Lag0018888 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGCATGAACAGGAAACGAGCAGAGGCTCTGGGGAATTTGATAGGCAGCTTTGAAGACGTTGACTGGGATGAAGACGACAGAAGGGGAGAAAATTCTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAGTAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTTAAAGACGAATGTGAAAACCAGGTCGACCCAGAGGAAGAACATGATTATGGAGAATGGATGAGAAATATGACGACCCCGACAAGCCCGCATGTCTACAGAACTCCATCTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGTCGAGGAATGAGATCCTACGATTGGCGACAAACTGAACTGAACAATAGAAATCAGAAAAACGAATATCATGGGTCTACTGCCGGAGAAACTGCCGGAAAACAGGTCGGAGACATCAGGGACGACCGGAGCAAAAGCAGAACAGAAGAGACAAGGAAAAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGAGGACAAGACAAAAGGAAAAGAAAGAGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGGAAATACTGAGTAGCCAGACAAACATCACTATCACAAGGGACCAAAACAAGGGAAATCTGAACATAAGAGGGGAGTTGGAAAAAAAAGAAACCTGA ATGGTGTGCATGAACAGGAAACGAGCAGAGGCTCTGGGGAATTTGATAGGCAGCTTTGAAGACGTTGACTGGGATGAAGACGACAGAAGGGGAGAAAATTCTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAGTAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTTAAAGACGAATGTGAAAACCAGGTCGACCCAGAGGAAGAACATGATTATGGAGAATGGATGAGAAATATGACGACCCCGACAAGCCCGCATGTCTACAGAACTCCATCTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGTCGAGGAATGAGATCCTACGATTGGCGACAAACTGAACTGAACAATAGAAATCAGAAAAACGAATATCATGGGTCTACTGCCGGAGAAACTGCCGGAAAACAGGTCGGAGACATCAGGGACGACCGGAGCAAAAGCAGAACAGAAGAGACAAGGAAAAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGAGGACAAGACAAAAGGAAAAGAAAGAGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGGAAATACTGAGTAGCCAGACAAACATCACTATCACAAGGGACCAAAACAAGGGAAATCTGAACATAAGAGGGGAGTTGGAAAAAAAAGAAACCTGA ATGGTGTGCATGAACAGGAAACGAGCAGAGGCTCTGGGGAATTTGATAGGCAGCTTTGAAGACGTTGACTGGGATGAAGACGACAGAAGGGGAGAAAATTCTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAGTAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTTAAAGACGAATGTGAAAACCAGGTCGACCCAGAGGAAGAACATGATTATGGAGAATGGATGAGAAATATGACGACCCCGACAAGCCCGCATGTCTACAGAACTCCATCTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGTCGAGGAATGAGATCCTACGATTGGCGACAAACTGAACTGAACAATAGAAATCAGAAAAACGAATATCATGGGTCTACTGCCGGAGAAACTGCCGGAAAACAGGTCGGAGACATCAGGGACGACCGGAGCAAAAGCAGAACAGAAGAGACAAGGAAAAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGAGGACAAGACAAAAGGAAAAGAAAGAGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGGAAATACTGAGTAGCCAGACAAACATCACTATCACAAGGGACCAAAACAAGGGAAATCTGAACATAAGAGGGGAGTTGGAAAAAAAAGAAACCTGA MVCMNRKRAEALGNLIGSFEDVDWDEDDRRGENSLRLQVKLDITKPLKRGLMIRVGTKAEEAWVKVTYERMPDFCYKCGIIGHVKDECENQVDPEEEHDYGEWMRNMTTPTSPHVYRTPSYRANYGWNKGRGRGRGMRSYDWRQTELNNRNQKNEYHGSTAGETAGKQVGDIRDDRSKSRTEETRKKLESHSSTVPTANKVSEDKTKGKERAGMSEEQRQEKTKDKGKEILSSQTNITITRDQNKGNLNIRGELEKKET Homology
BLAST of Lag0018888 vs. NCBI nr
Match: KAE8772589.1 (hypothetical protein D1007_55405 [Hordeum vulgare]) HSP 1 Score: 101.7 bits (252), Expect = 9.9e-18 Identity = 42/102 (41.18%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of Lag0018888 vs. NCBI nr
Match: XP_039815069.1 (uncharacterized protein LOC120677956 [Panicum virgatum]) HSP 1 Score: 100.5 bits (249), Expect = 2.2e-17 Identity = 57/141 (40.43%), Postives = 76/141 (53.90%), Query Frame = 0
BLAST of Lag0018888 vs. NCBI nr
Match: KAE8782072.1 (hypothetical protein D1007_44590 [Hordeum vulgare]) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-15 Identity = 44/102 (43.14%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Lag0018888 vs. NCBI nr
Match: XP_021656458.1 (uncharacterized protein LOC110647091 [Hevea brasiliensis]) HSP 1 Score: 94.0 bits (232), Expect = 2.1e-15 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0
BLAST of Lag0018888 vs. NCBI nr
Match: CAD6257659.1 (unnamed protein product [Miscanthus lutarioriparius]) HSP 1 Score: 93.2 bits (230), Expect = 3.5e-15 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of Lag0018888 vs. ExPASy TrEMBL
Match: A0A803P614 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.5e-16 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of Lag0018888 vs. ExPASy TrEMBL
Match: A0A803QHU2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.9e-16 Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 0
BLAST of Lag0018888 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.9e-16 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Lag0018888 vs. ExPASy TrEMBL
Match: A0A803Q6Y1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of Lag0018888 vs. ExPASy TrEMBL
Match: A0A803Q028 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|