Lag0015943 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015943
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr12: 29832107 .. 29833251 (+)
RNA-Seq ExpressionLag0015943
SyntenyLag0015943
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAATATGTACACCTTCAGGGAAGACAAGGGCAAAGGTATTGCAGAAGCATCGCCAGAACCCGAAGACATGGAAACAGAGGAGCCACAGTTGACGTATAACCGTTTCATCAATAACCTTGCTCGAGCAAAGTATGTCGAGCTGCTGAGAAGATACTTTTTGTTTGAACGCGGGTTTGGCGATGATCTGCCACGTTTCTTGACAACCAGAATAGCAAACCATGGTTGGAGTAAGTTTTGTGCAAAGCTGGAACCGGTCAATTCCAACATTGTTCGAGAGTTCTATGCAAATATTGATGATCAAGAATGATTTCAGGCTATTGTTCGAGGAGTGTCTGTTGATTGGAGCCCAGGAGCTATCAATTCTTTATTCAACCTCCAAGACTTTCCGCACGCAGGTTTTAATGAGATGGTGGTAGCGCCATCAAATGATAGGTTAAATGCAGCTGTTAGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTATCGAAGACAGAAAAGCATACATTCCAAACAACTTATCTGAAGAGTGAAGCCAATACATGGATGGGTTTCATCAAGTTGAGCTTGTTGCCGACAACTCATGATTCAACAGTGTCTCGAGACCAGGTACTGCTTGTGTTTGCTATTCTTCACTCGATGAGTATAGGTTAAATGCGGTTGTTAGAGAGGTTGGCATCGAGGGGGCTTAGTGGAGACTGTCGAAGACGAAAAGCGTACATTCCAAACAACTAATCTGAAGAGTGAAGCCAATACATGGATGAGTTTCATCAAGTTGTGCTTGCTGCTGACAACTCATGATTCAACAGTGTCTCGAGACCAGGTACTACTTGTGTTTGCTATTCTTCGCTCGATGAGCATTGATGTGGGTAAAATCATTTCTACTGAGATTTATGAATGCTGGCGGAAAAAGGTTGGGAAACTAATTTTCCCTAACACAATAACAATGTTGAATTTTCTTATCTTAGTTGAATTCCTCGCGAAAAATGCTTTAAAATGAGTATAATATGTCTATAGGTCCTCAACGAAGCTTTGGAAGCAATTTGGGGCTTAAACGAGCGAAACCGAAGCGTAAAATGACCATTCTGCCCCTGGAGCTTCATCAGCGTCGAGACGCTTGCGTCATAGTGTCGCGACGCTAG

mRNA sequence

ATGTGTAATATGTACACCTTCAGGGAAGACAAGGGCAAAGGTATTGCAGAAGCATCGCCAGAACCCGAAGACATGGAAACAGAGGAGCCACAGTTGACGTATAACCGTTTCATCAATAACCTTGCTCGAGCAAAGTATGTCGAGCTGCTGAGAAGATACTTTTTGTTTGAACGCGGGTTTGGCGATGATCTGCCACGTTTCTTGACAACCAGAATAGCAAACCATGGTTGGAGTAAGTTTTGTGCAAAGCTGGAACCGGCTATTGTTCGAGGAGTGTCTGTTGATTGGAGCCCAGGAGCTATCAATTCTTTATTCAACCTCCAAGACTTTCCGCACGCAGGTTTTAATGAGATGGTGGTAGCGCCATCAAATGATAGGTTAAATGCAGCTGTTAGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTATCGAAGACAGAAAAGCATACATTCCAAACAACTTATCTGAAGAGTGAAGCCAATACATGGATGGGTTTCATCAAGTTGAGCTTGTTGCCGACAACTCATGATTCAACAGTGTCTCGAGACCAGAGTGAAGCCAATACATGGATGAGTTTCATCAAGTTGTGCTTGCTGCTGACAACTCATGATTCAACAGTGTCTCGAGACCAGGTACTACTTGTGTTTGCTATTCTTCGCTCGATGAGCATTGATGTGGGTCCTCAACGAAGCTTTGGAAGCAATTTGGGGCTTAAACGAGCGAAACCGAAGCGTAAAATGACCATTCTGCCCCTGGAGCTTCATCAGCGTCGAGACGCTTGCGTCATAGTGTCGCGACGCTAG

Coding sequence (CDS)

ATGTGTAATATGTACACCTTCAGGGAAGACAAGGGCAAAGGTATTGCAGAAGCATCGCCAGAACCCGAAGACATGGAAACAGAGGAGCCACAGTTGACGTATAACCGTTTCATCAATAACCTTGCTCGAGCAAAGTATGTCGAGCTGCTGAGAAGATACTTTTTGTTTGAACGCGGGTTTGGCGATGATCTGCCACGTTTCTTGACAACCAGAATAGCAAACCATGGTTGGAGTAAGTTTTGTGCAAAGCTGGAACCGGCTATTGTTCGAGGAGTGTCTGTTGATTGGAGCCCAGGAGCTATCAATTCTTTATTCAACCTCCAAGACTTTCCGCACGCAGGTTTTAATGAGATGGTGGTAGCGCCATCAAATGATAGGTTAAATGCAGCTGTTAGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTATCGAAGACAGAAAAGCATACATTCCAAACAACTTATCTGAAGAGTGAAGCCAATACATGGATGGGTTTCATCAAGTTGAGCTTGTTGCCGACAACTCATGATTCAACAGTGTCTCGAGACCAGAGTGAAGCCAATACATGGATGAGTTTCATCAAGTTGTGCTTGCTGCTGACAACTCATGATTCAACAGTGTCTCGAGACCAGGTACTACTTGTGTTTGCTATTCTTCGCTCGATGAGCATTGATGTGGGTCCTCAACGAAGCTTTGGAAGCAATTTGGGGCTTAAACGAGCGAAACCGAAGCGTAAAATGACCATTCTGCCCCTGGAGCTTCATCAGCGTCGAGACGCTTGCGTCATAGTGTCGCGACGCTAG

Protein sequence

MCNMYTFREDKGKGIAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRIANHGWSKFCAKLEPAIVRGVSVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLLPTTHDSTVSRDQSEANTWMSFIKLCLLLTTHDSTVSRDQVLLVFAILRSMSIDVGPQRSFGSNLGLKRAKPKRKMTILPLELHQRRDACVIVSRR
Homology
BLAST of Lag0015943 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 79.3 bits (194), Expect = 5.4e-11
Identity = 57/192 (29.69%), Postives = 81/192 (42.19%), Query Frame = 0

Query: 13  KGIAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRI 72
           K +A  + +    ETE  +  Y   I N    + +   + + L        LP F+   I
Sbjct: 4   KRVARKAHKAVKFETEAAETRYENNIQN----RPLNAEKGFVLDNSETMGQLP-FIAQVI 63

Query: 73  ANHGWSKFCAKLEPAI--------------------VRGVSVDWSPGAINSLFNLQDFPH 132
             H W +FCA  E  I                    VRGV V WS  AIN++F L D P 
Sbjct: 64  TQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PV 123

Query: 133 AGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLL 185
              +E +   +   L   +  V + GA+W +S    +T   + L   A  W  F+K  LL
Sbjct: 124 DEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLL 183

BLAST of Lag0015943 vs. NCBI nr
Match: EXB77427.1 (hypothetical protein L484_000483 [Morus notabilis])

HSP 1 Score: 78.6 bits (192), Expect = 9.3e-11
Identity = 54/203 (26.60%), Postives = 96/203 (47.29%), Query Frame = 0

Query: 11  KGKGI--------AEASPEPEDMETE-----EPQLTYNRFINNLARAKYVELLRRYFLFE 70
           KGKG+        +E+ P  E+ E +     E +  ++  +N   RA ++E   R F++ 
Sbjct: 9   KGKGVRILIDSDSSESDPATENAEVKKFASPEAEHRFDTCMNK--RALHME---RGFVYR 68

Query: 71  RGFGDDLPRFLTTRIANHGWSKFC---------------AKLEPAIVRGVSVDWSPGAIN 130
           RG     P F+ + IA H W  FC               A+ +   VRG  + ++  AIN
Sbjct: 69  RGRPSGYPSFIHSVIAAHKWHSFCHNPHAATVQLVREYAAEPDTIFVRGQLIPFTSEAIN 128

Query: 131 SLFNLQDFPHAGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANT 186
           SL++L D     FN    + + D+L+  + E+ +EG +WR +     TF    L+  +  
Sbjct: 129 SLYDLPDV-EDHFNNFADSLNEDQLDEVINELCVEGTEWRRATRGSMTFPRECLQPGSKI 188

BLAST of Lag0015943 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida])

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-10
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 0

Query: 55  LFERGF---GDDLPRFLTTRIANHGWSKF--CAKL------------------EPAIVRG 114
           + E GF      LP F T+ +  HGW  F  C  +                  +  I++G
Sbjct: 177 MMEMGFIPASTPLPDF-TSVVLEHGWETFYQCLSIIIPTVVRAFYKGRLHGTKDAVIMKG 236

Query: 115 VSVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTF 174
             V +S   IN L+ ++D P A  N+++  P  +++  A+R +   G QW +S     T 
Sbjct: 237 CIVPFSARDINELYKMKDIPDASGNKIIDDPQEEKMEDALRTLTQSGTQWSVSLKGIKTL 296

Query: 175 QTTYLKSEANTWMGFIKLSLLPTTHDSTVSRDQ 185
            ++ L  EA  W+  +K  ++PT+HD TVSRD+
Sbjct: 297 ASSKLLPEARLWVYLVKRRIIPTSHDKTVSRDR 328

BLAST of Lag0015943 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 57/192 (29.69%), Postives = 79/192 (41.15%), Query Frame = 0

Query: 13  KGIAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRI 72
           K +A  + +    ETE     Y   I N    + +   + + L        LP F+   I
Sbjct: 13  KRVARKAHKAVKFETEAAATRYENNIQN----RPLNAEKGFVLDNSETMGQLP-FIAQVI 72

Query: 73  ANHGWSKFCAKLEPAI--------------------VRGVSVDWSPGAINSLFNLQDFPH 132
             H W +FCA  E  I                    VRGV V WS  AIN++F L D P 
Sbjct: 73  TQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PV 132

Query: 133 AGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLL 185
              +E +   +   L   +  V   GA+W +S    +T   + L   A  W  F+K  LL
Sbjct: 133 DEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLL 192

BLAST of Lag0015943 vs. NCBI nr
Match: XP_038898613.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-10
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 0

Query: 55  LFERGF---GDDLPRFLTTRIANHGWSKF--CAK-LEPAIV-----------------RG 114
           L E GF      LP  +T+ I  HGW  F  C   + P +V                 +G
Sbjct: 209 LIEMGFYPAPTPLPDLITSIIVEHGWDTFYQCPSIIVPQVVHDFYRGHLHENRDAVTFKG 268

Query: 115 VSVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTF 174
            +V +S   IN L+ ++D P A  N+++  P+ + +  A++ +   G +W +S     T 
Sbjct: 269 ETVYFSTKNINGLYQMRDNPDAPGNKIIDDPTEELMRNALKVLAQPGTRWTVSPKGIRTL 328

Query: 175 QTTYLKSEANTWMGFIKLSLLPTTHDSTVSRDQ 185
           ++  L S+   W+  +K  L+PTTHD TVS+DQ
Sbjct: 329 ESKSLLSKGRLWVYLVKKQLIPTTHDRTVSKDQ 361

BLAST of Lag0015943 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11
Identity = 57/192 (29.69%), Postives = 81/192 (42.19%), Query Frame = 0

Query: 13  KGIAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRI 72
           K +A  + +    ETE  +  Y   I N    + +   + + L        LP F+   I
Sbjct: 4   KRVARKAHKAVKFETEAAETRYENNIQN----RPLNAEKGFVLDNSETMGQLP-FIAQVI 63

Query: 73  ANHGWSKFCAKLEPAI--------------------VRGVSVDWSPGAINSLFNLQDFPH 132
             H W +FCA  E  I                    VRGV V WS  AIN++F L D P 
Sbjct: 64  TQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PV 123

Query: 133 AGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLL 185
              +E +   +   L   +  V + GA+W +S    +T   + L   A  W  F+K  LL
Sbjct: 124 DEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLL 183

BLAST of Lag0015943 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-10
Identity = 57/192 (29.69%), Postives = 79/192 (41.15%), Query Frame = 0

Query: 13  KGIAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRI 72
           K +A  + +    ETE     Y   I N    + +   + + L        LP F+   I
Sbjct: 13  KRVARKAHKAVKFETEAAATRYENNIQN----RPLNAEKGFVLDNSETMGQLP-FIAQVI 72

Query: 73  ANHGWSKFCAKLEPAI--------------------VRGVSVDWSPGAINSLFNLQDFPH 132
             H W +FCA  E  I                    VRGV V WS  AIN++F L D P 
Sbjct: 73  TQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PV 132

Query: 133 AGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLL 185
              +E +   +   L   +  V   GA+W +S    +T   + L   A  W  F+K  LL
Sbjct: 133 DEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLL 192

BLAST of Lag0015943 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.5e-10
Identity = 56/189 (29.63%), Postives = 82/189 (43.39%), Query Frame = 0

Query: 15  IAEASPEPEDMETEEPQLTYNRFINNLARAKYVELLRRYFLFERGFGDDLPRFLTTRIAN 74
           +A  + +    E++  ++ Y   I N  R   VE   + F+++     + P F+   I  
Sbjct: 36  VARNASKAVKFESKAAEIRYEENIQN--RPLSVE---KEFVWDNSKPLEQPPFIADVIIQ 95

Query: 75  HGWSKFCAKLEPAIV--------------------RGVSVDWSPGAINSLFNLQDFPHAG 134
           H W  FCA  E  IV                    RGV V  S  AIN++F+L D P   
Sbjct: 96  HNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGD-PIDE 155

Query: 135 FNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWMGFIKLSLLPT 184
            +E V   +   L   +  V I GA+W +S    +T   + L   A  W  F+K  LLPT
Sbjct: 156 HSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPT 215

BLAST of Lag0015943 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.2e-09
Identity = 40/140 (28.57%), Postives = 64/140 (45.71%), Query Frame = 0

Query: 65  PRFLTTRIANHGWSKFCA--------------------KLEPAIVRGVSVDWSPGAINSL 124
           P F+T  I  HGW +FC                       E   V+ V V ++  AINS+
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 125 FNLQDFPHAGFNEMVVAPSNDRLNAAVREVGIEGAQWRLSKTEKHTFQTTYLKSEANTWM 184
           F L++     + +     ++++L   + EV IEGA W++S    +T     LK  A  W 
Sbjct: 64  FGLEEVVDE-YVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWY 123

BLAST of Lag0015943 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08
Identity = 47/164 (28.66%), Postives = 79/164 (48.17%), Query Frame = 0

Query: 46  YVELLRRYFLFERG---FGDDLPRFLTTRIANHGWSKF---CAKLEP------------- 105
           + E L ++F+ E+G   F   LP FLT+ I    W +F      + P             
Sbjct: 120 FAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINT 179

Query: 106 ----AIVRGVSVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDRLNAAVREVGIEGAQ 165
               AIV+G  V++ P  +N L+ L+     +  F E    PS+  +  A+  V   G +
Sbjct: 180 ERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYPIFKE----PSDIDMQNALERVAWPGMK 239

Query: 166 WRLSKTEKHTFQTTYLKSEANTWMGFIKLSLLPTTHDSTVSRDQ 185
           W ++  +K+      LK+ A+ W+ FIK +L+PT HD+T+S ++
Sbjct: 240 WDITPIKKYQLFPHNLKTTASVWLVFIKKNLMPTRHDNTISLER 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON35554.15.4e-1129.69hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
EXB77427.19.3e-1126.60hypothetical protein L484_000483 [Morus notabilis][more]
XP_038904385.12.1e-1029.41uncharacterized protein LOC120090747 [Benincasa hispida][more]
PON46472.13.5e-1029.69hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
XP_038898613.16.0e-1030.07LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5AGA52.6e-1129.69Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5BCG41.7e-1029.69Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DAQ26.5e-1029.63Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... [more]
W9QTD94.2e-0928.57Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1[more]
A0A5A7TZE02.7e-0828.66Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015943.1Lag0015943.1mRNA