Lag0015596 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015596
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPolypyrimidine tract-binding protein-like protein 3
Locationchr12: 17268550 .. 17272890 (+)
RNA-Seq ExpressionLag0015596
SyntenyLag0015596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATCTGGTGCAAATGGTTTGGGCATGATGATACAATGAACCGTTGCAAGCCTGTGCCAAGGAAACTCAATGTTGAAACCTCGTGAGGCATTGCATGTAATGCAACCATTAATTGATTCAAGTTCTGCCTTCCTAAATCAGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACGTAACCTGTGAAACAAGAGAAAACTAAGTACCGACGTAGTGCTTGTCACACCAACTCCAATGTTTAAGTCAGTTGGGAGATGATGGGAGATCATAAGCAAGTAAATAATAATATCGAAGAAAATAGATACCAAGTGGAGTCCCTTACCTTGGGGCGAACCTCTTCTATTTATAACTGAAATTAGGGTTCTTCCTTTTAGGAGGAGGAGTAGCCCTAAAAATTGATTCAGGCCCATTGGGCCTCCGTGGGCTTGTTTCTCTTCTGGACTTCTATCATTCTAACTTTTTTAGAGAGTTAGGTCCAAATTCACCACTACAAGAAAAAAGCTATTTGCCGACGCAAATGTCTCTCGACGCATAAAAACGCGTAGGGAGAAAGATATATCCCGACGCACAGTAACCAACATGGGGAGAAACAATTACGTGGAATTTCTACCGATGTAGTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGGTAATCAGTTCTCTCCCTCCCTACACTATAGATCCTTAATCTCCACGCCTTAATCATGTTTTATAATCAGTATAATTTTGTTCTTTACTTTATTGATGGATTTTTTCTTTTAAACTTACTGCTATGCTGCCTCGACGAAAGTTATAACGGGAAGGAAAGTTTTGAAGCCACCACGCTTGTGCGGCTGACTTTGGATTTAAATCAACTGAACATAAAAGATGATTCAGATTTAAATTCTTTTGGTTAAAGTTTTGTGAAATTCTGATTTAATGGGAAATTAAAATAAGTATAGGGAAATTAAAATTTAATATACCTATACCAAGTGAAATTCTGATTTAATGGGAGATTGTCAGAGAGCCAGGGCTTTCTGAATTTGTGATTGGGATCGAAGAACTCGTACTTTTCACCATCCAAACCAATCTTGTAAAAGCTTCTCTTTGGCTTTTGAATAAGGACGCTTGCTTGGAAAATGGCGTGAACAATTAAACCCAGTCAATTGTTCAAGTGGCAATTAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAACATTGAAGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGTCAGTAGCTTATACTCTCAGATTTGCACTTTTTTTGGTTAGGGGAAGGAAAATTTTCCATTGAATTATACAAATAGAGCAAGTCTTTTAATGCAATCATTATCACGAAGGATTAGGCATTAATGATGTCTTGGAAAACCTTTAGCCATGAGGATTATCTTAAGTAGATATTTCTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAATTGATTTTTTCTTAATACCTTGTATAGGCTAGGCGTGTTCTTGTCCACCATATGGGCAATAATTAAAGAAACATTAAACTCTTAAATTTATGAAAATATCAATTAAATATCAATCAATGAATATTTCTTGAAATAAAATTCACCAAAAAACACAAGAACTCATTAAACTTGTAGGTTTCTATCTGAACTTGAGGAGGCGTTTTTCAAGAAGATAGAAAGGGTTTGGGCCTAGAAGAGAATCACAGAGGGACCTTATACTGAAAGAATAAATTTGATTATAAAAACAATTTTTTTTTTTTCGAGATGATAAAAACAAAATTTATCAACCAATATGCTTTTACATATATATATATATATATATATGACTTGGGAATAGTGAATTTACCAATATGCTTCTGGTTGACAAAGGCATGAAGAATATGGCCACGAGTCTTCACACGTGATTTAACATTCTTGCCAAAAAGTGGATCGGATCCATCAAGATGGAAACTGATTGAGCATGTCGAAATGAAAATTTTGTGTAAATGCCCCTTTTCTTTTTTGTGTAAATGTTTTTAAGGTTACTTGCTCACAGATTATGGATTTTATTGTGCAGTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGTTTGTAGCATGACTAATCCTCACTTCATTTTATCTTTTTTGCATCTTGGATTCTTATTAGTATGGTTATTTCTTCTCGATATTGTTCCAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAGTATGTACCACCACATATTAATCTTTTATAATGTTTGCTCCTTTCTTTTGAAATTTTATTTTAATTTTGCGAGAATTCATGCCATTTTTAAAGTTTTAAGAACCATGGATTTAGGTATATTTGGTATGGTTTTGAGCTAATTAGAAATTTGGATGTTGTTTGTTTGTGTTTATCAAGATTTGTTGTTGTCACAACAAGAAGCTGTTACTCTTAGTGTCTGTTGTTAAAATTAACAATTTCGTGGAAATGTTTTCGCTCTTTTTGCTATTGGAAACTTCTTACAAGCTGGATGTAGCTGCTATGCATTTCTTCCCTAAATTAAAGCCTTTCTTCTTAAAGGTCATAATTGTTTGGTGAAATTCTCACCTAGGATAGTAGATAAAGTTCTCATAGTTCTGGTGAATCTCTGTATGTTGAAAGAGGTTGTATTCAACAAGAAAAATGATTATTCCATTAAGTGAAAAAAATGGATAAAATCAAGCACTGGGTTTTAAGATTTAGATTTGATTCTCTAAGGTTCTTTGCTCCTAATTTGCTCATACTTCTGTATGCTTCTGGATTCATGATTGGGCATTAGAACAATTGTTTTACAATTCCTTGGGTATAATTAGAATGAGAGATGACCTCCAAGACTGCTGGAGGTTTGATTCCCTTGATAGGTGTGGCGCGAGTTGAGGTCTTTGAATGCACATTGCACATAACTAATTTGTTGTTGGAAAAATTTTGAGCAGTTATAGAAGATTACTTTAATATTTTCAAGAAAATGCAGTATTTGCTGCCCTGAAGCATGACTTGACATTGAATACAGTATTTATCTACATTTATGTTTGACAGGTGAATTGAGTTTCTTATTTGTTGACATGGTTCATAAGATTTAATCTTTCGCTGCCGCCTCTCTCTTCGTGTATTTGGTAAATATATCTCTAGATATGGGTTTTTCCTTTTTGGTTTTTACAGTTTAACATAATTGTGTTAATGTAACGATGGCTGAAGTAATTCGTTCTTTAAGCTTGGTCAGTGAATAATTCTTTGCAAGTCAGCATGGTGGTTGTTCTGATAAAGTTCTAAAGTTGCTTTAAAAACTGAAGCACCTTCTTTTTCATTGGATAAACCACATTAAATAGCATAAATAGCATAATGGATGTTTTGTGTAATGATGCATGGAGATTCTTGTTAGCCTTTAGTTGGAAGTTAACTATAGGGTTATAAGGATGTTTTGTGTGATTCATCATTTAACTTTCTGAATTTGACTTCGCGAGTTCTGGTGGTTTTGTGTCAGCTGCTGTTTTGATCTTATTCTTGTTGGTTCTTGAGTTGTTTGAAGCATTCGAGTTCTAAGATTTTGCTTTTACTGAAAATCAGATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA

mRNA sequence

ATGCCATCTGGTGCAAATGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGCATGAAGAATATGGCCACGAGTCTTCACACTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA

Coding sequence (CDS)

ATGCCATCTGGTGCAAATGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGCATGAAGAATATGGCCACGAGTCTTCACACTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA

Protein sequence

MPSGANDNTTIYSLVSRPSPIVASNSPQTAPTAKIWPRDGKDSLNASAEVVSLDAANHRVERDSFKSVFADVISDGVGRDIISLDAYNEGVEREALPTPSLTTSAETLFKALAPIFFSSYSTKSKDPPGLRSSSTAVCALFLPSPLLASGRLFSLYLRCLQHPAGDRLPPCQIVSRDFTVSALSVFLQLAERQKSSSSCPLSLEGSTREKKKPTPEDPGMKNMATSLHTLDELQVNYNNKCSRDFTNPNLPSEPKGQSSQMNNACGQISPRQISVTLESA
Homology
[Close]
BLAST of Lag0015596 vs. NCBI nr
Match: GER39951.1 (polypyrimidine tract-binding protein-like protein [Striga asiatica])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-05
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 226 SLHTLDELQVNYNNKCSRDFTNPNLPSEPKGQSSQMNNA 265
           S  +LDELQVNYNN+ SRDFTNP+LPSE +G+SSQM NA
Sbjct: 205 SFSSLDELQVNYNNERSRDFTNPSLPSEQRGKSSQMGNA 243

[Close]
BLAST of Lag0015596 vs. NCBI nr
Match: XP_023525438.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 177 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 207

[Close]
BLAST of Lag0015596 vs. NCBI nr
Match: XP_022932099.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita moschata] >KAG6607582.1 Polypyrimidine tract-binding protein-like 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 177 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 207

[Close]
BLAST of Lag0015596 vs. NCBI nr
Match: XP_023525437.1 (polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 178 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 208

[Close]
BLAST of Lag0015596 vs. NCBI nr
Match: XP_022932097.1 (polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 178 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 208

[Close]
BLAST of Lag0015596 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.9e-05
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSS 260
           L+ELQVNYNN  SRD+TNPNLP+E KG+SS
Sbjct: 177 LEELQVNYNNDRSRDYTNPNLPAEQKGRSS 206

[Close]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A5A7Q7E4 (Polypyrimidine tract-binding protein-like protein OS=Striga asiatica OX=4170 GN=STAS_16597 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 226 SLHTLDELQVNYNNKCSRDFTNPNLPSEPKGQSSQMNNA 265
           S  +LDELQVNYNN+ SRDFTNP+LPSE +G+SSQM NA
Sbjct: 205 SFSSLDELQVNYNNERSRDFTNPSLPSEQRGKSSQMGNA 243

[Close]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1I765 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 177 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 207

[Close]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1I9W1 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 178 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 208

[Close]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1EVP5 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 178 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 208

[Close]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1EW29 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSSQ 261
           LDELQVNYNN+ SRDFTNPNLPSEPKG+SSQ
Sbjct: 177 LDELQVNYNNERSRDFTNPNLPSEPKGRSSQ 207

[Close]
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSS 260
           L+ELQVNYNN  SRD+TNPNLP+E KG+SS
Sbjct: 177 LEELQVNYNNDRSRDYTNPNLPAEQKGRSS 206

[Close]
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.2 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSS 260
           L+ELQVNYNN  SRD+TNPNLP+E KG+SS
Sbjct: 177 LEELQVNYNNDRSRDYTNPNLPAEQKGRSS 206

[Close]
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.3 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 230 LDELQVNYNNKCSRDFTNPNLPSEPKGQSS 260
           L+ELQVNYNN  SRD+TNPNLP+E KG+SS
Sbjct: 175 LEELQVNYNNDRSRDYTNPNLPAEQKGRSS 204

The following BLAST results are available for this feature:
BLAST of Lag0015596 vs. NCBI nr
Match NameE-valueIdentityDescription
GER39951.12.7e-0574.36polypyrimidine tract-binding protein-like protein [Striga asiatica][more]
XP_023525438.14.7e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita pepo subsp.... [more]
XP_022932099.14.7e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita moschata] >... [more]
XP_023525437.14.7e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita pepo subsp.... [more]
XP_022932097.14.7e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita moschata][more]
BLAST of Lag0015596 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6ICX44.9e-0576.67Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7Q7E41.3e-0574.36Polypyrimidine tract-binding protein-like protein OS=Striga asiatica OX=4170 GN=... [more]
A0A6J1I7652.3e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita maxima OX... [more]
A0A6J1I9W12.3e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita maxima OX... [more]
A0A6J1EVP52.3e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita moschata ... [more]
A0A6J1EW292.3e-0590.32polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita moschata ... [more]
BLAST of Lag0015596 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G43190.13.5e-0676.67polypyrimidine tract-binding protein 3 [more]
AT1G43190.23.5e-0676.67polypyrimidine tract-binding protein 3 [more]
AT1G43190.33.5e-0676.67polypyrimidine tract-binding protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015596.1Lag0015596.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding