Lag0019773 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCACGAAGACGTCGACATGATTGGCTCGGAGTCCAACGATGCTGTGGTTCGTTTTCATTCCTTTTCCTCTTTCCAATCCCTTCCTATTCCATCATCAATCCACTTCTATAAACCCTAATTCCTCTCTCTCTCTCTCTCCCTTTCAGGAGTTGGACGACATGAAGAAACGCTTGAAAGAGATGGAAGATGAAGCTGCTGCCCTTCGCGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCCGTACAAGGTTTCTTTCTTCTCTTCTTCCCTCTTTTCCAATTCCCTTTACAATGTCCTTCACATATCCCCACCCTATTTACCATTCTCAATACTTAATTACTAGGAGGTCCACTTTTTGGGCTGGAATTGAATTGCTATTTCTTTCATTGGATATTATACGACTTGAGGATGTTAACGAAATCTGTGGTTTTGGAACAAGGGATCTCATGGAAACTAAGTTTTGAGCTTTCTATGATTGGTTCTCATCTTGATCATTAGGTGGTTGTTTCTAATTAAGAGGAGTTGGCTATTCTACTTCTTTTTGTTCTTTGAAAAAGATGCCAACTTTGGAATTTAGGAGTTTGTTCTGTGTTGATTTTCCAGTACATGTTTTTAGCCTAATTATGTACTCATAGTTGAGAAGTTCTATCATGTCTGTTGCCGTTAAATATTTCACCACTTTTTGTACTGCCAGATCCAGCTAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATTCTCGGTCAGTGTTTGTTGGCAATGTAAGTTCTCTTTTTCCTTTACCCATATTATTTTCTCTTTTCCCATTACCTGTCGCTTGCTTTGGTGGTCACTCTTACTACACGATTAGCTGAACAATGTCGGCTTTGTTAATGTGAGAGACTTAGCTCACCTAAAGAAGAAGGCTATTTATTTCCATTCAACGACAAACTGACTGATTCTTATCTATTTACAATATTTGACATTGGAGGTTTGTTTTTTGTGTTGGTGTAGTTATTGGTATAGAGGGCTAAACTCCAGTTTTTGTTCTTTCTTTTTTGGAATGCAGCCATCAATTTATCAACTTTAATAGCTTGTGAAGGGAAACACATTGAGTGTTATTAATTTAACCCTTTCCCCCATTTTCTTAGTTGTTTCATGTTTGAAAAAGTTTAACATTATGTCTTTACTGTTTGCACTACCTCTAATTTTTACTAGATTTGTTATTTCTAACATTTTAAGTCATTTTTGAAAGGAAGCTTAGACTTTCTATTCTTTCAATTTTCACTTATTAAATAATCTTCAGTACTTCTATAGTTATTATGGGTGCCTTTTCTTTTGTCCCAAGTATTTGATATGAAGAATGGGCAATCTTATTGCAGTATTTGACATAACCTTTTTATATTTTAATGGATCGGAGTTATCAATGATTGGAGGTAAATTGGCAAGATAAGCCACTTTTGAAGAACTATATTCTTCATTTAATAATAGAAAAAAGCTTTTTGAGCATGATTTTCTTTGAGTATTCGTTTATTTAATTCTTCACATGATTGAACTGACCGACCTTCATTCCTTGGGTTTGTTCATTTCCAGTATGGTCATAAAGGTTTCCTAAATTTCAGTTAGCCATGAGTTTTTGTTCCTTTTGGTACGTATCATTCATGTCTTTGGAAGAGGTAGGGTCATGCTTTCCATTTTGAGGACGTTGAAGCGTTGGTTGCTAGCAGTACTATTTTAGGGATGTTGGGAGGGATCATTTTATTATTGTCTATCGTTCTTCCTTTTAAGAGCTTTAAAATTAAACTACTCATGTTACATGAAATATTTTCCTCAGTGATTATTGCTATAAATTCTATCTATTTCAATTTAGATGGTTAATTTTTAAATTTTATAAATGAACAATTTCTGCACCGTGCTTGAAATTTTAGCATATTGCTGGTGTTTATAGCCTGATTTGACTCCTGTGTTTGACTGCAATTACAGGTTAGGCTTACTTCATCAGGTTTTCTGATTACCTATTGCTGAAGTCGGAAATTCTCTGATATGTTATAAAGATAGCTATCTAGTATATAAAAAAGTGTCTTGTCCCAAAAAAAGAGTAGATAAAAAACGTGATAAATTGAAGAAGGATAAGGTGTAAAATTTTCAAGATGGTAAAAGTTTGGTTGAATCTTTTGAAAAGAGAGTACGGAAGAAAAATGTTGAGATGAGTTGTCAAGAAGAAAAAATATACCTAAATGACTTGTAGCTCATGCCTTGTTGGCTTAGTGGGCGGGCTTAGATTCAGCTAACATGTCTCAAGTTTGAGGCCATGTGGGTAATGTGGAAGAGGAGTTGGTAAAAAAAGAAGAGAACAAACTCACTAGCCTAGAAAAGGGTATGTTTGACTATGGATTAAAATCAGCAGAAGTTTTACTGCTTTGCTTGATTGAACTGGAAATGATGGAGAGGGCTTGACAAGTTTTGAAGGGAAGTAATGTGCATTCACAACTAAGGAGGACTAGCTGTGGCGCCGAGGTATGTTATTGTCTTGTGTTGAAGCCAGCATTGGTGACCACGGTTCGAGGATTGTTTAAGTGATTTGCTACCTATGGTGAGGGATCCCCAAATATCTCTGATTATCCTATCTCATCCCTTACTCCATCAAGGAAAGGAAAAAACATAATTAGGGAAGCTTTTATGTTTCTATTTTTTACTTTTGGGAAATTTTAATTTTTTACCCTCATACTTAGCCCACTCAGTCAATTTTAACTTTAAAGTTTTAGTTCCATCAAATTAAACTCTCTGCTCGAATAGGTTATAAAATCAATTCCTTCCTTAATATGAAGTTAGAAAAACCAATATATTATTCAAAATCTAACCAACTAAACAACCCAAAGTACTGCTGGAAAAAACTCCCAAACGTCACCCAACTAGAAAACATCCCTGCCCAATAATAAGCAAGTATATATAGAAATAGTATTTCTCCAATCACAAGCACCCACATTTAACATTAAAACTCAAAAGAAAAAAGGGAAAAAAAAGTGACCAACTAGCAGAGGGTTTTAATTTGAATTTCTATTCAGGTTCAATTGAATGAAGTTAGAATTTTAAGATTAAATTTGACTCATTCAGCAAAGTACCTGGGTTAAATTCTGTCTTTTATTAGGAGCAATAAAATATTTCCACCTTTCCATAGATTATGTACATGAGTATGAGTTCCTTGGGTGGATTCTGTTTACTTGTTTATTTCATTGTCATTGTTGTGTGAAGAACACATACTATTATAATCATGGGTCAAAAAATTATTAGTCATCCAGGATTTTACAAGAGAACCAATATGGAGAAATTAGAGTTGCATGGTGGTTGCTTGTCTTCTCATGAATGGGTGTTGGTCTGGAATTTGAAGGGGACCTCTTGTTATGAATGATTGGGAACCCGACCTTATTTTTGTTTTTCAGGTTCTTTATAGGGTGAGTGTGTATATGATGTCCTCTGACTATCATGCATTTCGGTAAACTTCTTACATTTTATGTGAAGAAGTTAGCTGAGAGATTGTGTAGAACTTGTGGCAATATACTTGCTACTTATAATTCAATTCATAACTTAATTTCGTAAAGAAAAAAAAAATTGTTCACACAGTAATTATGAAAAATATGTGCTGCATTTTATTGATTAAAATATATTGGTGAGATTTACTTTATATTAATATTAATATAATATCAGTAATCTAATAGAAATAAACTATGCAAGCCCTATTTTACTGCATTTTTACCGGTATGACATAATTGTTTTGAGCTTCAATTGGAACAGGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCTTATGTTGAATTCCTTGAGCCAGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTTAACATAATCTTTATATATATATTACTTAATTAGTGTTAGTCTAAGATTGGTCTACTGATTTTTCATGCACGTTTTTGGGCAATAATTTAATTTATAAGTATGTTGTAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGGCGATCCAATCCATTTATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCATATTTCTTCTCACCATATGGATACGGGTATGATTATTGAATACAAGTTTCCAATGGAATCTTTCGCTCTCTTCCTAGTCATTTAGCATAGTGTTCTATATCTGTTGCAGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA ATGGAGCACGAAGACGTCGACATGATTGGCTCGGAGTCCAACGATGCTGTGGAGTTGGACGACATGAAGAAACGCTTGAAAGAGATGGAAGATGAAGCTGCTGCCCTTCGCGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCCGTACAAGATCCAGCTAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATTCTCGGTCAGTGTTTGTTGGCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCTTATGTTGAATTCCTTGAGCCAGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGGCGATCCAATCCATTTATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCATATTTCTTCTCACCATATGGATACGGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA ATGGAGCACGAAGACGTCGACATGATTGGCTCGGAGTCCAACGATGCTGTGGAGTTGGACGACATGAAGAAACGCTTGAAAGAGATGGAAGATGAAGCTGCTGCCCTTCGCGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCCGTACAAGATCCAGCTAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATTCTCGGTCAGTGTTTGTTGGCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACTGATAAGTTTGGGCAACCGAAGGGTTATGCTTATGTTGAATTCCTTGAGCCAGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGGCGATCCAATCCATTTATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCATATTTCTTCTCACCATATGGATACGGGAAAGTCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA MEHEDVDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY Homology
BLAST of Lag0019773 vs. NCBI nr
Match: XP_022140995.1 (polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103 Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. NCBI nr
Match: XP_038877304.1 (polyadenylate-binding protein 2-like [Benincasa hispida]) HSP 1 Score: 381.7 bits (979), Expect = 3.8e-102 Identity = 192/197 (97.46%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. NCBI nr
Match: XP_011653388.1 (polyadenylate-binding protein 2 isoform X3 [Cucumis sativus] >KGN53719.1 hypothetical protein Csa_015373 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 3.8e-102 Identity = 192/197 (97.46%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. NCBI nr
Match: XP_008462875.1 (PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo] >KAA0061167.1 polyadenylate-binding protein 2-like isoform X2 [Cucumis melo var. makuwa] >TYK29930.1 polyadenylate-binding protein 2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 381.3 bits (978), Expect = 4.9e-102 Identity = 191/197 (96.95%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. NCBI nr
Match: KAG7014873.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.1 bits (967), Expect = 9.3e-101 Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.7e-76 Identity = 144/192 (75.00%), Postives = 167/192 (86.98%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.4e-75 Identity = 141/192 (73.44%), Postives = 162/192 (84.38%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.6e-63 Identity = 128/187 (68.45%), Postives = 150/187 (80.21%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.6e-34 Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31 Identity = 87/208 (41.83%), Postives = 125/208 (60.10%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy TrEMBL
Match: A0A6J1CGQ3 (polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011513 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104 Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy TrEMBL
Match: A0A0A0KXZ1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G110060 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102 Identity = 192/197 (97.46%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy TrEMBL
Match: A0A5A7V2R3 (Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00160 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102 Identity = 191/197 (96.95%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy TrEMBL
Match: A0A1S3CHX7 (polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102 Identity = 191/197 (96.95%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Lag0019773 vs. ExPASy TrEMBL
Match: A0A1S3CIE7 (polyadenylate-binding protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100 Identity = 191/202 (94.55%), Postives = 197/202 (97.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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