Lag0017258 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAAATTGGGGGATTTCAAGTTACCACATTTCTTCAATTATCCACCATATTTCACGTAATTTTCCTACTCTGTCTTAGTTACCATTGTTTTACGTCATTATAAGCTACAACAAGTAACTTGGAAGTTGTCTTCGTCAATTTCTGTTGATAATGATATCTTGGTTAGAATGGCTGTTTTATGAGTGAATGAATGAAACTTTCGCTTTACTTTTCCCATAAGCCTCATAAATATGAACGTAATAATTCTATCTTGCTGCAATACCTGCAATTGTTATTGATAGCTTTGGTTGTTTCACTTTTTGCAAGCTTTTCTTTTGTCTTGAGTTGCATATATAACCTTTTATTGCATGTCTTCTCAGTTTGCAACCAGTGAGGGACACCCGTGAGAAGCAAATTCAGCTCTGGAAGGAACTAATTCTCGACTATTGCCGAACACAGAAGATATTTGTCATTGGACTCGAAGAGGAGTTTCCTCTATTTGCAAATTCTGTCATTGAGAGTAAATTCATGAACTTGTTTGGTCCTAATTGGTTGTTAAAACCTATTGATACATGCATAAATATCAACCTTAGAAAGGCCATTGACATTAACATCATGAACAGTGTGAAAAAGATTAAGGCCTATCATTTTTTGCAACCTTTTCACTCTACGAAGCATAGCATATCATTGGGATTGGTGTTTAGGACTCCAGTTTTTTTATGTATTTTACAGTGTGGTTGTGATGCTACAGGATCTCTTAGTCATGAAGCTAGAGAAGCTTTTCTCTCAGCCTTAGTTTCAGATGGTTAGGCCCTGCTAGTTTAGTTCTATAATTCTATTTGTTTACAGTTTCCATTCATTCCCGAGGGAAAAACTGATATTTGGTACTTTTATTGTCCAATAGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGCCTCATTTTATGGCACCGGATTCAAGATTGGGCCGACATCATTTTGCACTTTGTAAGACTAAATACTTGTTAACTTCATAGATATGTAAAAGTTGATTGGTTTTGGGTGGGTTTGGAAGGACTTTTGAAATGGTTAAAGTTGCTATTATCCCATTAAAAGCAATTTTCAAAATTCATATAATATTTATTTAGATAATCGAAGGTGCTTTGAAAAATTCTTATTCTAAAACTATTGCCTTGTTGAATAGGTGAAAAATAATGGACTTGAAGATAGTGTCATGACAGTCGAGGAAATACGTTCGGGAGTTGAATCTAGAGGAACAGGTACTTCCCTTGCTTCTTCTGAGTTGATTTAGATCTTCGAACGATTTCTAAATTCATTTTTTCATATGCTACATTTTTTAAGTACAACAAAGGTGTGGTAGGGAGATTTGAACCTCTAACCTCAAGGAAAGAAGTATATATCAATTACGGTCGAGTTATGCTCATATTGACTTTCATATGCTACATTGATATTGGTTTTAAAGCGACTCTAGTAGGTTAATTATTAATTAAATTAGGTGGACGTAAAAGCATCTTGGCGCTAAATAAATTCAGGAAATATGTAGATTGGTTTAAAGGAAAATGAAACTCTGGCATAAACTGTTTATATGAATGTATATCTTTTTAGTTTAAATCTCATTTCGACTTTTAAACTTCCATACTTGTTCTTATATGTCAACTAGAATATAGTTCAACTGGTTAAGATATATATTATCAATCAAGAGGTTAAAGGTTTAAATCCTCCCATCTCACATGTTGAACTCAAAAGAAAGCTTGTTCTTATATTTTTTTTAAATTTTCTACTTTGAATTCTTTGGTCCTTATCAAATCTGTAGATAATATTTCGCAAATTTGATGCTAAACCGAATGCATGAGACTTGAACATGAATTTAATTTATGTGATGTCATGTACGAATTTTGTGGAATGCTCTAAAAAGTTAGATGCTAAAGACAAATAATTTTCTACGCAAAATTCATAAACCGAATTGGAACATTTGTCCAAGGACTAAAACAAATCGATGTAAGCATTCTTGGACCACATTTTCTTCTTGAATGATGATATGTGCTTGCTGCTTGCGTTTGGTAGTGATTTTGGAATGACAAAAATCAATTTTTTCATATCTTTTTAGTTATTTTGGACATGACAAAAGTGTTTTTAGTCATTTCAAAGTACCTATATGTTTGTGTTTAAATACTAGGTTAAAATACCATTTGGTCCCTATACGTTGAGTGTTATTCCATATTAGTTCCTATACTTTCAAATGTCCAATTTTAGTCACTGTACTTTCAATAAAATTTAAAATTAGTTCCTACCATAAGTTTATTATTGTTTAACCGATTTTGAAATTTGACATTTGAGAGTATAGTGACTAAAATGAAACAAAACTCAAAGTACAGGGATCAAAATGATATTTAAACCTAAATACTACACTCTGCAATCACATCCAAACCCTATCTTCACGAACCAGTATATTTATTTTTCTTAAATGTCTGTTGTATGCATCAGAGCTTCAAGGGATTGATCGTACAATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGGAAGCTCGCAATTTTCAAGGGTTCTTCAACAGACGACGAAGGCATTAAATTCTCTGTATAA ATGCAGAAATTGGGGGATTTCAAGTTACCACATTTCTTCAATTATCCACCATATTTCACTTTGCAACCAGTGAGGGACACCCGTGAGAAGCAAATTCAGCTCTGGAAGGAACTAATTCTCGACTATTGCCGAACACAGAAGATATTTGTCATTGGACTCGAAGAGGAGTTTCCTCTATTTGCAAATTCTGTCATTGAGAGATCTCTTAGTCATGAAGCTAGAGAAGCTTTTCTCTCAGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGCCTCATTTTATGGCACCGGATTCAAGATTGGGCCGACATCATTTTGCACTTTGTGAAAAATAATGGACTTGAAGATAGTGTCATGACAGTCGAGGAAATACGTTCGGGAGTTGAATCTAGAGGAACAGAGCTTCAAGGGATTGATCGTACAATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGGAAGCTCGCAATTTTCAAGGGTTCTTCAACAGACGACGAAGGCATTAAATTCTCTGTATAA ATGCAGAAATTGGGGGATTTCAAGTTACCACATTTCTTCAATTATCCACCATATTTCACTTTGCAACCAGTGAGGGACACCCGTGAGAAGCAAATTCAGCTCTGGAAGGAACTAATTCTCGACTATTGCCGAACACAGAAGATATTTGTCATTGGACTCGAAGAGGAGTTTCCTCTATTTGCAAATTCTGTCATTGAGAGATCTCTTAGTCATGAAGCTAGAGAAGCTTTTCTCTCAGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGCCTCATTTTATGGCACCGGATTCAAGATTGGGCCGACATCATTTTGCACTTTGTGAAAAATAATGGACTTGAAGATAGTGTCATGACAGTCGAGGAAATACGTTCGGGAGTTGAATCTAGAGGAACAGAGCTTCAAGGGATTGATCGTACAATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGGAAGCTCGCAATTTTCAAGGGTTCTTCAACAGACGACGAAGGCATTAAATTCTCTGTATAA MQKLGDFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCRTQKIFVIGLEEEFPLFANSVIERSLSHEAREAFLSALVSDGRAEWLDKGHRKCLILWHRIQDWADIILHFVKNNGLEDSVMTVEEIRSGVESRGTELQGIDRTILMRALKQLEQKGKLAIFKGSSTDDEGIKFSV Homology
BLAST of Lag0017258 vs. NCBI nr
Match: XP_022949655.1 (vacuolar protein sorting-associated protein 25 [Cucurbita moschata] >XP_023005573.1 vacuolar protein sorting-associated protein 25 [Cucurbita maxima] >KAG6596709.1 Vacuolar protein sorting-associated protein 25, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95 Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Lag0017258 vs. NCBI nr
Match: XP_008448627.1 (PREDICTED: vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo] >KAA0053011.1 vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo var. makuwa] >TYK11467.1 vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95 Identity = 175/179 (97.77%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Lag0017258 vs. NCBI nr
Match: XP_023540532.1 (vacuolar protein sorting-associated protein 25 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95 Identity = 175/179 (97.77%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of Lag0017258 vs. NCBI nr
Match: XP_004146105.1 (vacuolar protein sorting-associated protein 25 [Cucumis sativus] >KGN55713.1 hypothetical protein Csa_009640 [Cucumis sativus]) HSP 1 Score: 357.1 bits (915), Expect = 9.1e-95 Identity = 173/179 (96.65%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Lag0017258 vs. NCBI nr
Match: XP_038891553.1 (vacuolar protein sorting-associated protein 25 [Benincasa hispida]) HSP 1 Score: 357.1 bits (915), Expect = 9.1e-95 Identity = 173/179 (96.65%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of Lag0017258 vs. ExPASy Swiss-Prot
Match: Q8VZC9 (Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana OX=3702 GN=VPS25 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 6.5e-88 Identity = 153/179 (85.47%), Postives = 168/179 (93.85%), Query Frame = 0
BLAST of Lag0017258 vs. ExPASy Swiss-Prot
Match: Q6AX45 (Vacuolar protein-sorting-associated protein 25 OS=Xenopus laevis OX=8355 GN=vps25 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 9.3e-34 Identity = 70/173 (40.46%), Postives = 105/173 (60.69%), Query Frame = 0
BLAST of Lag0017258 vs. ExPASy Swiss-Prot
Match: Q6NWF4 (Vacuolar protein-sorting-associated protein 25 OS=Danio rerio OX=7955 GN=vps25 PE=2 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 1.0e-32 Identity = 69/173 (39.88%), Postives = 106/173 (61.27%), Query Frame = 0
BLAST of Lag0017258 vs. ExPASy Swiss-Prot
Match: Q55GD9 (Vacuolar protein-sorting-associated protein 25 OS=Dictyostelium discoideum OX=44689 GN=vps25 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.8e-30 Identity = 68/188 (36.17%), Postives = 114/188 (60.64%), Query Frame = 0
BLAST of Lag0017258 vs. ExPASy Swiss-Prot
Match: Q9CQ80 (Vacuolar protein-sorting-associated protein 25 OS=Mus musculus OX=10090 GN=Vps25 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.6e-28 Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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