Lag0017524 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017524
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Locationchr5: 4870513 .. 4870908 (+)
RNA-Seq ExpressionLag0017524
SyntenyLag0017524
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA

mRNA sequence

ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA

Coding sequence (CDS)

ATGGATTCTAAAAGACCTTCAAATGCTGCCATCTTTCTTGTCCTCAACCTTGTGTTCTTTGCCTTTGTTAACGTATGCCACGCCTGCGACGGATCGCCGAAGCCGAAGCCTAACCCTAACCCTACTCCGGTAGTCAAGAGCTGCCCTAGAGATGCCCTAAAGCTTGGCGTGTGCGCGAAGCTGCTAAATGGACCGGTCAGTGCACTCGTCGGGTCCTTGCCGAACACGCAATGCTGCTCGGTGCTCGACGGGCTTATCGACCTCGAGGCAGCGGTATGTCTTTGCACAGCCATCAAAGCCAACGTTCTTGGTCTCAACATTAACATTCCCATTTCTTTGAGCTTGCTTGTCAACGTCTGTGGAAAGAAGGTTCCCCCTGAATTCCAGTGTGCTTAA

Protein sequence

MDSKRPSNAAIFLVLNLVFFAFVNVCHACDGSPKPKPNPNPTPVVKSCPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA
Homology
BLAST of Lag0017524 vs. NCBI nr
Match: XP_022943183.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])

HSP 1 Score: 247.3 bits (630), Expect = 7.4e-62
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACD-----GSPKPKPNPNPTPVVKSCPRDALKL 60
           MDSKR SNAAIFLVLNLVFFAFVNVCHACD       PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1   MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKSKPKPYPNPNPTPVVKSCPRDALKL 60

Query: 61  GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
           GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISLSL
Sbjct: 61  GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISLSL 120

Query: 121 LVNVCGKKVPPEFQCA 132
           LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136

BLAST of Lag0017524 vs. NCBI nr
Match: XP_023540191.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-----SPKPKPNPNPTPVVKSCPRDALKL 60
           MDSKR SNAAIFLVLNLVFFAFVNVCHACD       PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1   MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKPKPKPYPNPNPTPVVKSCPRDALKL 60

Query: 61  GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
           GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISLSL
Sbjct: 61  GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISLSL 120

Query: 121 LVNVCGKKVPPEFQCA 132
           LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136

BLAST of Lag0017524 vs. NCBI nr
Match: XP_023005594.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 122/138 (88.41%), Postives = 125/138 (90.58%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-------SPKPKPNPNPTPVVKSCPRDAL 60
           MDSKR SNAAIFLVLNLVFFAFVNVCHACD         PKP PNPNPTPVVKSCPRDAL
Sbjct: 1   MDSKRTSNAAIFLVLNLVFFAFVNVCHACDDHAPKPKPKPKPYPNPNPTPVVKSCPRDAL 60

Query: 61  KLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISL 120
           KLGVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKAN+LG+NINIPISL
Sbjct: 61  KLGVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANILGININIPISL 120

Query: 121 SLLVNVCGKKVPPEFQCA 132
           SLLVNVCGKKVP EFQCA
Sbjct: 121 SLLVNVCGKKVPSEFQCA 138

BLAST of Lag0017524 vs. NCBI nr
Match: XP_004150818.1 (14 kDa proline-rich protein DC2.15 [Cucumis sativus] >KGN55887.1 hypothetical protein Csa_010489 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 121/136 (88.97%), Postives = 125/136 (91.91%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-----SPKPKPNPNPTPVVKSCPRDALKL 60
           MDSKR SNA IFLVLNLVFFAFVNVCHAC+      +PKP PNPNPTPVVKSCPRDALKL
Sbjct: 1   MDSKRISNATIFLVLNLVFFAFVNVCHACNDPKPKPTPKPYPNPNPTPVVKSCPRDALKL 60

Query: 61  GVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSL 120
           GVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKANVLG+NINIPISLSL
Sbjct: 61  GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANVLGININIPISLSL 120

Query: 121 LVNVCGKKVPPEFQCA 132
           LVNVCGKKVP EFQCA
Sbjct: 121 LVNVCGKKVPSEFQCA 136

BLAST of Lag0017524 vs. NCBI nr
Match: XP_038906017.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 121/138 (87.68%), Postives = 124/138 (89.86%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG-------SPKPKPNPNPTPVVKSCPRDAL 60
           MDSKR SNAAIFLVLNLVFFAFVNVCHAC+         P P PNPNPTPVVKSCPRDAL
Sbjct: 1   MDSKRTSNAAIFLVLNLVFFAFVNVCHACNDPKPKPSPKPYPNPNPNPTPVVKSCPRDAL 60

Query: 61  KLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISL 120
           KLGVC KLLNGPVSALVGSLPNTQCCS+LDGLIDLEAAVCLCTAIKANVLG+NINIPISL
Sbjct: 61  KLGVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANVLGININIPISL 120

Query: 121 SLLVNVCGKKVPPEFQCA 132
           SLLVNVCGKKVP EFQCA
Sbjct: 121 SLLVNVCGKKVPSEFQCA 138

BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-36
Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHACDG--SPKPKPNPNPTPV----VKSCPRDALK 60
           M SK  ++ A+F  LN++FFA V+    C     PKPKP P PTP        CPRDALK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 61  LGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLS 120
           LGVCA +LN   + ++GS P   CCS+L+GL++LEAAVCLCTAIKAN+LG N+N+PI+LS
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120

Query: 121 LLVNVCGKKVPPEFQC 131
           L++N CGK+VP  F+C
Sbjct: 121 LVLNNCGKQVPNGFEC 136

BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 71/161 (44.10%), Postives = 99/161 (61.49%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK--------------------PNP 60
           M SK  ++ A+F  LN++FF      +  C  SPKPK                    P+P
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  NPTPVV---------KSCPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLDGLIDLEA 120
           NP PV           SCP DALKLGVCA +L+  ++  +G   + QCCS++ GL+D++A
Sbjct: 61  NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120

Query: 121 AVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
           A+CLCTA++ANVLG+N+N+PISLS+L+NVC +K+P  FQCA
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQCA 161

BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 69/177 (38.98%), Postives = 100/177 (56.50%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK----------------------- 60
           M SK  ++ A+F  LN++FF         C+ SPKP+                       
Sbjct: 1   MASKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVP 60

Query: 61  --------------PNPNPTPVVK--------SCPRDALKLGVCAKLLNGPVSALVGSLP 120
                         P+PNPTPV          +CP DAL+LGVCA +L+G ++  +G   
Sbjct: 61  TPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS 120

Query: 121 NTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
              CCS++ GL+DL+AA+CLCTA++ANVLG+N+N+PISLS+L+NVC +++P +FQCA
Sbjct: 121 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQCA 177

BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 70/168 (41.67%), Postives = 96/168 (57.14%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCH-ACDGSPK--------------PKPNPNPTPVV 60
           M SK  ++ A+F  LN++FF         C+ SPK              PKP P P+P V
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  KS----------------------CPRDALKLGVCAKLLNGPVSALVGSLPNTQCCSVLD 120
            S                      CP DAL+LGVCA +L+  ++  +G      CCS++ 
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQCA 132
           GL+DL+AA+CLCTA++ANVLG+N+N+PISLS+L+NVC +KVP  FQCA
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQCA 168

BLAST of Lag0017524 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 70/182 (38.46%), Postives = 101/182 (55.49%), Query Frame = 0

Query: 1   MDSKRPSNAAIFLVLNLVFFAFVNVCHA-CDGSPKPK----------------------- 60
           M SK  ++ A+F  LN++FF      +  C+ SPKP+                       
Sbjct: 1   MASKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVP 60

Query: 61  -------------------PNPNPTPVVK--------SCPRDALKLGVCAKLLNGPVSAL 120
                              P+PNPTPV+         +CP DAL+LGVCA +L+G ++  
Sbjct: 61  TPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQ 120

Query: 121 VGSLPNTQCCSVLDGLIDLEAAVCLCTAIKANVLGLNINIPISLSLLVNVCGKKVPPEFQ 132
           +G      CCS++ GL+DL+AAVCLCTA++ANVLG+N+N+PISLS+L+NVC +++P  FQ
Sbjct: 121 LGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNFQ 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022943183.17.4e-6289.7114 kDa proline-rich protein DC2.15-like [Cucurbita moschata][more]
XP_023540191.19.7e-6289.7114 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo][more]
XP_023005594.11.6e-6188.4114 kDa proline-rich protein DC2.15-like [Cucurbita maxima][more]
XP_004150818.11.1e-6088.9714 kDa proline-rich protein DC2.15 [Cucumis sativus] >KGN55887.1 hypothetical pr... [more]
XP_038906017.11.8e-6087.6814 kDa proline-rich protein DC2.15-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
P140091.5e-3655.1514 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1[more]
Q9SU351.1e-3144.10pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... [more]
Q9SU331.0e-2938.98pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125... [more]
Q391762.9e-2941.67Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... [more]
Q9SU342.9e-2938.46pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 48..130
e-value: 1.1E-8
score: 44.8
IPR027923Hydrophobic seed protein domainPFAMPF14547Hydrophob_seedcoord: 48..131
e-value: 3.8E-23
score: 81.5
IPR027923Hydrophobic seed protein domainCDDcd01958HPS_likecoord: 45..130
e-value: 2.02549E-26
score: 92.3916
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 46..131
e-value: 2.0E-28
score: 100.0
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 50..130
NoneNo IPR availablePANTHERPTHR31731:SF8BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 7..130
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 7..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017524.1Lag0017524.1mRNA