Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA
mRNA sequence
ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA
Coding sequence (CDS)
ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA
Protein sequence
MDSKRPSNAAIFLVLNLVFFAFVNVCHACDGSPKPKPNPNPTPVVKSCPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA
Homology
BLAST of Lag0017524 vs. NCBI nr
Match:
XP_022943183.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])
HSP 1 Score: 247.3 bits (630), Expect = 7.4e-62
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACD-----GSPKPKPNPNPTPVVKSCPRDALKL 60
MDSKR SNAAIFLVLNLVFFAFVNVCHACD PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1 MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKSKPKPYPNPNPTPVVKSCPRDALKL 60
Query: 61 GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISLSL
Sbjct: 61 GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISLSL 120
Query: 121 LVNVCGKKVPPEFQCA 132
LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136
BLAST of Lag0017524 vs. NCBI nr
Match:
XP_023540191.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-----SPKPKPNPNPTPVVKSCPRDALKL 60
MDSKR SNAAIFLVLNLVFFAFVNVCHACD PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1 MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKPKPKPYPNPNPTPVVKSCPRDALKL 60
Query: 61 GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISLSL
Sbjct: 61 GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISLSL 120
Query: 121 LVNVCGKKVPPEFQCA 132
LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136
BLAST of Lag0017524 vs. NCBI nr
Match:
XP_023005594.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])
HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 122/138 (88.41%), Postives = 125/138 (90.58%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-------SPKPKPNPNPTPVVKSCPRDAL 60
MDSKR SNAAIFLVLNLVFFAFVNVCHACD PKP PNPNPTPVVKSCPRDAL
Sbjct: 1 MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKPKPKPKPYPNPNPTPVVKSCPRDAL 60
Query: 61 KLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISL 120
KLGVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISL
Sbjct: 61 KLGVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISL 120
Query: 121 SLLVNVCGKKVPPEFQCA 132
SLLVNVCGKKVP EFQCA
Sbjct: 121 SLLVNVCGKKVPSEFQCA 138
BLAST of Lag0017524 vs. NCBI nr
Match:
XP_004150818.1 (14 kDa proline-rich protein DC2.15 [Cucumis sativus] >KGN55887.1 hypothetical protein Csa_010489 [Cucumis sativus])
HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 121/136 (88.97%), Postives = 125/136 (91.91%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-----SPKPKPNPNPTPVVKSCPRDALKL 60
MDSKR SNA IFLVLNLVFFAFVNVCHAC+ +PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1 MDSKRISNATIFLVLNLVFFAFVNVCHACNDPKPKPTPKPYPNPNPTPVVKSCPRDALKL 60
Query: 61 GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKANVLG+NINIPISLSL
Sbjct: 61 GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANVLGININIPISLSL 120
Query: 121 LVNVCGKKVPPEFQCA 132
LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136
BLAST of Lag0017524 vs. NCBI nr
Match:
XP_038906017.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])
HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 121/138 (87.68%), Postives = 124/138 (89.86%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-------SPKPKPNPNPTPVVKSCPRDAL 60
MDSKR SNAAIFLVLNLVFFAFVNVCHAC+ P P PNPNPTPVVKSCPRDAL
Sbjct: 1 MDSKRTSNAAIFLVLNLVFFAFVNVCHACNDPKPKPSPKPYPNPNPNPTPVVKSCPRDAL 60
Query: 61 KLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISL 120
KLGVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKANVLG+NINIPISL
Sbjct: 61 KLGVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANVLGININIPISL 120
Query: 121 SLLVNVCGKKVPPEFQCA 132
SLLVNVCGKKVP EFQCA
Sbjct: 121 SLLVNVCGKKVPSEFQCA 138
BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match:
P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.5e-36
Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG--SPKPKPNPNPTPV----VKSCPRDALK 60
M SK ++ A+F LN++FFA V+ C PKPKP P PTP CPRDALK
Sbjct: 1 MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60
Query: 61 LGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLS 120
LGVCA +LN + ++GS P CCS+L+GL++LEAAVCLCTAIKAN+LG N+N+PI+LS
Sbjct: 61 LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120
Query: 121 LLVNVCGKKVPPEFQC 131
L++N CGK+VP F+C
Sbjct: 121 LVLNNCGKQVPNGFEC 136
BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match:
Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 71/161 (44.10%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK--------------------PNP 60
M SK ++ A+F LN++FF + C SPKPK P+P
Sbjct: 1 MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60
Query: 61 NPTPVV---------KSCPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEA 120
NP PV SCP DALKLGVCA +L+ ++ +G + QCCS++ GL+D++A
Sbjct: 61 NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120
Query: 121 AVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
A+CLCTA++ANVLG+N+N+PISLS+L+NVC +K+P FQCA
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQCA 161
BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match:
Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 69/177 (38.98%), Postives = 100/177 (56.50%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK----------------------- 60
M SK ++ A+F LN++FF C+ SPKP+
Sbjct: 1 MASKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVP 60
Query: 61 --------------PNPNPTPVVK--------SCPRDALKLGVCAKLLNGPVSALVGSLP 120
P+PNPTPV +CP DAL+LGVCA +L+G ++ +G
Sbjct: 61 TPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS 120
Query: 121 NTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
CCS++ GL+DL+AA+CLCTA++ANVLG+N+N+PISLS+L+NVC +++P +FQCA
Sbjct: 121 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQCA 177
BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match:
Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 70/168 (41.67%), Postives = 96/168 (57.14%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCH-ACDGSPK--------------PKPNPNPTPVV 60
M SK ++ A+F LN++FF C+ SPK PKP P P+P V
Sbjct: 1 MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60
Query: 61 KS----------------------CPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLD 120
S CP DAL+LGVCA +L+ ++ +G CCS++
Sbjct: 61 PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120
Query: 121 GLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
GL+DL+AA+CLCTA++ANVLG+N+N+PISLS+L+NVC +KVP FQCA
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQCA 168
BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match:
Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 70/182 (38.46%), Postives = 101/182 (55.49%), Query Frame = 0
Query: 1 MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK----------------------- 60
M SK ++ A+F LN++FF + C+ SPKP+
Sbjct: 1 MASKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVP 60
Query: 61 -------------------PNPNPTPVVK--------SCPRDALKLGVCAKLLNGPVSAL 120
P+PNPTPV+ +CP DAL+LGVCA +L+G ++
Sbjct: 61 TPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQ 120
Query: 121 VGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQ 132
+G CCS++ GL+DL+AAVCLCTA++ANVLG+N+N+PISLS+L+NVC +++P FQ
Sbjct: 121 LGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQ 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022943183.1 | 7.4e-62 | 89.71 | 14 kDa proline-rich protein DC2.15-like [Cucurbita moschata] | [more] |
XP_023540191.1 | 9.7e-62 | 89.71 | 14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo] | [more] |
XP_023005594.1 | 1.6e-61 | 88.41 | 14 kDa proline-rich protein DC2.15-like [Cucurbita maxima] | [more] |
XP_004150818.1 | 1.1e-60 | 88.97 | 14 kDa proline-rich protein DC2.15 [Cucumis sativus] >KGN55887.1 hypothetical pr... | [more] |
XP_038906017.1 | 1.8e-60 | 87.68 | 14 kDa proline-rich protein DC2.15-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
P14009 | 1.5e-36 | 55.15 | 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 | [more] |
Q9SU35 | 1.1e-31 | 44.10 | pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... | [more] |
Q9SU33 | 1.0e-29 | 38.98 | pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125... | [more] |
Q39176 | 2.9e-29 | 41.67 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... | [more] |
Q9SU34 | 2.9e-29 | 38.46 | pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124... | [more] |