Lag0015596 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATCTGGTGCAAATGGTTTGGGCATGATGATACAATGAACCGTTGCAAGCCTGTGCCAAGGAAACTCAATGTTGAAACCTCGTGAGGCATTGCATGTAATGCAACCATTAATTGATTCAAGTTCTGCCTTCCTAAATCAGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACGTAACCTGTGAAACAAGAGAAAACTAAGTACCGACGTAGTGCTTGTCACACCAACTCCAATGTTTAAGTCAGTTGGGAGATGATGGGAGATCATAAGCAAGTAAATAATAATATCGAAGAAAATAGATACCAAGTGGAGTCCCTTACCTTGGGGCGAACCTCTTCTATTTATAACTGAAATTAGGGTTCTTCCTTTTAGGAGGAGGAGTAGCCCTAAAAATTGATTCAGGCCCATTGGGCCTCCGTGGGCTTGTTTCTCTTCTGGACTTCTATCATTCTAACTTTTTTAGAGAGTTAGGTCCAAATTCACCACTACAAGAAAAAAGCTATTTGCCGACGCAAATGTCTCTCGACGCATAAAAACGCGTAGGGAGAAAGATATATCCCGACGCACAGTAACCAACATGGGGAGAAACAATTACGTGGAATTTCTACCGATGTAGTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGGTAATCAGTTCTCTCCCTCCCTACACTATAGATCCTTAATCTCCACGCCTTAATCATGTTTTATAATCAGTATAATTTTGTTCTTTACTTTATTGATGGATTTTTTCTTTTAAACTTACTGCTATGCTGCCTCGACGAAAGTTATAACGGGAAGGAAAGTTTTGAAGCCACCACGCTTGTGCGGCTGACTTTGGATTTAAATCAACTGAACATAAAAGATGATTCAGATTTAAATTCTTTTGGTTAAAGTTTTGTGAAATTCTGATTTAATGGGAAATTAAAATAAGTATAGGGAAATTAAAATTTAATATACCTATACCAAGTGAAATTCTGATTTAATGGGAGATTGTCAGAGAGCCAGGGCTTTCTGAATTTGTGATTGGGATCGAAGAACTCGTACTTTTCACCATCCAAACCAATCTTGTAAAAGCTTCTCTTTGGCTTTTGAATAAGGACGCTTGCTTGGAAAATGGCGTGAACAATTAAACCCAGTCAATTGTTCAAGTGGCAATTAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAACATTGAAGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGTCAGTAGCTTATACTCTCAGATTTGCACTTTTTTTGGTTAGGGGAAGGAAAATTTTCCATTGAATTATACAAATAGAGCAAGTCTTTTAATGCAATCATTATCACGAAGGATTAGGCATTAATGATGTCTTGGAAAACCTTTAGCCATGAGGATTATCTTAAGTAGATATTTCTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAATTGATTTTTTCTTAATACCTTGTATAGGCTAGGCGTGTTCTTGTCCACCATATGGGCAATAATTAAAGAAACATTAAACTCTTAAATTTATGAAAATATCAATTAAATATCAATCAATGAATATTTCTTGAAATAAAATTCACCAAAAAACACAAGAACTCATTAAACTTGTAGGTTTCTATCTGAACTTGAGGAGGCGTTTTTCAAGAAGATAGAAAGGGTTTGGGCCTAGAAGAGAATCACAGAGGGACCTTATACTGAAAGAATAAATTTGATTATAAAAACAATTTTTTTTTTTTCGAGATGATAAAAACAAAATTTATCAACCAATATGCTTTTACATATATATATATATATATATATGACTTGGGAATAGTGAATTTACCAATATGCTTCTGGTTGACAAAGGCATGAAGAATATGGCCACGAGTCTTCACACGTGATTTAACATTCTTGCCAAAAAGTGGATCGGATCCATCAAGATGGAAACTGATTGAGCATGTCGAAATGAAAATTTTGTGTAAATGCCCCTTTTCTTTTTTGTGTAAATGTTTTTAAGGTTACTTGCTCACAGATTATGGATTTTATTGTGCAGTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGTTTGTAGCATGACTAATCCTCACTTCATTTTATCTTTTTTGCATCTTGGATTCTTATTAGTATGGTTATTTCTTCTCGATATTGTTCCAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAGTATGTACCACCACATATTAATCTTTTATAATGTTTGCTCCTTTCTTTTGAAATTTTATTTTAATTTTGCGAGAATTCATGCCATTTTTAAAGTTTTAAGAACCATGGATTTAGGTATATTTGGTATGGTTTTGAGCTAATTAGAAATTTGGATGTTGTTTGTTTGTGTTTATCAAGATTTGTTGTTGTCACAACAAGAAGCTGTTACTCTTAGTGTCTGTTGTTAAAATTAACAATTTCGTGGAAATGTTTTCGCTCTTTTTGCTATTGGAAACTTCTTACAAGCTGGATGTAGCTGCTATGCATTTCTTCCCTAAATTAAAGCCTTTCTTCTTAAAGGTCATAATTGTTTGGTGAAATTCTCACCTAGGATAGTAGATAAAGTTCTCATAGTTCTGGTGAATCTCTGTATGTTGAAAGAGGTTGTATTCAACAAGAAAAATGATTATTCCATTAAGTGAAAAAAATGGATAAAATCAAGCACTGGGTTTTAAGATTTAGATTTGATTCTCTAAGGTTCTTTGCTCCTAATTTGCTCATACTTCTGTATGCTTCTGGATTCATGATTGGGCATTAGAACAATTGTTTTACAATTCCTTGGGTATAATTAGAATGAGAGATGACCTCCAAGACTGCTGGAGGTTTGATTCCCTTGATAGGTGTGGCGCGAGTTGAGGTCTTTGAATGCACATTGCACATAACTAATTTGTTGTTGGAAAAATTTTGAGCAGTTATAGAAGATTACTTTAATATTTTCAAGAAAATGCAGTATTTGCTGCCCTGAAGCATGACTTGACATTGAATACAGTATTTATCTACATTTATGTTTGACAGGTGAATTGAGTTTCTTATTTGTTGACATGGTTCATAAGATTTAATCTTTCGCTGCCGCCTCTCTCTTCGTGTATTTGGTAAATATATCTCTAGATATGGGTTTTTCCTTTTTGGTTTTTACAGTTTAACATAATTGTGTTAATGTAACGATGGCTGAAGTAATTCGTTCTTTAAGCTTGGTCAGTGAATAATTCTTTGCAAGTCAGCATGGTGGTTGTTCTGATAAAGTTCTAAAGTTGCTTTAAAAACTGAAGCACCTTCTTTTTCATTGGATAAACCACATTAAATAGCATAAATAGCATAATGGATGTTTTGTGTAATGATGCATGGAGATTCTTGTTAGCCTTTAGTTGGAAGTTAACTATAGGGTTATAAGGATGTTTTGTGTGATTCATCATTTAACTTTCTGAATTTGACTTCGCGAGTTCTGGTGGTTTTGTGTCAGCTGCTGTTTTGATCTTATTCTTGTTGGTTCTTGAGTTGTTTGAAGCATTCGAGTTCTAAGATTTTGCTTTTACTGAAAATCAGATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA ATGCCATCTGGTGCAAATGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGCATGAAGAATATGGCCACGAGTCTTCACACTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA ATGCCATCTGGTGCAAATGACAACACCACCATCTATTCCCTCGTATCCAGGCCATCTCCAATTGTAGCATCAAACTCCCCACAGACGGCGCCAACTGCCAAAATTTGGCCAAGGGATGGGAAAGACTCACTAAACGCGTCTGCAGAAGTGGTCTCTCTCGACGCAGCTAACCACCGCGTCGAGAGAGACAGTTTTAAATCGGTCTTTGCCGACGTCATTAGTGACGGCGTCGGCAGAGACATCATCTCTCTCGACGCGTACAATGAAGGCGTCGAGAGAGAGGCTCTACCGACACCGTCACTAACGACGTCGGCAGAGACCCTGTTTAAAGCCCTAGCCCCAATCTTCTTTTCCTCCTATTCGACAAAGAGCAAAGACCCCCCCGGTCTGCGATCTTCCTCCACTGCCGTCTGCGCCCTATTCCTCCCGTCGCCTCTTCTCGCCTCCGGCCGCCTGTTTTCCCTCTATCTCCGTTGTCTGCAACATCCCGCCGGCGACCGCCTCCCGCCCTGTCAAATCGTTTCCCGTGATTTCACCGTCTCCGCTCTCTCTGTTTTTCTACAGCTTGCTGAGCGGCAAAAATCTTCGTCTTCTTGCCCCCTCTCTCTCGAAGGCTCGACCAGGGAGAAGAAGAAACCTACTCCTGAAGATCCAGGCATGAAGAATATGGCCACGAGTCTTCACACTCTTGATGAGTTACAAGTGAACTACAATAACAAGTGTTCAAGGGATTTCACAAATCCTAACCTGCCTTCTGAACCAAAAGGTCAGTCATCACAAATGAATAATGCTTGTGGACAAATCAGTCCAAGGCAAATCTCTGTTACTCTAGAATCAGCCTGA MPSGANDNTTIYSLVSRPSPIVASNSPQTAPTAKIWPRDGKDSLNASAEVVSLDAANHRVERDSFKSVFADVISDGVGRDIISLDAYNEGVEREALPTPSLTTSAETLFKALAPIFFSSYSTKSKDPPGLRSSSTAVCALFLPSPLLASGRLFSLYLRCLQHPAGDRLPPCQIVSRDFTVSALSVFLQLAERQKSSSSCPLSLEGSTREKKKPTPEDPGMKNMATSLHTLDELQVNYNNKCSRDFTNPNLPSEPKGQSSQMNNACGQISPRQISVTLESA Homology
BLAST of Lag0015596 vs. NCBI nr
Match: GER39951.1 (polypyrimidine tract-binding protein-like protein [Striga asiatica]) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-05 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of Lag0015596 vs. NCBI nr
Match: XP_023525438.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. NCBI nr
Match: XP_022932099.1 (polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita moschata] >KAG6607582.1 Polypyrimidine tract-binding protein-like 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. NCBI nr
Match: XP_023525437.1 (polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. NCBI nr
Match: XP_022932097.1 (polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.9e-05 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A5A7Q7E4 (Polypyrimidine tract-binding protein-like protein OS=Striga asiatica OX=4170 GN=STAS_16597 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1I765 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1I9W1 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471391 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1EVP5 (polypyrimidine tract-binding protein homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. ExPASy TrEMBL
Match: A0A6J1EW29 (polypyrimidine tract-binding protein homolog 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438417 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 ) HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.2 (polypyrimidine tract-binding protein 3 ) HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of Lag0015596 vs. TAIR 10
Match: AT1G43190.3 (polypyrimidine tract-binding protein 3 ) HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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