Lag0017923 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGATCCTCCTAGAGTGAGATTCGAACTAGATCCAGAAATTGAAAGGACATTCAGAAGGAGAAGGAGGGAGCAGCGAAGGAACATCAATCCAATGGATGACCCTCTACATCTTCCAGATATTCCAGAAGATCAAGTTGATCCCCAGCAAAATTGTGTGTTGCAGCAAAATCAATTGCTGGAGTAAAATGGACAGCAAAATAACCAGGCTGAGAACCCTATTTTGGTAGCGAATGATAGGACCAGAGCCATTCAAGCGTATGCTTTCCCGATGTTTGATGAGTTAAATCCAGGAATTGTGCGTCCTCAAATTGAGGCAGCAAATTTTGAAATAAAATCGATAATGTTTCAGATGTTACAGACCGTGGGTCAATTCCATGGTTTACCATATGAAGACCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTTATTCATTTGTGATTCAGGGAGTGTCAAGAGAATCAGCATCGAGTCATGACTGCAACATCAGTTGTCGTCGTGACGAAGTTACCTTGGTATGCAGTTATAAGGAAGTGCCAACGGTGGTATTAGTGTCATCTCGTAGCTATTCTTGAAGGGATGGTTTGAAAAGGTGAGTTGGCGCAGCGGAAGCCGTTTCGAAGTAGTTGTTTCCATCTTCAGTGATGCCTGTTTGAAGTTGGTGGTTGAACTTACCAACTAAGTGGGTTTAAGTTGGTGAAGTTGCTGATGAAGCTTCCTGTAGGTTGGAGTTGTGTTAAGTCGTTGATGCTAAGTTGTAAAGTGTTTAGCTCAAGGTTTAAGCTGGCATTGACAACCTATGTGGAGTAAGTAGCATCAGCGAATAGAAGTTTCTTGTAGGTCGTGCAAGATCGGAGTTTGGATTCAATCTTGATAGGCCGTTTGAATTCTTGGAGTGTGTAGTCAGGTTGCTCGTAAGCAAGATTTGCTTCAAGTGTTGTATGTTCAACATGACTTGTCTCAAGAGTTGTGGTTATGCATACACATCACCTATTCCTCTTGTGCCTCAGTTTTAAGCTTTGGGATCCTAGAGGAAATGGTTCGGTGAGCAAAAGCCTCTGGTATTAAGTTTGTGGAGCATGAGTTGGAATCAAGGCCAGTCCACCAGTGTGGTTAGGCAAGCACTTTCGAGAATTTGGAGTTCAGTGTTGGTGATCGTGTGTTTTGCACGTGATGTCAATGAAAAGACTTCTTTGCTTGTTGATAGGAAGCTTAACCTGGGTTCATTGGACGAGATGAGATCAGGGAGCGCATCGAGCCTGTTGCTTACAGGTTGA ATGAGCGATCCTCCTAGAGTGAGATTCGAACTAGATCCAGAAATTGAAAGGACATTCAGAAGGAGAAGGAGGGAGCAGCGAAGGAACATCAATCCAATGGATGACCCTCTACATCTTCCAGATATTCCAGAAGATCAAGTTGATCCCCAGCAAAATTCGAATGATAGGACCAGAGCCATTCAAGCGTATGCTTTCCCGATGTTTGATGAGTTAAATCCAGGAATTGTGCGTCCTCAAATTGAGGCAGCAAATTTTGAAATAAAATCGATAATGTTTCAGATGTTACAGACCGTGGGTCAATTCCATGGTTTACCATATGAAGACCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTTATTCATTTGTGATTCAGGGAGTGTCAAGAGAATCAGCATCGAGTCATGACTGCAACATCAGTTGTCGTCGTGACGAAGTTACCTTGTTGCTGATGAAGCTTCCTGTAGGTTGGAGTTGTGTTAAGTCGTTGATGCTAAGTTGTAAAGTGTTTAGCTCAAGGTTTAAGCTGGCATTGACAACCTATGTGGATCAGGTTGCTCGTAAGCAAGATTTGCTTCAAGTGTTGTATGTTCAACATGACTTGTCTCAAGAGTTGTGGTTATGCATACACATCACCTATTCCTCTTGTGCCTCAGTTTTAAGCTTTGGGATCCTAGAGGAAATGGTTCGGAAGCTTAACCTGGGTTCATTGGACGAGATGAGATCAGGGAGCGCATCGAGCCTGTTGCTTACAGGTTGA ATGAGCGATCCTCCTAGAGTGAGATTCGAACTAGATCCAGAAATTGAAAGGACATTCAGAAGGAGAAGGAGGGAGCAGCGAAGGAACATCAATCCAATGGATGACCCTCTACATCTTCCAGATATTCCAGAAGATCAAGTTGATCCCCAGCAAAATTCGAATGATAGGACCAGAGCCATTCAAGCGTATGCTTTCCCGATGTTTGATGAGTTAAATCCAGGAATTGTGCGTCCTCAAATTGAGGCAGCAAATTTTGAAATAAAATCGATAATGTTTCAGATGTTACAGACCGTGGGTCAATTCCATGGTTTACCATATGAAGACCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTTATTCATTTGTGATTCAGGGAGTGTCAAGAGAATCAGCATCGAGTCATGACTGCAACATCAGTTGTCGTCGTGACGAAGTTACCTTGTTGCTGATGAAGCTTCCTGTAGGTTGGAGTTGTGTTAAGTCGTTGATGCTAAGTTGTAAAGTGTTTAGCTCAAGGTTTAAGCTGGCATTGACAACCTATGTGGATCAGGTTGCTCGTAAGCAAGATTTGCTTCAAGTGTTGTATGTTCAACATGACTTGTCTCAAGAGTTGTGGTTATGCATACACATCACCTATTCCTCTTGTGCCTCAGTTTTAAGCTTTGGGATCCTAGAGGAAATGGTTCGGAAGCTTAACCTGGGTTCATTGGACGAGATGAGATCAGGGAGCGCATCGAGCCTGTTGCTTACAGGTTGA MSDPPRVRFELDPEIERTFRRRRREQRRNINPMDDPLHLPDIPEDQVDPQQNSNDRTRAIQAYAFPMFDELNPGIVRPQIEAANFEIKSIMFQMLQTVGQFHGLPYEDPHLHLKSFLGVSYSFVIQGVSRESASSHDCNISCRRDEVTLLLMKLPVGWSCVKSLMLSCKVFSSRFKLALTTYVDQVARKQDLLQVLYVQHDLSQELWLCIHITYSSCASVLSFGILEEMVRKLNLGSLDEMRSGSASSLLLTG Homology
BLAST of Lag0017923 vs. NCBI nr
Match: XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa]) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-28 Identity = 71/123 (57.72%), Postives = 94/123 (76.42%), Query Frame = 0
BLAST of Lag0017923 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata]) HSP 1 Score: 129.4 bits (324), Expect = 4.3e-26 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of Lag0017923 vs. NCBI nr
Match: XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus]) HSP 1 Score: 127.5 bits (319), Expect = 1.6e-25 Identity = 92/233 (39.48%), Postives = 124/233 (53.22%), Query Frame = 0
BLAST of Lag0017923 vs. NCBI nr
Match: XP_017239618.1 (PREDICTED: uncharacterized protein LOC108212402 [Daucus carota subsp. sativus]) HSP 1 Score: 125.9 bits (315), Expect = 4.8e-25 Identity = 84/200 (42.00%), Postives = 110/200 (55.00%), Query Frame = 0
BLAST of Lag0017923 vs. NCBI nr
Match: ERM93404.1 (hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]) HSP 1 Score: 122.5 bits (306), Expect = 5.3e-24 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Lag0017923 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.1e-26 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of Lag0017923 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-24 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Lag0017923 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 7.5e-24 Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of Lag0017923 vs. ExPASy TrEMBL
Match: U5CUK7 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s03373p00007640 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22 Identity = 55/88 (62.50%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of Lag0017923 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.4e-22 Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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