Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCACTAAAGCTTTCTCCTTTGGTTTCCTCTTGCTGGTGGGTTTAGGATTAGCTTCGGCTACTAGAACCCTTCTCTCTTATGATCCTCCACATCACTCAGATGTAGGATATGGATACGAACGTCCTGTACATAACCCAAAAGTAGGGTATGAACGTGATCATCACGATGGACCTTATGGTGCATACGGTGGTGGTTCTGGCGGAGGATATGGAGGCGGAGCTGGCTCTGCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGCGGAGGAGGTGGCTCTGGATATGCAGGTGTAGGAGATCATGGGGCTGGCTATGGCAACGGTGGAGATCATGGATATGGCGTTGACCTTGGAGGTAGTGGATATGGAAGTGGTGGCGGCGGAGGAAGTGGTGTAGGATATGGAGATCTAGGAGGACATGGAAAAGGCTACGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAAATCCGATCATGGAGTTGGTTATGGTAGCGGTGGAGGTGGAGGTTATGGAAGTGGAGGGGGAGCTGGATATGGTCCAGGAGGAGATCATGGTGTTGGCTATGGGAGCGGAGGAGGGGGTGGGTCTGGTAGTGGTTATGGTGGTGGAGCCAAAGGATATGGAGGAGGAAGCGGTGGCGGCGGTGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGGAGTGGGGGTGGCGGCGGAAGTGGCTATGGAGGCGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
mRNA sequence
ATGGCTATCACTAAAGCTTTCTCCTTTGGTTTCCTCTTGCTGGTGGGTTTAGGATTAGCTTCGGCTACTAGAACCCTTCTCTCTTATGATCCTCCACATCACTCAGATGTAGGATATGGATACGAACGTCCTGTACATAACCCAAAAGTAGGGTATGAACGTGATCATCACGATGGACCTTATGGTGCATACGGTGGTGGTTCTGGCGGAGGATATGGAGGCGGAGCTGGCTCTGCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGCGGAGGAGGTGGCTCTGGATATGCAGGTGTAGGAGATCATGGGGCTGGCTATGGCAACGGTGGAGATCATGGATATGGCGTTGACCTTGGAGGTAGTGGATATGGAAGTGGTGGCGGCGGAGGAAGTGGTGTAGGATATGGAGATCTAGGAGGACATGGAAAAGGCTACGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAAATCCGATCATGGAGTTGGTTATGGTAGCGGTGGAGGTGGAGGTTATGGAAGTGGAGGGGGAGCTGGATATGGTCCAGGAGGAGATCATGGTGTTGGCTATGGGAGCGGAGGAGGGGGTGGGTCTGGTAGTGGTTATGGTGGTGGAGCCAAAGGATATGGAGGAGGAAGCGGTGGCGGCGGTGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGGAGTGGGGGTGGCGGCGGAAGTGGCTATGGAGGCGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Coding sequence (CDS)
ATGGCTATCACTAAAGCTTTCTCCTTTGGTTTCCTCTTGCTGGTGGGTTTAGGATTAGCTTCGGCTACTAGAACCCTTCTCTCTTATGATCCTCCACATCACTCAGATGTAGGATATGGATACGAACGTCCTGTACATAACCCAAAAGTAGGGTATGAACGTGATCATCACGATGGACCTTATGGTGCATACGGTGGTGGTTCTGGCGGAGGATATGGAGGCGGAGCTGGCTCTGCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGCGGAGGAGGTGGCTCTGGATATGCAGGTGTAGGAGATCATGGGGCTGGCTATGGCAACGGTGGAGATCATGGATATGGCGTTGACCTTGGAGGTAGTGGATATGGAAGTGGTGGCGGCGGAGGAAGTGGTGTAGGATATGGAGATCTAGGAGGACATGGAAAAGGCTACGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAAATCCGATCATGGAGTTGGTTATGGTAGCGGTGGAGGTGGAGGTTATGGAAGTGGAGGGGGAGCTGGATATGGTCCAGGAGGAGATCATGGTGTTGGCTATGGGAGCGGAGGAGGGGGTGGGTCTGGTAGTGGTTATGGTGGTGGAGCCAAAGGATATGGAGGAGGAAGCGGTGGCGGCGGTGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGGAGTGGGGGTGGCGGCGGAAGTGGCTATGGAGGCGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Protein sequence
MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGPYGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAGYGNGGDHGYGVDLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGYGSGGGGGSGYGGGEEGGYDGGYAP
Homology
BLAST of Lag0017301 vs. NCBI nr
Match:
XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 272.3 bits (695), Expect = 4.2e-69
Identity = 220/263 (83.65%), Postives = 228/263 (86.69%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYD-PPHHSDVGY-GYERPVHNPKVGYERDHHD 60
MAI + SFGFLLLVGLGLASATR LLSYD PPH S GY Y+ PVHNPKVGYERDHHD
Sbjct: 9 MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRS--GYDNYDHPVHNPKVGYERDHHD 68
Query: 61 GPYGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAGYGNGGDHGYGV- 120
GP YGGG+GGGYGGGAGS+LGGSGYGS GGGGGSGYAG GDHG GYG+GG GYG
Sbjct: 69 GP---YGGGAGGGYGGGAGSSLGGSGYGS--GGGGGSGYAGAGDHGVGYGSGGGGGYGAG 128
Query: 121 ---DLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGGGY 180
DLGGSGYGSGGGGGSG GYGDLGGHGKGYGSGGGGGSGYGG+ DHGVGYGSGGGGGY
Sbjct: 129 VGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGY 188
Query: 181 GSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGYGS 240
GSGGGAGYGPG +HGVGYGSGGGGGSGSGY GG+KGYGGGSGGGGGAGYGGGAH GS
Sbjct: 189 GSGGGAGYGPGVEHGVGYGSGGGGGSGSGY-GGSKGYGGGSGGGGGAGYGGGAH----GS 248
Query: 241 GGGGGSGYGG-GEEGGYDGGYAP 257
GGG GSGYGG GEEGGYDGGYAP
Sbjct: 249 GGGAGSGYGGSGEEGGYDGGYAP 259
BLAST of Lag0017301 vs. NCBI nr
Match:
XP_023539508.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] >XP_023539510.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 269.2 bits (687), Expect = 3.6e-68
Identity = 212/261 (81.23%), Postives = 222/261 (85.06%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGP 60
MAI+K+ S FLLL+GLGLASA RTLLSYDPPHHSDVGYGY+ HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ---HNPRVGYDHDHHDGP 60
Query: 61 YGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGD-HGAGYGNGGDHGYGV-- 120
YGAYGGGSGGGYG GAGSALGGSGYGSGGGGGGGSGYAGVGD G+GYG+GG G GV
Sbjct: 61 YGAYGGGSGGGYGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGVGY 120
Query: 121 -DLG--GSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGGGY 180
DLG G GYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGG +DHGVGYGSGGGGGY
Sbjct: 121 GDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGY 180
Query: 181 GSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGYGS 240
G+GGGAGYGPGGD GVGYGSGGGGGSG GYGGGAK GYGGGA GSGYGS
Sbjct: 181 GAGGGAGYGPGGDRGVGYGSGGGGGSGGGYGGGAK------------GYGGGAKGSGYGS 240
Query: 241 GGGGGSGYGG-GEEGGYDGGY 255
GGG GSGYGG G EGGYDGGY
Sbjct: 241 GGGAGSGYGGVGGEGGYDGGY 246
BLAST of Lag0017301 vs. NCBI nr
Match:
XP_023005512.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima])
HSP 1 Score: 268.5 bits (685), Expect = 6.1e-68
Identity = 216/264 (81.82%), Postives = 226/264 (85.61%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGP 60
MAI+K+ S FLLL+GLGLASA RTLLSYDPPHHSDVGYGY+ HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ---HNPRVGYDHDHHDGP 60
Query: 61 YGAYGGGSGGGY--GGGAGSALGGSGYGSGGGGGGGSGYAGVGD-HGAGYGNGGDHGYGV 120
YGAYGGGSGGGY G GAGSALGGSGYGSGGGGGGGSGYAGVGD G+GYG+GG G GV
Sbjct: 61 YGAYGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGV 120
Query: 121 ---DLG--GSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGG 180
DLG G GYGSGGGGGSGVGYGDL GHGKGYGSGGGGGSGYGG +DHGVGYGSGGGG
Sbjct: 121 GYGDLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGG 180
Query: 181 GYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGY 240
GYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGG KGYGGG GYGGGA GSGY
Sbjct: 181 GYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGRDKGYGGGP-----KGYGGGAKGSGY 240
Query: 241 GSGGGGGSGYG--GGEEGGYDGGY 255
GSGGG GSGYG GGEEGGYDGGY
Sbjct: 241 GSGGGAGSGYGGVGGEEGGYDGGY 256
BLAST of Lag0017301 vs. NCBI nr
Match:
XP_022924241.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita moschata])
HSP 1 Score: 261.9 bits (668), Expect = 5.7e-66
Identity = 212/284 (74.65%), Postives = 222/284 (78.17%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGP 60
MAI+K+ S FLLL+GLGLASA RTLLSYDPPHHSDVGYGY+ HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ---HNPRVGYDHDHHDGP 60
Query: 61 YGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGD------------------ 120
YGAYGGGSGGGYG GAGS+LGGSGYGS GGGGGSGYAGVGD
Sbjct: 61 YGAYGGGSGGGYGAGAGSSLGGSGYGS--GGGGGSGYAGVGDVGGSGYGSGGGGGSGVGY 120
Query: 121 -----HGAGYGNGGDHGYGV---DLG--GSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGG 180
HG GYG+GG G GV DLG G GYGSGGGGGSGVGYGDLGGHGKGYGSGGGG
Sbjct: 121 GDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGG 180
Query: 181 GSGYGGKSDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYG 240
GSGYGG +DHGVGYGSGGGGGYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGGGAK
Sbjct: 181 GSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGGAK--- 240
Query: 241 GGSGGGGGAGYGGGAHGSGYGSGGGGGSGYG--GGEEGGYDGGY 255
GYGGGA GSGYGSGGG GSGYG GGEEGGYDGGY
Sbjct: 241 ---------GYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267
BLAST of Lag0017301 vs. NCBI nr
Match:
XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 261.5 bits (667), Expect = 7.4e-66
Identity = 215/263 (81.75%), Postives = 224/263 (85.17%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYD-PPHHSDVGY-GYERPVHNPKVGYERDHHD 60
M I + SFG LLLVGLGLASATRTLLSYD PPH S GY Y+ PVHNPKVGYERDHHD
Sbjct: 1 MDIFRNLSFGLLLLVGLGLASATRTLLSYDIPPHRS--GYDNYDHPVHNPKVGYERDHHD 60
Query: 61 GPYGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAGYGNGGDHGYGV- 120
GP YGGG+ GGYGGGAGS+LGGSGYGS GGGGGSGY GVGDHG GYG+GG GYG
Sbjct: 61 GP---YGGGAAGGYGGGAGSSLGGSGYGS--GGGGGSGYTGVGDHGVGYGSGGGGGYGAG 120
Query: 121 ---DLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGGGY 180
DLGGSGYGSGGGGGSG GYGDLGGHGKGYGSGGGGGSGY G+ DHGVGYGSGGGGGY
Sbjct: 121 VGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGY 180
Query: 181 GSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGYGS 240
GSGGG +GPG HG+GYGSGGGGGSG GY GG+KGY GGSGGGGGAGYGGGAHGSGYGS
Sbjct: 181 GSGGGVEHGPGVGHGIGYGSGGGGGSGGGY-GGSKGYEGGSGGGGGAGYGGGAHGSGYGS 240
Query: 241 GGGGGSGYGG-GEEGGYDGGYAP 257
GGG GSGYGG GEEGGYDGGYAP
Sbjct: 241 GGGAGSGYGGSGEEGGYDGGYAP 255
BLAST of Lag0017301 vs. ExPASy Swiss-Prot
Match:
P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)
HSP 1 Score: 49.7 bits (117), Expect = 5.8e-05
Identity = 146/269 (54.28%), Postives = 159/269 (59.11%), Query Frame = 0
Query: 8 SFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGPYGAYGGG 67
S FL+L+ LG+ SA R LL+ D GYG H GY G G+YGGG
Sbjct: 9 SLVFLVLLALGVCSARRALLTL------DAGYGLG---HGTGGGY-----GGAAGSYGGG 68
Query: 68 SGGGYGGGAGSA----LGGSGYGSGGGGGGGSGYAGVGDHGAGYGNGGDH--GYGVDLGG 127
GGG GGG G A + G G GSGGG GGG GY GD GAGYG GG G GV GG
Sbjct: 69 GGGGSGGGGGYAGEHGVVGYGGGSGGGQGGGVGYG--GDQGAGYGGGGGSGGGGGVAYGG 128
Query: 128 ----SGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGG--GGGYG 187
GYG G GGG+G GYG G HG GYG GGG G+G GG GY +GG GGGYG
Sbjct: 129 GGERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGG------GYNAGGAQGGGYG 188
Query: 188 SGGGA--GYGPGGDHGVGY--GSGGGGGSGSGYGGGAK---GYGGGSGGGGGAGYG-GGA 247
+GGGA G G GGDHG GY G G GGG+G GYGGG + G GGG GGG G GYG GG
Sbjct: 189 TGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGAGGE 248
Query: 248 H--GSGYGSGGGGGSGYG-GGEEGGYDGG 254
H G+G G GGG G GYG GGE GG GG
Sbjct: 249 HGGGAGGGQGGGAGGGYGAGGEHGGGAGG 255
BLAST of Lag0017301 vs. ExPASy TrEMBL
Match:
A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 2.9e-68
Identity = 216/264 (81.82%), Postives = 226/264 (85.61%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGP 60
MAI+K+ S FLLL+GLGLASA RTLLSYDPPHHSDVGYGY+ HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ---HNPRVGYDHDHHDGP 60
Query: 61 YGAYGGGSGGGY--GGGAGSALGGSGYGSGGGGGGGSGYAGVGD-HGAGYGNGGDHGYGV 120
YGAYGGGSGGGY G GAGSALGGSGYGSGGGGGGGSGYAGVGD G+GYG+GG G GV
Sbjct: 61 YGAYGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGV 120
Query: 121 ---DLG--GSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSGGGG 180
DLG G GYGSGGGGGSGVGYGDL GHGKGYGSGGGGGSGYGG +DHGVGYGSGGGG
Sbjct: 121 GYGDLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGG 180
Query: 181 GYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGGGAHGSGY 240
GYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGG KGYGGG GYGGGA GSGY
Sbjct: 181 GYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGRDKGYGGGP-----KGYGGGAKGSGY 240
Query: 241 GSGGGGGSGYG--GGEEGGYDGGY 255
GSGGG GSGYG GGEEGGYDGGY
Sbjct: 241 GSGGGAGSGYGGVGGEEGGYDGGY 256
BLAST of Lag0017301 vs. ExPASy TrEMBL
Match:
A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 2.7e-66
Identity = 212/284 (74.65%), Postives = 222/284 (78.17%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDGP 60
MAI+K+ S FLLL+GLGLASA RTLLSYDPPHHSDVGYGY+ HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQ---HNPRVGYDHDHHDGP 60
Query: 61 YGAYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYAGVGD------------------ 120
YGAYGGGSGGGYG GAGS+LGGSGYGS GGGGGSGYAGVGD
Sbjct: 61 YGAYGGGSGGGYGAGAGSSLGGSGYGS--GGGGGSGYAGVGDVGGSGYGSGGGGGSGVGY 120
Query: 121 -----HGAGYGNGGDHGYGV---DLG--GSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGG 180
HG GYG+GG G GV DLG G GYGSGGGGGSGVGYGDLGGHGKGYGSGGGG
Sbjct: 121 GDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGG 180
Query: 181 GSGYGGKSDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYG 240
GSGYGG +DHGVGYGSGGGGGYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGGGAK
Sbjct: 181 GSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGGAK--- 240
Query: 241 GGSGGGGGAGYGGGAHGSGYGSGGGGGSGYG--GGEEGGYDGGY 255
GYGGGA GSGYGSGGG GSGYG GGEEGGYDGGY
Sbjct: 241 ---------GYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267
BLAST of Lag0017301 vs. ExPASy TrEMBL
Match:
A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)
HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 206/271 (76.01%), Postives = 217/271 (80.07%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYD-PPHHSDVGYGYE-RPVHNPKVGYERDHHD 60
MAI+K SFGFLLLV LGLASA R+LL YD PPH S Y+ PV NPKVGYE DHHD
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
Query: 61 GPY-------GAYGGGSGGGY--GGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAGYGN 120
G Y YGGG+GGGY GGGAGS+LGGSGYGS GGGGGSGY GVG+HG GYG+
Sbjct: 61 GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGS--GGGGGSGYGGVGNHGVGYGS 120
Query: 121 GGDHGYGV----DLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVG 180
GG GYG DLGGSGYGSGGGGGSG GYGDLGGHGKGYGSGGGGGSGYGG+ DHGVG
Sbjct: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVG 180
Query: 181 YGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAGYGG 240
YGSGGGGGYGSG G G G DHGVGYGSGGGGG+G GY GG+KGYG GSGGGGGAGYGG
Sbjct: 181 YGSGGGGGYGSGVG---GAGVDHGVGYGSGGGGGAGGGY-GGSKGYGAGSGGGGGAGYGG 240
Query: 241 GAHGSGYGSGGGGGSGYGGGEEGGYDGGYAP 257
GAHGSGYGSGGG G+ G GEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGGAGA--GSGEEGGYDGGYAP 263
BLAST of Lag0017301 vs. ExPASy TrEMBL
Match:
A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56
Identity = 208/274 (75.91%), Postives = 218/274 (79.56%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYD-PPHHSDVGY-GYERPVHNPKVGYE----- 60
MAI+K SFGFLLLV LGLASA R+LLSYD PPH S GY Y+ PV NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRS--GYDNYDHPVVNPKVGYEHDRRD 60
Query: 61 -----RDHHDGPYGAYGGGSGGGY--GGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAG 120
RDHHD P YGGG+GGGY G GAGS+LGGSGYGS GGGGGSGY GVG+H G
Sbjct: 61 GYYHDRDHHDAP---YGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVG 120
Query: 121 YGNGGDHGYGV----DLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDH 180
YG+GG GYG DLGGSGYGSGGGGGSG GYGDLGG GKGYGSGGGGGSGYGG+ DH
Sbjct: 121 YGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDH 180
Query: 181 GVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAG 240
GVGYGSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGY GG+KGYGGGSGGGGGAG
Sbjct: 181 GVGYGSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGY-GGSKGYGGGSGGGGGAG 240
Query: 241 YGGGAHGSGYGSGGGGGSGYGGGEEGGYDGGYAP 257
YGGGAHGSGYGSGGG GS GEEGGYDGGYAP
Sbjct: 241 YGGGAHGSGYGSGGGAGS----GEEGGYDGGYAP 261
BLAST of Lag0017301 vs. ExPASy TrEMBL
Match:
Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 7.5e-56
Identity = 207/274 (75.55%), Postives = 218/274 (79.56%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASATRTLLSYD-PPHHSDVGY-GYERPVHNPKVGYE----- 60
MAI+K SFGFLLLV LGLASA R+LLSYD PPH S GY Y+ PV NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRS--GYDNYDHPVVNPKVGYEHDRRD 60
Query: 61 -----RDHHDGPYGAYGGGSGGGY--GGGAGSALGGSGYGSGGGGGGGSGYAGVGDHGAG 120
RDHHD P YGGG+GGGY G GAGS+LGGSGYGS GGGGGSGY GVG+H G
Sbjct: 61 GYYHDRDHHDAP---YGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVG 120
Query: 121 YGNGGDHGYGV----DLGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDH 180
YG+GG GYG DLGGSGYGSGGGGG+G GYGDLGG GKGYGSGGGGGSGYGG+ DH
Sbjct: 121 YGSGGGGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDH 180
Query: 181 GVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGGAKGYGGGSGGGGGAG 240
GVGYGSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGY GG+KGYGGGSGGGGGAG
Sbjct: 181 GVGYGSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGY-GGSKGYGGGSGGGGGAG 240
Query: 241 YGGGAHGSGYGSGGGGGSGYGGGEEGGYDGGYAP 257
YGGGAHGSGYGSGGG GS GEEGGYDGGYAP
Sbjct: 241 YGGGAHGSGYGSGGGAGS----GEEGGYDGGYAP 261
BLAST of Lag0017301 vs. TAIR 10
Match:
AT5G46730.1 (glycine-rich protein )
HSP 1 Score: 42.4 bits (98), Expect = 6.6e-04
Identity = 134/268 (50.00%), Postives = 146/268 (54.48%), Query Frame = 0
Query: 1 MAITKAFSFGFLLLVGLGLASAT-RTLLSYDPPHHSDVGYGYERPVHNPKVGYERDHHDG 60
M KAFS F L++G+ + AT R LL+Y + G G+ G
Sbjct: 1 MVSLKAFSTVFFLILGVSICYATSRNLLNYG---QASGGGGH---------GGGGGSGGV 60
Query: 61 PYGAYGGGSGGGYGGGAGSALGG-----SGYGSGGG---GGGGSGYAGVGDHGAGYGNGG 120
G YGG SGGGYGGG+G GG GY SGGG GGGG G A G + +G G GG
Sbjct: 61 SSGGYGGESGGGYGGGSGEGAGGGYGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGG 120
Query: 121 DHGYGVDLGG--SGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGKSDHGVGYGSG 180
GYG GG G G G GGG G YG G H GYG+G G G G G G Y G
Sbjct: 121 GGGYGGAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAY--G 180
Query: 181 GGGGYGSGGGAGYGPGGDHGVGYGSG-GGGGSGSGYGGGAKGYGGGSG---GGGGAGYGG 240
GGGG+G GGG G G G GYG G GGG G G GGA GYGGG G GGGGA GG
Sbjct: 181 GGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGG 240
Query: 241 GAHGSGYGSGGGGGSGYGGGEEGGYDGG 254
GAHG GYGSGGG G GYGGG GGY GG
Sbjct: 241 GAHGGGYGSGGGEGGGYGGGAAGGYGGG 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038905926.1 | 4.2e-69 | 83.65 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_023539508.1 | 3.6e-68 | 81.23 | glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] ... | [more] |
XP_023005512.1 | 6.1e-68 | 81.82 | glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima] | [more] |
XP_022924241.1 | 5.7e-66 | 74.65 | glycine-rich cell wall structural protein 1.8-like [Cucurbita moschata] | [more] |
XP_038903617.1 | 7.4e-66 | 81.75 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
P10496 | 5.8e-05 | 54.28 | Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KTC0 | 2.9e-68 | 81.82 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... | [more] |
A0A6J1E911 | 2.7e-66 | 74.65 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662... | [more] |
A0A1S3BJM7 | 1.8e-57 | 76.01 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A0A0L1U7 | 3.4e-56 | 75.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1 | [more] |
Q9ZWM2 | 7.5e-56 | 75.55 | Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G46730.1 | 6.6e-04 | 50.00 | glycine-rich protein | [more] |