Lag0015514 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAATGCAAATGGTATCATCCACTTTGAAAGCCCGTAAACATATTTGGACACCAATGGAGGATGAAGTTTTGGTCCAGTGTTTGTTACAGTTAGTTCAAGTAGGTGGTTGGAAGGCTGACAACATGACCTTTAGATCGGGGTATTTGCAACAAGTATTGAAGTTGATGAAAGAGAAATTGCCAAGATGCGACATACAAGTGACCCCGACCTTGGAGTACAAAGTGACGATCCTAAAAAGGCAATATGATGCCATTGTCGAAATGATGGGTCCCACCTGCAGTGGTTTGGGTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCAGTCTTTGATGATTGGGTCAAGGTAAAAATTCGAACATGATCCACATAGAATTCAAAAATGTTATATGATTATATACGTTAATTGTGTTAACATGTTGAATATAGGTCTTATAAAAAAAAACATGTTTAATATAGGTACACTCACATGCTCGAGGGATGAGAAACAAGTCATTCCCCTACGCTTTAACGACCTAGCAATTGTGTTTGGGAAGGATAGGGCTAATGAAGGTGTTTTGACTTCAAAAGAAGTGGCTACCGATCTGGATAAGTGTGCTGCATGTGTATCCTGGGAAGGCAGCTGTAACGGACAACTTTTTTTAAAAAAAAAAAAACTAAAAAAAGGGGAGTGGGCTTAATTGCCCGGTCAAAGGGAGACTGGGGGGAAATTTTCCCCCCATATTTTCGGTCAAAGGGAGTTTAAAAAAAAAAAAATCAGATCTCTCCCTCTCCCTTCACGCTCTCTCTCCCTCCCCGATACTCTCTCTCTCTCCCTCGCACGCTCTCAGTTTTCCTCCGCCGCCGCCGCCGCAGCTCCTCCGCCGCTGCCGCCGACCTCCGCACTTGCTGTTCGCCACGCCGCCCCTGCGCATCGCCGGTATTCTCTCTCTCTCTCTATCTCTCTCTCTTTCTCTCTCTCTCATTCGGCTCTCTCTCCTTCTCCTCACCACAGCCCGCCGCTCGCCTCCCGTCGCCGTGAACTGCCGCAGCCGTTGTGTCCAGATCTGTTTGTTCTTCGTCGCTCGGATCTGATTACCGCCGTCACTGCCTTAAGACAAATAGCCACACGTCTCTTGTGCGTTCGACGATTTCAGTTAGTGGGTAAGTGAGAATTAAGGTGTTTTGGGTCTATTTAATGTTTAATCATGGATGCCCATTGAGTTTAGCTTCCGATTTCAAGGTGCCCGTGGTGTTTGGAGGCCGAATTATCGAATTTGAGCGATTTGGGACTGTTGGACAGCAAGCTGTGGTTCTGTTTGGGTAAGCTTTGGTTGTTAATTTTACCCCAAATGTAATGGGTTCTTAGTTGAATGCTTGGTTAGAGTCCATAGTTAATTAAGAGTTCATTTCCTTGTTGTAGGTTGCTTAAAAACCTTGGAGTTAAGGAATTTCTTGGAGGTTAATCAAGTTCCTTCACTAAGTAAGTAGCCCCTTTGGAATAAATTCTGTGTTTTAAAACTCATTTAAGTTGGGTATGACTTATAATAGCATGAGTTGGTTTTAATCCCTGAGTTGCCTTAGCCTGAAATGTTTATGCATTGAGATGACTGTTTGCTCCTAGCATGTATATTAAATATTTGGATTGAGGTTAAGGTGTCATGTATACGGTTGCCTTCAGGAATATGGATGTTGTGTGCTTGTGCTATGTAATGGGTGGAAAGTGTTGGACTGTTATACATTATGTGTTGTCTGGTATTGTTAGTGAACGGCGAGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGGTTGTTGGAGTTGTGAATGGTTTGTGTATGCGAGGTCTGACTCGTTATGGTTATAGGAGTGTATATTCTTATTTTCAGGTGCAAGGAAAAATTTTGGGTTCCCTCTGCGTGTGCCGTTATGCTGCCGAATTTTCAGTAGCTTCATGACGGCTTGGGAATCATATTTACCTTGAGGGAAAGGATTAGGAAAGAGAAAGGAATAGGCTAGTGCCTTAGTCGAGGGTCGTGTCAATTAAACACCTAGGACTAAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCGGGACTTGGCTTCGCAGTCTAGGTGCCATTTACTAACTGTGGAAGTAAATTCCTGACTTAAACCCATGAACGCCCCACCAGTGAAATGGTAGCTTAGAGCGCTATGCGCCCATTAGTGCCTTGAGAGATGAGACTTAGCTCCTCTGACTGGGTGCCATCTACCATCAGTAGGAGTAGAGACCTCCCAAAACTCCCACATGTGCACTATCAATGAGTTGGCAAACTTATATATATATACAGGTGTACTAATTGAACACGAGACCCGAACTGCAGATAAATGAAATGAAATGAAATGAAATGAGATTGAGATGACCTAACCCTTAGACCCTTAACTCGAATAAGATATTAAAGCTTTTATTGCTGCAAGTGTCTTGAAGTTTGGCTACTTACTGAGTATTTTCTTAAATACTCATTCTTTTCCCTTACATACAACTGCAGGTAGAGGTAAAGGTGTACAGCACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAG ATGTTAATGCAAATGGTATCATCCACTTTGAAAGCCCGTAAACATATTTGGACACCAATGGAGGATGAAGTTTTGGTCCAGTGTTTGTTACAGTTAGTTCAAGTAGGTGGTTGGAAGGCTGACAACATGACCTTTAGATCGGGGTATTTGCAACAAGTATTGAAGTTGATGAAAGAGAAATTGCCAAGATGCGACATACAAGTGACCCCGACCTTGGAGTACAAAGTGACGATCCTAAAAAGGCAATATGATGCCATTGTCGAAATGATGGGTCCCACCTGCAGTGGTTTGGGTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCAGTCTTTGATGATTGGGTCAAGGGCTAATGAAGGTGTTTTGACTTCAAAAGAAGTGGCTACCGATCTGGATAAGTGTGCTGCATGTTTTTCCTCCGCCGCCGCCGCCGCAGCTCCTCCGCCGCTGCCGCCGACCTCCGCACTTGCTGTTCGCCACGCCGCCCCTGCGCATCGCCGCCCGCCGCTCGCCTCCCGTCGCCGTGAACTGCCGCAGCCGTTGTGTCCAGATCTGTTTGTTCTTCGTCGCTCGGATCTGATTACCGCCGTCACTGCCTTAAGACAAATAGCCACACGTCTCTTGTGCGTTCGACGATTTCAGTTAGTGGCTTCCGATTTCAAGGTGCCCGTGGTGTTTGGAGGCCGAATTATCGAATTTGAGCGATTTGGGACTGTTGGACAGCAAGCTGTGGTTCTGTTTGGGAATATGGATGTTGTGTGCTTGTGCTATGTAATGGGTGGAAAGTGTTGGACTGTTATACATTATGTGTTGTCTGGTATTGTTAGTGAACGGCGAGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGGTTGTTGGAGTTGTGAATGGTTTGTGTATGCGAGGTCTGACTCGTTATGGTTATAGGAGTGTATATTCTTATTTTCAGGTAGAGGTAAAGGTGTACAGCACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAG ATGTTAATGCAAATGGTATCATCCACTTTGAAAGCCCGTAAACATATTTGGACACCAATGGAGGATGAAGTTTTGGTCCAGTGTTTGTTACAGTTAGTTCAAGTAGGTGGTTGGAAGGCTGACAACATGACCTTTAGATCGGGGTATTTGCAACAAGTATTGAAGTTGATGAAAGAGAAATTGCCAAGATGCGACATACAAGTGACCCCGACCTTGGAGTACAAAGTGACGATCCTAAAAAGGCAATATGATGCCATTGTCGAAATGATGGGTCCCACCTGCAGTGGTTTGGGTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCAGTCTTTGATGATTGGGTCAAGGGCTAATGAAGGTGTTTTGACTTCAAAAGAAGTGGCTACCGATCTGGATAAGTGTGCTGCATGTTTTTCCTCCGCCGCCGCCGCCGCAGCTCCTCCGCCGCTGCCGCCGACCTCCGCACTTGCTGTTCGCCACGCCGCCCCTGCGCATCGCCGCCCGCCGCTCGCCTCCCGTCGCCGTGAACTGCCGCAGCCGTTGTGTCCAGATCTGTTTGTTCTTCGTCGCTCGGATCTGATTACCGCCGTCACTGCCTTAAGACAAATAGCCACACGTCTCTTGTGCGTTCGACGATTTCAGTTAGTGGCTTCCGATTTCAAGGTGCCCGTGGTGTTTGGAGGCCGAATTATCGAATTTGAGCGATTTGGGACTGTTGGACAGCAAGCTGTGGTTCTGTTTGGGAATATGGATGTTGTGTGCTTGTGCTATGTAATGGGTGGAAAGTGTTGGACTGTTATACATTATGTGTTGTCTGGTATTGTTAGTGAACGGCGAGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGGTTGTTGGAGTTGTGAATGGTTTGTGTATGCGAGGTCTGACTCGTTATGGTTATAGGAGTGTATATTCTTATTTTCAGGTAGAGGTAAAGGTGTACAGCACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAG MLMQMVSSTLKARKHIWTPMEDEVLVQCLLQLVQVGGWKADNMTFRSGYLQQVLKLMKEKLPRCDIQVTPTLEYKVTILKRQYDAIVEMMGPTCSGLGGMMSESALRQRNQSLMIGSRANEGVLTSKEVATDLDKCAACFSSAAAAAAPPPLPPTSALAVRHAAPAHRRPPLASRRRELPQPLCPDLFVLRRSDLITAVTALRQIATRLLCVRRFQLVASDFKVPVVFGGRIIEFERFGTVGQQAVVLFGNMDVVCLCYVMGGKCWTVIHYVLSGIVSERRGVVFYLCLGVLLPPSFLVLEVVGVVNGLCMRGLTRYGYRSVYSYFQVEVKVYSTRDGELLSHGSPLG Homology
BLAST of Lag0015514 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-23 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Lag0015514 vs. NCBI nr
Match: KAA0041970.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK17906.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-23 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Lag0015514 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-22 Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Lag0015514 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-22 Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Lag0015514 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-22 Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = 0
BLAST of Lag0015514 vs. ExPASy TrEMBL
Match: A0A5A7TF70 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001930 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-23 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Lag0015514 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-23 Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of Lag0015514 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.7e-23 Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Lag0015514 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.7e-23 Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Lag0015514 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.7e-23 Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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