NFPKYPQNSYSSFPN-KPINLYQSFRPNSQPSILGKPQGQPQSSSKWFQKQGTGNFGPRP 243

Query: 369 PMSNLWKFGHTALICHHRTNLAYQTPPPQALLTTAHNVQPSSAIPDSLTTMSVDSFHP 391
                 KFGH AL C+HR NL YQ   P        N QP    P+ +  M   S  P
Sbjct: 244 QCQICGKFGHMALNCYHRANLNYQPQFP--------NSQPKPQPPNPIAAMLTTSTSP 291

[Close]

BLAST of Lag0019776 vs. ExPASy TrEMBL
Match: A0A7J0E8R3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_02g0010880 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-22
Identity = 78/215 (36.28%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 185 YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLL 244
           Y+ + + + +  ++IGEP++Y DHL + L GLG +YNPFVT+IQ++   PS+E+V SLLL
Sbjct: 61  YIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLL 120

Query: 245 EYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP-TLELPS----IHPIFLCFH 304
            Y+ARLE+Q+  + L+  QANL+ L       P F+  NP T   P+     HP      
Sbjct: 121 SYDARLERQSATDTLSSLQANLANLTYQK---PKFK--NPSTNSFPNSNSYSHP------ 180

Query: 305 LNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPP 364
             Q   P +S +P  +S    P   + +           K GHTA  C+HRTNL YQ PP
Sbjct: 181 RGQNRNPSYSPNP--SSPKPRPRCQICL-----------KPGHTANKCYHRTNLNYQPPP 240

Query: 365 P-----QALLTTAHNVQPSSAIPDSLTTMSVDSFH 390
           P      A +T   ++  SS  P S +++   S++
Sbjct: 241 PPPRNFNAYITPNPSISTSSNQPASASSLPDSSWY 251

[Close]

BLAST of Lag0019776 vs. ExPASy TrEMBL
Match: A0A7J0DER3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0030110 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-22
Identity = 78/214 (36.45%), Postives = 113/214 (52.80%), Query Frame = 0


Query: 185 YLAQIKDVADKFSAIGEPISYRDHLAHILDGLGSEYNPFVTTIQNRTDNPSLEDVRSLLL 244
           Y+ + + + +  ++IGEP++Y DHL + L GLG +YNPFVT+IQ++   PS+E+V SLLL
Sbjct: 61  YIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLL 120

Query: 245 EYEARLEKQTTVEQLNLAQANLSRLHIHNSCLPSFRPSNP-TLELPS----IHPIFLCFH 304
            Y+ARLE+Q+  + L+  QANL+ L       P F+  NP T   P+     HP      
Sbjct: 121 SYDARLERQSATDTLSSLQANLANLTYQK---PKFK--NPSTNSFPNSNSYSHP------ 180

Query: 305 LNQLHRPCFSKSPRQTSVPTYPEMDLSIFIKQTPMSNLWKFGHTALICHHRTNLAYQTPP 364
             Q   P +S +P  +S    P   + +           K GHTA  C+HRTNL YQ PP
Sbjct: 181 RGQNRNPSYSPNP--SSPKPRPRCQICL-----------KPGHTANKCYHRTNLNYQPPP 240

Query: 365 PQALLTTAH---NVQPSSAIPDSLTTMSVDSFHP 391
           P      A+   N   S++ P S   + +   HP
Sbjct: 241 PPPRNFNAYITPNPSISTSRPTSQPVLLLSQIHP 250

The following BLAST results are available for this feature:

BLAST of Lag0019776 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155181.1	6.4e-40	53.00	uncharacterized protein LOC111022315 [Momordica charantia]	[more]
XP_038891713.1	1.4e-34	46.98	uncharacterized protein LOC120081111 [Benincasa hispida]	[more]
XP_022148871.1	8.7e-29	41.06	uncharacterized protein LOC111017438 [Momordica charantia]	[more]
CAN77126.1	7.4e-28	34.56	hypothetical protein VITISV_013628 [Vitis vinifera]	[more]
XP_038887133.1	2.4e-26	54.81	uncharacterized protein LOC120077323 [Benincasa hispida]	[more]

BLAST of Lag0019776 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0019776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQX7	3.1e-40	53.00	uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D6N7	4.2e-29	41.06	uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A5BPS3	3.6e-28	34.56	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013628 PE=4 SV=1	[more]
A0A7J0E8R3	1.3e-22	36.28	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_02g0010880 PE=4 SV=1	[more]
A0A7J0DER3	1.7e-22	36.45	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0030110 PE=4 SV=1	[more]

BLAST of Lag0019776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 184..252 e-value: 2.2E-10 score: 40.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..52
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 183..385
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 183..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019776.1	Lag0019776.1	mRNA