Lag0017273 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017273
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CS domain-containing protein
Location	chr5: 1604257 .. 1608322 (-)
RNA-Seq Expression	Lag0017273
Synteny	Lag0017273

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAACGAGCTTTACCAGTGCTCTCTCTCTGTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTCTCACCTATCGCCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGGTACTTCTTCTTCTGCAACTGTTTCTGTTTTGTTTGTGGAAAAGTTAGGACTGTAAATTGTGTGAGGCCTCTTTTCTTCGTTGAATTTCTTTGTCGCCTGTTGTCTGTACTAGCTACGTTCAAAATTTTTGGAAGTATTTTATCGGATGATGTTTCGCATTGCCTTCCTAAAGCGAGGAAGATTAGATCTGAACTGACTATTGTTAGAATTTATAAATCGAAGAGAAGTTTTCTTCTCTTTTCCTTTCGTTATCTTTATAACTGACGCTTCGTTTGACGTACATTGAGGAACTAGAGGTTAGAGAGCCGAAGTTTTGTATGCAGATGCATCGTTGAGGCTGTAGTGAAATTTGAGCGTTGTATGATGTGTTGTCTTTATGAGACATGTAAATAGTTTATTGGCAATGAATGATCCACTCGCATCAGTTTAATGCATATAATATTTGAAACGAACTGGTTTATGTATCCTCTAATTATAAAATCCCCTAGAATAGCATAAGAAATGGCAGGAATAATTATACTAAATATTATGGTAGCATGTGTTGTGGCCATTAGATGATGAGTTCTTACATCATATAAGCATTAGCTCTTTGCACTTCGTTCTTTAACCCAATAGGGATGATTCTCTTATTCACCGTGTATTTGAGTTGCCTTTTTATTCGTTCACCAATCTTTACCAATACTTACTAGATGAAATTTCATGCAGTTCACCGATGGTTCTTCTGATGTGGAATTGAGGTTACAACTTGGGACTCAAGAAATTTGTGGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACAATTAAAGTACAGCGCTTGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTTTGTCATTGTCACCGTAGATAGCCTCCTACAATCAGTATGAATTGTCTAAATATGACATTTCTTATGTTGAACAGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATAGTTCTTTATCTGTCTTGGGTCATTTTCATTTTCCAATGTTCAAAGTTGATAATGGTTATCACACCAATTGCCGGTTTATTTGAAATAACTGATTATATGCTTTTCCAGGTAGTGTATATCAACTGAATTGTGACCTTGTAATGTATATAGCTTACATCTTAAACAAGGCAAATATTTTATCGCAAGATAGGACCTACTTCATCAGTTATCTTAAGCAAGACAAACATTAACTTCCTTTATTCAATTATGCCCTTTCTAGAATTGTTCCTAGAACTTCCATTTGATAAATTTTTACTCGAATGATCTCAGGTATACTCCACTAAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGTAAGTACTTTTGACCCTGAACATGCTTTAATGTCACTAATCACTGTCAGGATCCTCTAACTTTTTTTCCATTACACAATAATCACCTTCGCATTAATTTGGTCTATATCGATTTTGAGGTCAGAAGTGTTATGTACCAGTTACTTTGTTTCTTTGTTTCTTTTTTATTTTTAAAATGTCGAATGGAAGGTCCTCACAAGAAAAGAGGCTACTGAGCCAAAAGGGAACTGCAGAAGCTTATACAAAAGATCCCCAACTTTTGGTAACAAGAAATAAAATGTAATCACAAAATAAATATGAATTAAGAGTCCAAAAGAAGAGAGGACTCAAAATCTTGAATTGTGCCACCCCTCATTCAACTTCTTCCTTTTCTCCTTCATGAAGCGAGGACTCGAAACTTCTTCCTGCATCATCTCCGTTGAACAAACCAAAACTCTACCAAGAAATCCAACTTTATAGACGTGGAAGGGACCATGAACTATGATTCAAATCCTCTGCCATTCTCCTAGTCCTACAAAAAACACACCAACTAAGAACCAATGACAAAAGAGGAGCTATGGTATTGATTCTTAGGTCTAAGAGCCCAGCAAAGAGGTGCATACTCTTTTGAATTTTCAATTTCCACAAAGTAAAGAAGAATTGCATGTTTGAAGAAGTCAGGAAAAACACCAACCAACTGGTTAAGAGGTAAAAAAGGAGGCTAGCTCCTCGATCTCACGACTGTTGGGTGCCCTTTTAGTGAATCATAGATGAGACTAAGCGATTTTTGGAGATGACTATTGTCGAACCACTCTGAGTTGGCTTGGTCAATAAGGATCATGTAAATAATGAATGACTTAGAAGGAATGAGTTCAAGTCATGATGGTCACTTATTTAGGATTTAATATCTTACTGGTTATCATAGAAACCAAATGTAGGTTGAGTTTGACATTGATTTGAAGCTATAAAAAGTGATTGTAAAAGAACTTTAATTGTTTTTAGTATTTGGTAAAACTGATCCTAAATTAATTAAGTACCTTTTCAATTATGTTCATTTATAAAATTCAATTAATAGTTGCTTTTCAAATTAGCTTTCCTACAAATATGGTGGATTTGCTAACTAACTATTTATCCTCTCATACCTCTACATTGTTGAGACGTAATTCACTTAGTTTATATTTTAAATTTAATTTGTAGCTTCTATTATCTTACTTTAATTCAATTGAATATATTTTTCTTACTTTTTTTTTATTATTTAAATTGAAATAACATCTTTTTCATTTTTTTAAGCTATTTTTTCTCAGCAAAATATAAAAATTTATAGATTAAACACAATATTGTGATTTAACTCATATATATTTGAAATTAATTATCTTATAAAAACTTTGGAATTAAATATCAACATACCAATATGCATTATTGAAATATTAGGCCCATTTTGGTAATTTTATTTACGCTTCAACAATTTAATATTAGTTTACCAAATGTTTTAACCTACTTTCCAAACACTAAAAAAAAAAAATTGCAATTGGGAGGGGAGGGACTAGTATGGATCCAATAATCCTCTCAAAATAAAACTCTACGGCCAGTCCCTATGTAGGAAGGTAATGAAAGCAAGGAAAATCTATTTGTCAGTTGTTGTGATGTGAGTCATACTTGCTCATAATTGCCTAATTCATCAAAGTCTGAGAATAAAGTTTCAATAAACCCATCACTGATGCTCTCTCCTCTCTCTACCCCTCCTCCCCAACCCATCGCCGACCAGCATCCCCCGCCCCAATGCCAGACCACCTGCTAAAACCCTCCCTTTCGAACCGTAGGGATGACTATACGACCCTCTCCTGCCTCGACAACCTTCTCTATCGAACGGAAATCTTATGCTATTGATAGACGAAATGGCATACGTATTTCTGAATCATCAAAGGACTGCACCTTCACCATCTCCCTTAAGAATGAATCTCTCGCCTGGTTAATCTCCTGTTTCACTGACCTCTTGAACGCCCCTCTCACACAAAAGTTCTTCAAGGAATGTCGCACTGAAGAATATGTTTTATGGATAGAAAAGATTACAAACAGAAAGGGCCATTGTGCCGAAATTGCCAGACTGGGGGTAAATGGCGGGCTGAATAAAATTATTGTCCCTGTTGGAGCTGATAAATATGGATGGAAAAACTTCTTCTCTCTTCTTAAAGACCCCACCAAACCAACTCCACCTGCCATTAATGCAAAACAGCCTCACCAGAGCCTTATTAAAGACCACCTTAAAGAGAAAGAGATAGAAATGAGAAAGAAAATTCACATAAACTAA

mRNA sequence

ATGGCTTCAACGAGCTTTACCAGTGCTCTCTCTCTGTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTCTCACCTATCGCCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGTTCACCGATGGTTCTTCTGATGTGGAATTGAGGTTACAACTTGGGACTCAAGAAATTTGTGGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACAATTAAAGTACAGCGCTTGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATACTCCACTAAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGGATGACTATACGACCCTCTCCTGCCTCGACAACCTTCTCTATCGAACGGAAATCTTATGCTATTGATAGACGAAATGGCATACGTATTTCTGAATCATCAAAGGACTGCACCTTCACCATCTCCCTTAAGAATGAATCTCTCGCCTGGTTAATCTCCTGTTTCACTGACCTCTTGAACGCCCCTCTCACACAAAAGTTCTTCAAGGAATGTCGCACTGAAGAATATGTTTTATGGATAGAAAAGATTACAAACAGAAAGGGCCATTGTGCCGAAATTGCCAGACTGGGGGTAAATGGCGGGCTGAATAAAATTATTGTCCCTGTTGGAGCTGATAAATATGGATGGAAAAACTTCTTCTCTCTTCTTAAAGACCCCACCAAACCAACTCCACCTGCCATTAATGCAAAACAGCCTCACCAGAGCCTTATTAAAGACCACCTTAAAGAGAAAGAGATAGAAATGAGAAAGAAAATTCACATAAACTAA

Coding sequence (CDS)

ATGGCTTCAACGAGCTTTACCAGTGCTCTCTCTCTGTTTTCGCAAAACCCTATCAGAAACCTCGAGTTCTCTTCTCCGATTCTCTCACCTATCGCCAATGGCGTCGAATTCGCTTCCAATTCCATCGCTCTCACTTCCAGCGCCGGCCTCTCTCCTGCAACTTCTCGTTTCGGTTCCCGTTTCACTCGCAGCTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGTTCACCGATGGTTCTTCTGATGTGGAATTGAGGTTACAACTTGGGACTCAAGAAATTTGTGGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACAATTAAAGTACAGCGCTTGGGATCTACCATCACTCTTCTGGAAACAAAGCAACTATTTGAGAAAATAAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGTTTAAAGAAGCATGATCCAGACTTGAAATGGCCTGACATTGTGGAGTCTTGGGAATCCCTAACAGCAGGATCTACACAGCTTCTAAAAGGAACATCAATATATTTGATAGGGGATTCGACAGATATTAACCAAAGAGTTGCTCATGAACTAGCAGTTGGACTTGGGTATACTCCACTAAGTACAAAAGAACTGCTGGAAACATTTTCCAAGCAGACCATTGATTCATGGATGACTATACGACCCTCTCCTGCCTCGACAACCTTCTCTATCGAACGGAAATCTTATGCTATTGATAGACGAAATGGCATACGTATTTCTGAATCATCAAAGGACTGCACCTTCACCATCTCCCTTAAGAATGAATCTCTCGCCTGGTTAATCTCCTGTTTCACTGACCTCTTGAACGCCCCTCTCACACAAAAGTTCTTCAAGGAATGTCGCACTGAAGAATATGTTTTATGGATAGAAAAGATTACAAACAGAAAGGGCCATTGTGCCGAAATTGCCAGACTGGGGGTAAATGGCGGGCTGAATAAAATTATTGTCCCTGTTGGAGCTGATAAATATGGATGGAAAAACTTCTTCTCTCTTCTTAAAGACCCCACCAAACCAACTCCACCTGCCATTAATGCAAAACAGCCTCACCAGAGCCTTATTAAAGACCACCTTAAAGAGAAAGAGATAGAAATGAGAAAGAAAATTCACATAAACTAA

Protein sequence

MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSRFTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLGSTITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPASTTFSIERKSYAIDRRNGIRISESSKDCTFTISLKNESLAWLISCFTDLLNAPLTQKFFKECRTEEYVLWIEKITNRKGHCAEIARLGVNGGLNKIIVPVGADKYGWKNFFSLLKDPTKPTPPAINAKQPHQSLIKDHLKEKEIEMRKKIHIN

Homology

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BLAST of Lag0017273 vs. NCBI nr
Match: XP_022145268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-107
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFT+AL  FSQNPI+NLEFSSPIL  I NGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           F R+CSSST PVRTLDYEFTDGSS+VELRLQLGTQEI  SKD+FVDANETSLTI+VQR G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

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BLAST of Lag0017273 vs. NCBI nr
Match: XP_022145269.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-107
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFT+AL  FSQNPI+NLEFSSPIL  I NGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           F R+CSSST PVRTLDYEFTDGSS+VELRLQLGTQEI  SKD+FVDANETSLTI+VQR G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

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BLAST of Lag0017273 vs. NCBI nr
Match: XP_023553268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553269.1 probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.5 bits (994), Expect = 1.4e-103
Identity = 205/237 (86.50%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEF-SSPILSPIANGVEFASNSIALTSSAGLSPATSRFGS 60
           MAS SFTSAL  FSQNPIRNLE  SSPI    +NGVEFASNSI LTS  GLSPATSRF S
Sbjct: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRFSS 60

Query: 61  RFTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRL 120
           RFTR+CSSSTAPVRTLDYEFTDGSS+VELRLQL TQ+I  SKD FVDANETSLTI+V+RL
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDAFVDANETSLTIRVRRL 120

Query: 121 GSTITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180
           GS +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           LKGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWM    S A
Sbjct: 181 LKGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDA 237

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BLAST of Lag0017273 vs. NCBI nr
Match: XP_022965359.1 (probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 6.7e-103
Identity = 202/236 (85.59%), Postives = 211/236 (89.41%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAS SFTSAL  FSQN IRNLE SSPI    +NGVEFASNSI LTS  GL PATSR  SR
Sbjct: 1   MASASFTSALCFFSQNTIRNLEVSSPIFYSSSNGVEFASNSIGLTSCTGLPPATSRLSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           FTR+CSSSTAPVRTLDYEFTDGSS+VELRLQL TQ+I  SKDVFVDANETSLTI+V+RLG
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGD+TDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWM    S A
Sbjct: 181 KGTSIYLIGDATDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDA 236

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BLAST of Lag0017273 vs. NCBI nr
Match: XP_008448646.1 (PREDICTED: probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 8.8e-103
Identity = 201/236 (85.17%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFTSAL  FSQNPIRNL+FSSPI S  ++GV F+S S ALTS + LSP+ SRF SR
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQFSSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           FTR+CSSSTAPVRTLDYEFTD SS+VELRLQLGTQ+I  SKDV+VDANETSLTI+VQRLG
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSI+LIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

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BLAST of Lag0017273 vs. ExPASy Swiss-Prot
Match: O82290 (Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL2 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 3.6e-59
Identity = 126/221 (57.01%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 23  FSSPILSPIANGVEFASNSIALTSS---AGLSPATSRFGSRFTR----------SCSS-S 82
           F+SP L+P+     F S++   +S    +G      R   RF++          SC+  S
Sbjct: 12  FNSPSLNPVTTQATFLSSNRIRSSPRVFSGFHSLRRRGFRRFSQNVIPDRFNSFSCNCLS 71

Query: 83  TAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLGSTITLLET 142
                T+DYEFTDG  +VELRL+L T EI   KD+ VDA+ TSL +K +R G  ITLLET
Sbjct: 72  AVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRNGLLITLLET 131

Query: 143 KQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLI 202
             LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QLLKG SIY++
Sbjct: 132 NHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQLLKGASIYIV 191

Query: 203 GDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWM 230
           GDST+INQ+V+ ELAVGLGY+PL +KELLE+FSKQTIDSW+
Sbjct: 192 GDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWI 232

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BLAST of Lag0017273 vs. ExPASy TrEMBL
Match: A0A6J1CUQ8 (probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014761 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 5.8e-108
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFT+AL  FSQNPI+NLEFSSPIL  I NGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           F R+CSSST PVRTLDYEFTDGSS+VELRLQLGTQEI  SKD+FVDANETSLTI+VQR G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

[Close]

BLAST of Lag0017273 vs. ExPASy TrEMBL
Match: A0A6J1CVH5 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014761 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 5.8e-108
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFT+AL  FSQNPI+NLEFSSPIL  I NGVEFASNSIALTSSAGLSPATSRF SR
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEFSSPILFSITNGVEFASNSIALTSSAGLSPATSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           F R+CSSST PVRTLDYEFTDGSS+VELRLQLGTQEI  SKD+FVDANETSLTI+VQR G
Sbjct: 61  FARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRTG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIYLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

[Close]

BLAST of Lag0017273 vs. ExPASy TrEMBL
Match: A0A6J1HQS7 (probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465239 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 3.3e-103
Identity = 202/236 (85.59%), Postives = 211/236 (89.41%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MAS SFTSAL  FSQN IRNLE SSPI    +NGVEFASNSI LTS  GL PATSR  SR
Sbjct: 1   MASASFTSALCFFSQNTIRNLEVSSPIFYSSSNGVEFASNSIGLTSCTGLPPATSRLSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           FTR+CSSSTAPVRTLDYEFTDGSS+VELRLQL TQ+I  SKDVFVDANETSLTI+V+RLG
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S +TLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSIYLIGD+TDINQ+VAHELAVGLGYTPLSTKELLETFSKQ IDSWM    S A
Sbjct: 181 KGTSIYLIGDATDINQKVAHELAVGLGYTPLSTKELLETFSKQNIDSWMLAEGSDA 236

[Close]

BLAST of Lag0017273 vs. ExPASy TrEMBL
Match: A0A1S3BJK2 (probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490754 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.3e-103
Identity = 201/236 (85.17%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFTSAL  FSQNPIRNL+FSSPI S  ++GV F+S S ALTS + LSP+ SRF SR
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQFSSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           FTR+CSSSTAPVRTLDYEFTD SS+VELRLQLGTQ+I  SKDV+VDANETSLTI+VQRLG
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSI+LIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

[Close]

BLAST of Lag0017273 vs. ExPASy TrEMBL
Match: A0A1S3BL22 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490754 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 4.3e-103
Identity = 201/236 (85.17%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MASTSFTSALSLFSQNPIRNLEFSSPILSPIANGVEFASNSIALTSSAGLSPATSRFGSR 60
           MASTSFTSAL  FSQNPIRNL+FSSPI S  ++GV F+S S ALTS + LSP+ SRF SR
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQFSSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSSR 60

Query: 61  FTRSCSSSTAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLG 120
           FTR+CSSSTAPVRTLDYEFTD SS+VELRLQLGTQ+I  SKDV+VDANETSLTI+VQRLG
Sbjct: 61  FTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRLG 120

Query: 121 STITLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLL 180
           S ITLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGSTQLL
Sbjct: 121 SIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQLL 180

Query: 181 KGTSIYLIGDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWMTIRPSPA 237
           KGTSI+LIGDSTDINQ+VAHELAVGLGYTPLSTKELLETFSKQTIDSWM    S A
Sbjct: 181 KGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLETFSKQTIDSWMLAEGSNA 236

[Close]

BLAST of Lag0017273 vs. TAIR 10
Match: AT2G35500.1 (shikimate kinase like 2 )

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-60
Identity = 126/221 (57.01%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 23  FSSPILSPIANGVEFASNSIALTSS---AGLSPATSRFGSRFTR----------SCSS-S 82
           F+SP L+P+     F S++   +S    +G      R   RF++          SC+  S
Sbjct: 12  FNSPSLNPVTTQATFLSSNRIRSSPRVFSGFHSLRRRGFRRFSQNVIPDRFNSFSCNCLS 71

Query: 83  TAPVRTLDYEFTDGSSDVELRLQLGTQEICGSKDVFVDANETSLTIKVQRLGSTITLLET 142
                T+DYEFTDG  +VELRL+L T EI   KD+ VDA+ TSL +K +R G  ITLLET
Sbjct: 72  AVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRNGLLITLLET 131

Query: 143 KQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQLLKGTSIYLI 202
             LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QLLKG SIY++
Sbjct: 132 NHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQLLKGASIYIV 191

Query: 203 GDSTDINQRVAHELAVGLGYTPLSTKELLETFSKQTIDSWM 230
           GDST+INQ+V+ ELAVGLGY+PL +KELLE+FSKQTIDSW+
Sbjct: 192 GDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWI 232

The following BLAST results are available for this feature:

BLAST of Lag0017273 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145268.1	1.2e-107	88.56	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica c...	[more]
XP_022145269.1	1.2e-107	88.56	probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Momordica c...	[more]
XP_023553268.1	1.4e-103	86.50	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita p...	[more]
XP_022965359.1	6.7e-103	85.59	probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima]	[more]
XP_008448646.1	8.8e-103	85.17	PREDICTED: probable inactive shikimate kinase like 2, chloroplastic isoform X2 [...	[more]

BLAST of Lag0017273 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82290	3.6e-59	57.01	Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana...	[more]

BLAST of Lag0017273 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUQ8	5.8e-108	88.56	probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Momordica...	[more]
A0A6J1CVH5	5.8e-108	88.56	probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Momordica...	[more]
A0A6J1HQS7	3.3e-103	85.59	probable inactive shikimate kinase like 2, chloroplastic OS=Cucurbita maxima OX=...	[more]
A0A1S3BJK2	4.3e-103	85.17	probable inactive shikimate kinase like 2, chloroplastic isoform X2 OS=Cucumis m...	[more]
A0A1S3BL22	4.3e-103	85.17	probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis m...	[more]

BLAST of Lag0017273 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35500.1	2.6e-60	57.01	shikimate kinase like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 77..155 e-value: 3.5E-5 score: 24.7
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 72..166 score: 11.595613
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 72..181 e-value: 8.3E-14 score: 53.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 68..170
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 77..230
None	No IPR available	PANTHER	PTHR21087:SF23	INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED	coord: 77..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017273.1	Lag0017273.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity