Lag0016139 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016139
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr12: 33776673 .. 33780931 (+)
RNA-Seq ExpressionLag0016139
SyntenyLag0016139
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTTTTCAACCTTCAACGCATCCTTCGTTTTTTGAGATTAACCTTCCAAATCTCTCAAATTGGTGACACAGCCCACTTTGAATTCTGTAGGTCCAATCTCTCCCTAAAAGTCTCCCACATTTCCCCTCACTTCATTGCAGAACTACGAATTCAATCTCTCTTCTTCGCCTATTACTTAACTGATGATTCACTGGATCATCATTGGACGATTTCGCTCAAGCAATTGTGCAATCATGTGAGAGACGGCATGTTTGCTTCTTCATTGGTCTTCTCTCTTACCAACGAAACCCCACCTCACGCACTCATTACATTTCAGACTTCATTGGAAGATTTCGCTCGAGCAGTTTTGCAATCATGTGAGAGACGGCACATGTTTTCTTCTTCATTGGTCTCCTTACATTTCAGAATTCTTGATCTTCTCTCTAACTTCTCATTCTACTAATTTTTCTTCTCTCCACAATGAATCTTGGTCCTAACTGCAATAAATTTTACGGTTTCAAGAACATAGTTTTATTCATTTGTTGTAAATCTTTGGAGGGTTCCTTCTTGAAAGTTCTTTTAATGCTAATAAACTCAAATTGATATTAAATACTTTAATATTGCTTCAAAATTCCATTTTGATCAGTACCCATTAATTTATGTAATAGCCACTTCTGAGCTGGAAGATTTGTATCATCGTAAGATGATGTTGTCACATCTAGAAGATCAGCATAATGTAGGCGACTTTAACTATCAAACTTTTTGCATAGTTCCTTCACAAGAGTTCAAGGACATTGTAATAGAGTTTAGAAATATTTCCCCAGGTGATACATAACTTGTCTCTTCTTTCCTCTCTTGTATTACTTGAAAGAAAATGGTTGAAAGTTTTTAAAAACTGGTTTTAACATTTGTTATATCATTTAATTTGTTACAGTTACTGTTACTTTGACGGATTCACAAGTGAAGTTTTCAAATACGGCATCCAACAAAGAGATTATTCTTACTGAAGCGGTATTCAAGAAACTAGATTCTTAATTCAAAACATTCATTTCATATATGCATGACAGAAAGGTCTATGAACCAATTCATTGCAGGAAAGACGATGTACGATTACTATTCAAGCTGGGGAAGAAGTTCAGTTCCTAATCACGTTCCATCCCGCGACGTTTTTTCATGATTTGACATCTTTTGCTGAAACGGTATGGTTGTGCAAGAGAATTAATACCCAAGGTGTAATCAGTGTCCCTGTTCAACCCAATGCAGAATTTCAAATTCATTTTCTTTGAATGCGACATGGGAATCAACCAATTCTACAATTTTGACATTGTTTTCTCTCTCAATAGCATTGAAAGGGTCGAAAATTGACCGCGAAAATACATGCATTTGATTCTAGTTTTCATTAGAATATTATGATTCACTTTCTTAGCAAACTATATAGAATTCTAACATTTGTATTCAAACTATATAGAGGATGATCCACAGTATCTACTTTGTAAACCATGTTATGATGTTAACCACAGGAACAATTATTTCCCAAGAGGTTGTTGCAAATTATATACTGTTGTACATTTTATTGTATTTAGGAATGCATTGAAAGTGTGTTTATTATGAAAACAATGTTGTACTTGAGAGTAGTTGTAAAAAGGTATTTTTGCAAAAGTATTTTGATTATAAGCAAACTAATAAAATATGGTTATAATAACAGATAATTTTGATGTTTAGTTCTATATATATACTTTAAATTAAAAGTATGGTTTCCTAGGATTGTTTGTTAATGGTAAAAATAATTAGTTAAGCACGATTAATTCTAGGGGTAGTAGCAAATTTAGCAAAATCAACCAAAATAATAGTAAAAATAACAAGCCCTAAAACTATTCGTAAATATGACAAAAATTGAATCCAATCCATGTAAAATGATTAAAACCCCATCTATCACTAATGGACTACAATTATGAGTGAAGCCAATCGGTGATAGAAGCCTATCACTGACATACTTAAGAAGCCTATCATTGACAAACTTCGATCATAATTGCAATTATTGTTGTCTAGGTGTTGTTGTATTTCTATCAATGATTAGCAGTCTATCACTCATAGACTCATGTGTCATTATGATCAAAGTCTATCAGTGACAATGTTTAGAAGTCCATCACTAACAGCAATAGTACATTGCAATTATGATTGGAGTCTATCAATAATAGTAGTTTATCACTAATAGACTTCAATCACAACACACATATGTAATCTATAAGTAATAGACTTGTACGAGAGGTAGACTACATGTCTTGTGTGATAGACTTCAATAAACAAAAATATATTTTTAAAATATTTTACTATTTTGATGTCTAGCTGATAAACTACATGTGTTGTGATTGAAGTCTAGCTATCAATAACAAACTTCAATATGTAACTGAATTAGCACCTTAATTGATGATAGATTTCAATATCTATTAACTCAACAACATTCTTCAATGTCTCACTTACACCCATCCCCTTGCATTCAACATCCTTCATTATATAACTACAATTAACTCTAATTAATGATAGACCTAAATAGCCATACAATTTGAAAGTACTAGCAAAAAAGAGAGAGGGAGAGAAAAAAAATCACTCAATATATTAGTATATCTGTGATAGGTTTCAAATATCAGTCCATCATCAGAGAGGAATATAACTCACATCTTCCCATATGGTGCAGTAGAGATCAGGAGCCCTGATTCTGACAAGACTTTTAAAGTGAATGGGCATCGACTCAAGATCTTGCACGAGGGTGAGTGTATTGCAGAGCTTGGGATTGTCGAGCTAGTTCTTTCGGACTATGAGGTTCATTAAGAAATTAGGAGAATCTCATTCGAGCAATCGAGGTTAAAATTTTGCTCTTCTCAAAGGCAGCTGAGCGATGAAAATTTACTTGCTTTCATTTACTTGCTTTCATTACTCTACCATTTTTCAAGAAAGAGTCATATTGTTTTACAATTTGAACAAGGCGATGGAGTTGAACACTGATACGATCATAAGGAACGAGATGGTGACCTGTGGGAAAAAGAATGAAGGGAAGTTGTTCTCCCCTGCACTGATCACAAAATTATGCAGGAAGGTCTGTTGAGAACATTTTCTACTCAATTGAATTTCTTTACACTTTTCACATGAAGGCTCAAGATCAAGATTTCTAGCAAGTTTACAGAGATGTTTTCCTTAGTTGTTTTGTTCAAAAGCGTTTGATGATGATACTTTGATCTCTCGACTTTTCAAATGTTTTTTTACATTACTTGAAGTTTTCAAAACCATAGAACTTGAGCAATTCCTTTTTTTTTTTCATAACACGTTCAAATTCAAACTCGCCTTATGTTTAGTCCTCCTTGTTGAAAAATAAACTTGATTTTGATAATTAGAATTTGGGCCCTAACCCAAATAAAAGGCCAAGTTCTAGAAATGTCTTAAGTAGATGAAAAATCTAGAGAAATCCACTAAGAAGATTTTTGGAGTATATGAGTAGAATTCTCTAGAATATTATAGAAAATTGTGTATTCTAGAGGATAATTTGTAGCCACAAGATTATAGTTGTGTGTTGGCAAAATCTTAACCACAAATTGAGGAGGTGGAAACTAGTATAAATATGAGTTGTGTCTTAAAGTTTTGTATCAAGCCAAAAAGCTAGAATTGAGTAATAACACAAGTAGCCTCTTTCTCATAACCACTTTCTCAAAATCCATCTTTCAAATTTACCCTCCAATCTCCAAAAGTTTCTTTCCAACAAAGTGGTATCAAAGCTTGAAGATCCTTGCTAAGAAGATGGCTAACAATGGCATGGTCCCATTCCAAGTTCCAATGCTCAACAAGAGCAACTATGATAATTGGGGCATCAAGATGAAGGCTCTCCTTGGCTCGCAAGACGTATGAGAGATAGTGGAGAAAGGATACACCGAGTTGGAGAATGATAGTCTTTCTCAAGCACAAAGGGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAATCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACAGCGAAAGAAGCATGGGAGAAGCTTCAACCATCATACAAGGGAGCGGATCCCGTCAAGAAGGTACGTCTTCAAACTTTAAAAGCTGAGTTTGAAACATTGAATATGAAAGAAGGGGAAGCCATCTCCGACTATTTTTCTAGAGTTTTAACGGTCACCAATCAACTTAAGAAGAATGGTGAAAAGCTTGATGATGTAAAAATCATGGAGAAAATATAA

mRNA sequence

ATGTTGTTTTTCAACCTTCAACGCATCCTTCGTTTTTTGAGATTAACCTTCCAAATCTCTCAAATTGGTGACACAGCCCACTTTGAATTCTGTAGGTCCAATCTCTCCCTAAAAGTCTCCCACATTTCCCCTCACTTCATTGCAGAACTACGAATTCAATCTCTCTTCTTCGCCTATTACTTAACTGATGATTCACTGGATCATCATTGGACGATTTCGCTCAAGCAATTGTGCAATCATGTGAGAGACGGCATGTTTGCTTCTTCATTGGTCTTCTCTCTTACCAACGAAACCCCACCTCACGCACTCATTACATTTCAGACTTCATTGGAAGATTTCGCTCGAGCAGTTTTGCAATCATCCACTTCTGAGCTGGAAGATTTGTATCATCGTAAGATGATGTTGTCACATCTAGAAGATCAGCATAATGTAGGCGACTTTAACTATCAAACTTTTTGCATAGTTCCTTCACAAGAGTTCAAGGACATTGTAATAGAGTTTAGAAATATTTCCCCAGTTACTGTTACTTTGACGGATTCACAAGTGAAGTTTTCAAATACGGCATCCAACAAAGAGATTATTCTTACTGAAGCGGAAAGACGATGTACGATTACTATTCAAGCTGGGGAAGAAGTTCAGTTCCTAATCACGTTCCATCCCGCGACGTTTTTTCATGATTTGACATCTTTTGCTGAAACGGTTTCAAATATCAGTCCATCATCAGAGAGGAATATAACTCACATCTTCCCATATGGTGCAGTAGAGATCAGGAGCCCTGATTCTGACAAGACTTTTAAAGTGAATGGGCATCGACTCAAGATCTTGCACGAGGGTGAGTGTATTGCAGAGCTTGGGATTGTCGAGCTAGTTCTTTCGGACTATGAGGCGATGGAGTTGAACACTGATACGATCATAAGGAACGAGATGGTGACCTGTGGGAAAAAGAATGAAGGGAAGTTGTTCTCCCCTGCACTGATCACAAAATTATGCAGGAAGATAGTGGAGAAAGGATACACCGAGTTGGAGAATGATAGTCTTTCTCAAGCACAAAGGGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAATCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACAGCGAAAGAAGCATGGGAGAAGCTTCAACCATCATACAAGGGAGCGGATCCCGTCAAGAAGGTACGTCTTCAAACTTTAAAAGCTGAGTTTGAAACATTGAATATGAAAGAAGGGGAAGCCATCTCCGACTATTTTTCTAGAGTTTTAACGGTCACCAATCAACTTAAGAAGAATGGTGAAAAGCTTGATGATGTAAAAATCATGGAGAAAATATAA

Coding sequence (CDS)

ATGTTGTTTTTCAACCTTCAACGCATCCTTCGTTTTTTGAGATTAACCTTCCAAATCTCTCAAATTGGTGACACAGCCCACTTTGAATTCTGTAGGTCCAATCTCTCCCTAAAAGTCTCCCACATTTCCCCTCACTTCATTGCAGAACTACGAATTCAATCTCTCTTCTTCGCCTATTACTTAACTGATGATTCACTGGATCATCATTGGACGATTTCGCTCAAGCAATTGTGCAATCATGTGAGAGACGGCATGTTTGCTTCTTCATTGGTCTTCTCTCTTACCAACGAAACCCCACCTCACGCACTCATTACATTTCAGACTTCATTGGAAGATTTCGCTCGAGCAGTTTTGCAATCATCCACTTCTGAGCTGGAAGATTTGTATCATCGTAAGATGATGTTGTCACATCTAGAAGATCAGCATAATGTAGGCGACTTTAACTATCAAACTTTTTGCATAGTTCCTTCACAAGAGTTCAAGGACATTGTAATAGAGTTTAGAAATATTTCCCCAGTTACTGTTACTTTGACGGATTCACAAGTGAAGTTTTCAAATACGGCATCCAACAAAGAGATTATTCTTACTGAAGCGGAAAGACGATGTACGATTACTATTCAAGCTGGGGAAGAAGTTCAGTTCCTAATCACGTTCCATCCCGCGACGTTTTTTCATGATTTGACATCTTTTGCTGAAACGGTTTCAAATATCAGTCCATCATCAGAGAGGAATATAACTCACATCTTCCCATATGGTGCAGTAGAGATCAGGAGCCCTGATTCTGACAAGACTTTTAAAGTGAATGGGCATCGACTCAAGATCTTGCACGAGGGTGAGTGTATTGCAGAGCTTGGGATTGTCGAGCTAGTTCTTTCGGACTATGAGGCGATGGAGTTGAACACTGATACGATCATAAGGAACGAGATGGTGACCTGTGGGAAAAAGAATGAAGGGAAGTTGTTCTCCCCTGCACTGATCACAAAATTATGCAGGAAGATAGTGGAGAAAGGATACACCGAGTTGGAGAATGATAGTCTTTCTCAAGCACAAAGGGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAATCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACAGCGAAAGAAGCATGGGAGAAGCTTCAACCATCATACAAGGGAGCGGATCCCGTCAAGAAGGTACGTCTTCAAACTTTAAAAGCTGAGTTTGAAACATTGAATATGAAAGAAGGGGAAGCCATCTCCGACTATTTTTCTAGAGTTTTAACGGTCACCAATCAACTTAAGAAGAATGGTGAAAAGCTTGATGATGTAAAAATCATGGAGAAAATATAA

Protein sequence

MLFFNLQRILRFLRLTFQISQIGDTAHFEFCRSNLSLKVSHISPHFIAELRIQSLFFAYYLTDDSLDHHWTISLKQLCNHVRDGMFASSLVFSLTNETPPHALITFQTSLEDFARAVLQSSTSELEDLYHRKMMLSHLEDQHNVGDFNYQTFCIVPSQEFKDIVIEFRNISPVTVTLTDSQVKFSNTASNKEIILTEAERRCTITIQAGEEVQFLITFHPATFFHDLTSFAETVSNISPSSERNITHIFPYGAVEIRSPDSDKTFKVNGHRLKILHEGECIAELGIVELVLSDYEAMELNTDTIIRNEMVTCGKKNEGKLFSPALITKLCRKIVEKGYTELENDSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDVKIMEKI
Homology
[Close]
BLAST of Lag0016139 vs. NCBI nr
Match: XP_022566413.1 (uncharacterized protein LOC111210365, partial [Brassica napus])

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-45
Identity = 100/126 (79.37%), Postives = 112/126 (88.89%), Query Frame = 0 

Query: 332 KIVEKGYTELENDS-LSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           +IVEKG+ E ENDS LSQ Q+DGLRDSRKRDKKAL LIYQGLD+D FEK++ AKT+KEAW
Sbjct: 51  EIVEKGFNEPENDSGLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVAGAKTSKEAW 110

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKLQ SYKGA+ VKKVRLQTL+ EFE L MKEGE ISDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 111 EKLQTSYKGAEQVKKVRLQTLRGEFEALQMKEGELISDYFSRVLTVTNNLKRNGEKLDDV 170

Query: 452 KIMEKI 457
           +IMEK+
Sbjct: 171 RIMEKV 176

[Close]
BLAST of Lag0016139 vs. NCBI nr
Match: KYP37028.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-45
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. NCBI nr
Match: KYP69041.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-45
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. NCBI nr
Match: KYP66220.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-45
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 25  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 84

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 85  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 144

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 145 RIMEKI 150

[Close]
BLAST of Lag0016139 vs. NCBI nr
Match: KYP38574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-45
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match: A0A151TPU3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_022691 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match: A0A151RPT4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_033991 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match: A0A151TGP0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_012507 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 25  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 84

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 85  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 144

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 145 RIMEKI 150

[Close]
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match: A0A151R7G0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_040164 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match: A0A151R357 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_041812 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 332 KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAW 391
           ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAW
Sbjct: 36  EVVEKGHTEPENVESLSQAQKDSLRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAW 95

Query: 392 EKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQLKKNGEKLDDV 451
           EKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYFSRVLTVTN LK+NGEKLDDV
Sbjct: 96  EKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDV 155

Query: 452 KIMEKI 457
           +IMEKI
Sbjct: 156 RIMEKI 161

[Close]
BLAST of Lag0016139 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-15
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 332 KIVEKGYTELEND-SLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKE 389
           +IVEKG+ E EN+ SLSQ Q+DGLRDSRKRDKKAL LIYQGLD+D FEK+ EA +AK+
Sbjct: 36  EIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKD 93

The following BLAST results are available for this feature:
BLAST of Lag0016139 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022566413.11.5e-4579.37uncharacterized protein LOC111210365, partial [Brassica napus][more]
KYP37028.12.0e-4580.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
KYP69041.12.0e-4580.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
KYP66220.12.0e-4580.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
KYP38574.12.0e-4580.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
BLAST of Lag0016139 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0016139 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151TPU39.6e-4680.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
A0A151RPT49.6e-4680.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
A0A151TGP09.6e-4680.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
A0A151R7G09.6e-4680.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
A0A151R3579.6e-4680.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
BLAST of Lag0016139 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G48720.12.3e-1572.41unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 358..455
e-value: 1.8E-19
score: 69.8
NoneNo IPR availableGENE3D3.70.10.10coord: 1..245
e-value: 1.2E-13
score: 52.9
NoneNo IPR availablePANTHERPTHR34222:SF44DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A-LIKEcoord: 348..456
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 348..456

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016139.1Lag0016139.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding