Lag0018801 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018801
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease h domain
Location	chr5: 34713677 .. 34714279 (+)
RNA-Seq Expression	Lag0018801
Synteny	Lag0018801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCAGAGCTTCTCCGATCAGTTGTGAGAGCTGGTCGAGTCAGGGACCGTGGAGACCCCCTCAGCAAGGTTGGTGGAAGATAAACACGGATGCTTCCTGGTCAGACTCCAAAAAAGCGGGGGGTATCGGGTGGATTGCCCGTGACTCGGGCGGGTCTTTCATCTTCGCCGGAGGAAAAAAAATCAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAACCAAAATTGGTAGGCCTTTCCCGCAGATCCTCATCGAATCAGACTCCTCTGTTGCGATCGCCATTTTGAATCACGAAGCCGAAGAGTTTTCTGAAGCGCGGGTTCTGGCAGACGAAGCAGAGGGATTGGCGCTGGAAGTGGGTTGTGTTTCCTTCTCTTTCAGCCGGCGAGACCAAAATTGTCAAGCGCACAATCTGGCGCGCTTAGTTTATAGCCATAATTTTGATTATGGAATCTGTGAGAATTTTTTGGCCTCTTCCCCTTCAGAAGAGGGATTTTTTTGTTTGGCTGCTTTGCCTCCCTGGTTGGCTTCTTCGATTTACTCGGAGAAAGAAGTGGGTGGTTAG

mRNA sequence

ATGGAGTTCAGAGCTTCTCCGATCAGTTGTGAGAGCTGGTCGAGTCAGGGACCGTGGAGACCCCCTCAGCAAGGTTGGTGGAAGATAAACACGGATGCTTCCTGGTCAGACTCCAAAAAAGCGGGGGGTATCGGGTGGATTGCCCGTGACTCGGGCGGGTCTTTCATCTTCGCCGGAGGAAAAAAAATCAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAACCAAAATTGGTAGGCCTTTCCCGCAGATCCTCATCGAATCAGACTCCTCTGTTGCGATCGCCATTTTGAATCACGAAGCCGAAGAGTTTTCTGAAGCGCGGGTTCTGGCAGACGAAGCAGAGGGATTGGCGCTGGAAGTGGGTTGTGTTTCCTTCTCTTTCAGCCGGCGAGACCAAAATTGTCAAGCGCACAATCTGGCGCGCTTAGTTTATAGCCATAATTTTGATTATGGAATCTGTGAGAATTTTTTGGCCTCTTCCCCTTCAGAAGAGGGATTTTTTTGTTTGGCTGCTTTGCCTCCCTGGTTGGCTTCTTCGATTTACTCGGAGAAAGAAGTGGGTGGTTAG

Coding sequence (CDS)

ATGGAGTTCAGAGCTTCTCCGATCAGTTGTGAGAGCTGGTCGAGTCAGGGACCGTGGAGACCCCCTCAGCAAGGTTGGTGGAAGATAAACACGGATGCTTCCTGGTCAGACTCCAAAAAAGCGGGGGGTATCGGGTGGATTGCCCGTGACTCGGGCGGGTCTTTCATCTTCGCCGGAGGAAAAAAAATCAGCAGAAAGTGGGATATGAAATGCATGGAGTTGAAAGCGATTGTGGAAGGTCTCAGAAGCTTACTAACCAAAATTGGTAGGCCTTTCCCGCAGATCCTCATCGAATCAGACTCCTCTGTTGCGATCGCCATTTTGAATCACGAAGCCGAAGAGTTTTCTGAAGCGCGGGTTCTGGCAGACGAAGCAGAGGGATTGGCGCTGGAAGTGGGTTGTGTTTCCTTCTCTTTCAGCCGGCGAGACCAAAATTGTCAAGCGCACAATCTGGCGCGCTTAGTTTATAGCCATAATTTTGATTATGGAATCTGTGAGAATTTTTTGGCCTCTTCCCCTTCAGAAGAGGGATTTTTTTGTTTGGCTGCTTTGCCTCCCTGGTTGGCTTCTTCGATTTACTCGGAGAAAGAAGTGGGTGGTTAG

Protein sequence

MEFRASPISCESWSSQGPWRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIVEGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFSFSRRDQNCQAHNLARLVYSHNFDYGICENFLASSPSEEGFFCLAALPPWLASSIYSEKEVGG

Homology

[Close]

BLAST of Lag0018801 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 86.3 bits (212), Expect = 3.3e-13
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP    WK+NTDA+W      GGIGWI RD  G  I A  + I  + ++  +E+ AI 
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 79  EGLRSLLTKIGRPFPQ-----ILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVG 138
           EGLR++  +  RP  Q     I +ESDS  AI +L+ + ++ +E   L +E   +  ++ 
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 139 CVSFSFSRRDQNCQAHNLAR 154
            VS     R+ N  AH+LAR
Sbjct: 199 IVSMRHISREANKVAHDLAR 218

[Close]

BLAST of Lag0018801 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-13
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W PP    W +N DASWSDS   GGIGWI R   G  + AG + +    ++K +E  AI+
Sbjct: 71  WEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAIL 130

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
           EGLR+ LT +G   P + IE+DS+   ++LN + E+ ++   + +E   L      ++F+
Sbjct: 131 EGLRN-LTNLGVLRP-LHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFA 190

Query: 139 FSRRDQNCQAHNLAR 154
              R+ N  AH+LA+
Sbjct: 191 KVGRETNGCAHSLAQ 203

[Close]

BLAST of Lag0018801 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-12
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP    WK+NT+A+W      GGIGWI RD  G  I A  + I  + ++  +E+ AI 
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
           EGLR++  +  RP   I +ESDS  AI +L+ + ++ +E   L +E   +  ++  VS  
Sbjct: 139 EGLRAIRQEHCRP---IHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMR 198

Query: 139 FSRRDQNCQAHNLAR 154
              R+ N  AH LAR
Sbjct: 199 HISREANKVAHGLAR 210

[Close]

BLAST of Lag0018801 vs. NCBI nr
Match: MCH81978.1 (ribonuclease H protein [Trifolium medium])

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-11
Identity = 52/139 (37.41%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP QG+ K N DAS+ D+  A G GW  RD  G FI AG   I  + +    E  A+ 
Sbjct: 441 WQPPAQGYLKCNVDASFFDTHDATGWGWCLRDHQGRFILAGSNIIQARLNTIEGEAMAMK 500

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
           E +  L   I R +  ++IESDS + I  +       SE   L    + L L V      
Sbjct: 501 EAISEL---IQRGYSHVIIESDSQIVIEAIFSRRHGSSEFSNLISHIKSLLLLVPNFEVK 560

Query: 139 FSRRDQNCQAHNLARLVYS 158
           F RR  N  AH+LAR  YS
Sbjct: 561 FVRRQANTVAHSLARAAYS 576

[Close]

BLAST of Lag0018801 vs. NCBI nr
Match: XP_028949310.1 (uncharacterized protein LOC114821394 [Malus domestica])

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-11
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W  P  G  K+NTDASW  +    G+GW+ R+  G    AGG  ++        E  AI 
Sbjct: 138 WEKPAFGILKVNTDASWCKNTLRTGVGWVCRNFAGLLHGAGGSGVALCHSAAAGEAAAI- 197

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
               +LL  I   +  ++IESD+ V I ++ HE +       +  + E LA  +  VSFS
Sbjct: 198 --RTALLACINYGYDNVVIESDAKVIIQMIRHEMDHDFSLECILGDIEVLARRLRSVSFS 257

Query: 139 FSRRDQNCQAHNLARLVYSHNFDYG 164
           +  R+ N  AH++A+ V+    +YG
Sbjct: 258 YVPREGNVAAHSVAKFVFKEGREYG 279

[Close]

BLAST of Lag0018801 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP    WK+NTDA+W      GGIGWI RD  G  I A  + I  + ++  +E+ AI 
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 79  EGLRSLLTKIGRPFPQ-----ILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVG 138
           EGLR++  +  RP  Q     I +ESDS  AI +L+ + ++ +E   L +E   +  ++ 
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 139 CVSFSFSRRDQNCQAHNLAR 154
            VS     R+ N  AH+LAR
Sbjct: 199 IVSMRHISREANKVAHDLAR 218

[Close]

BLAST of Lag0018801 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-13
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W PP    W +N DASWSDS   GGIGWI R   G  + AG + +    ++K +E  AI+
Sbjct: 71  WEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAIL 130

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
           EGLR+ LT +G   P + IE+DS+   ++LN + E+ ++   + +E   L      ++F+
Sbjct: 131 EGLRN-LTNLGVLRP-LHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFA 190

Query: 139 FSRRDQNCQAHNLAR 154
              R+ N  AH+LA+
Sbjct: 191 KVGRETNGCAHSLAQ 203

[Close]

BLAST of Lag0018801 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.0e-12
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP    WK+NT+A+W      GGIGWI RD  G  I A  + I  + ++  +E+ AI 
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
           EGLR++  +  RP   I +ESDS  AI +L+ + ++ +E   L +E   +  ++  VS  
Sbjct: 139 EGLRAIRQEHCRP---IHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMR 198

Query: 139 FSRRDQNCQAHNLAR 154
              R+ N  AH LAR
Sbjct: 199 HISREANKVAHGLAR 210

[Close]

BLAST of Lag0018801 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W  P    WK+NTDASWS+ ++ GGIGWI  D  G  + AG  KI  K ++  +EL  I+
Sbjct: 105 WSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIVLAGNCKIREKKEINALELMTII 164

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHE 112
            GL+ +  +   P   I +ESDS   I ++  E
Sbjct: 165 RGLQFINMQSRSP---IYLESDSVEVIRLMKKE 194

[Close]

BLAST of Lag0018801 vs. ExPASy TrEMBL
Match: A0A1J3ELU2 (RNase H domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_TR1531_c2_g1_i1_g.5180 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-09
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W+PP  GW K N D +W+      GIGW+ RDS G  ++ GG+KISR   +    L+  +
Sbjct: 91  WKPPPSGWVKCNVDGTWNKDAVDNGIGWVLRDSKGDVLWIGGRKISRLSSI----LEVEI 150

Query: 79  EGLR-SLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSF 138
           E LR ++L      +  I+ E+DS  A+  L+ + E + + R +  +   L  ++     
Sbjct: 151 EALRWAILVTSNFNYDNIIFETDSKEAVEALSSD-EGWPKLRTITQDIHHLLAKLNHHKI 210

Query: 139 SFSRRDQNCQAHNLARLVYSH-NFD 162
            F  RD N  A  +A+   S+ N+D
Sbjct: 211 IFQPRDGNFVADRIAKESLSNRNYD 230

[Close]

BLAST of Lag0018801 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-12
Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 14  SSQGPWRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCME 73
           SS G WRPP   W K NTDA+W+   +  GIGW+ R+  G   + G + + +   +K + 
Sbjct: 415 SSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPK---LKSV- 474

Query: 74  LKAIVEGLRSLLTKIGR-PFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEV 133
           L+A +E +R  +  + R  +  ++ ESDS V I ILN++ E +   +    + + L  + 
Sbjct: 475 LEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND-EIWPSLKPTIQDLQRLLSQF 534

Query: 134 GCVSFSFSRRDQNCQAHNLARLVYSH-NFD---YGICENFLASS 173
             V F F  R+ N  A  +AR   S  N+D   Y I  ++  SS
Sbjct: 535 TEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSWARSS 573

[Close]

BLAST of Lag0018801 vs. TAIR 10
Match: AT1G27870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 37/136 (27.21%), Postives = 65/136 (47.79%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKC-MELKAI 78
           WR P++GW K N D S+ +       GW+ RDS GS++ A G+ I RK D     E++A+
Sbjct: 52  WRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLA-GQAIGRKVDNALESEIQAL 111

Query: 79  VEGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSF 138
           +  ++   +     + ++  E D+ +   ++N     F     + D    L  +   + F
Sbjct: 112 IISMQHCWS---HGYKRVCFEGDNKMLFDLINGSKVYFGVHNWIRDIHWWLR-KFESIHF 171

Query: 139 SFSRRDQNCQAHNLAR 154
           ++ RR  N  A  LA+
Sbjct: 172 NWIRRHHNTPADILAK 182

[Close]

BLAST of Lag0018801 vs. TAIR 10
Match: AT5G19270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03566.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 50/185 (27.03%), Postives = 79/185 (42.70%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAI- 78
           W PP  G  K N +A W ++    G+ WIARD  G  ++      +R  +    EL+ I 
Sbjct: 61  WTPPDFGIVKCNVNAHWGNADMMSGVAWIARDVNGLALYHARDAFTRSSNRIMAELRCIL 120

Query: 79  --VEGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCV 138
             V+ LR L  +       ++I SD   AIA L +   ++    +  D      + + C 
Sbjct: 121 WVVKSLRDLRLQ------NVIISSDCQAAIAAL-YNPRDWPRYAMWLD-----TIFIACQ 180

Query: 139 SFSFSRRD-QNCQAHNLARLVYSHNFDYGICENFLASSPSEEGFFCLAALPPWLASSIYS 198
           SF F   +  +C A+++AR +       G    +L    SE G       P WL + + S
Sbjct: 181 SFPFIIFELVSCPANSIARDIAESVTRDGRFNPYL----SEGG-------PVWLLNRLRS 222

Query: 199 EKEVG 200
           E + G
Sbjct: 241 EAQRG 222

[Close]

BLAST of Lag0018801 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 37/155 (23.87%), Postives = 65/155 (41.94%), Query Frame = 0


Query: 19  WRPPQQGWWKINTDASWSDSKKAGGIGWIARDSGGSFIFAGGKKISRKWDMKCMELKAIV 78
           W PP +   K N DAS  +     G+GWI R+S G+ I  G  K   +   +  E   ++
Sbjct: 105 WSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLI 164

Query: 79  EGLRSLLTKIGRPFPQILIESDSSVAIAILNHEAEEFSEARVLADEAEGLALEVGCVSFS 138
             +++     G    +++ E D+     ++N ++      +   D  +        + FS
Sbjct: 165 WAIQA---SYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEFS 224

Query: 139 FSRRDQNCQAHNLARLVYSHNFDYGI---CENFLA 171
           F  R+QN  A  LA+     N  + +   C  FL+
Sbjct: 225 FKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLS 255

The following BLAST results are available for this feature:

BLAST of Lag0018801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156777.1	3.3e-13	37.14	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_022155262.1	5.7e-13	37.04	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143535.1	2.2e-12	37.04	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
MCH81978.1	4.1e-11	37.41	ribonuclease H protein [Trifolium medium]	[more]
XP_028949310.1	4.1e-11	32.41	uncharacterized protein LOC114821394 [Malus domestica]	[more]

BLAST of Lag0018801 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0018801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSV1	1.6e-13	37.14	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DNV9	2.8e-13	37.04	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CP26	1.0e-12	37.04	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1CQG0	1.4e-09	39.78	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A1J3ELU2	1.8e-09	31.72	RNase H domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_TR1531...	[more]

BLAST of Lag0018801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	3.0e-12	32.32	Ribonuclease H-like superfamily protein	[more]
AT1G27870.1	1.1e-06	27.21	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G19270.1	2.5e-06	27.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65005.1	3.2e-06	23.87	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 30..154 e-value: 3.5E-17 score: 62.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 25..156 e-value: 5.5E-15 score: 57.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 18..159
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 29..153 e-value: 1.93417E-20 score: 80.436
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 25..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018801.1	Lag0018801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity