Lag0015439 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015439
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCOP9 signalosome complex subunit 7-like isoform X1
Locationchr12: 13128202 .. 13138181 (+)
RNA-Seq ExpressionLag0015439
SyntenyLag0015439
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATCAAATGGGGCCTAAGATTTTCATTTATTGATTTGTTCACTAATTTTTTGGGAGGGAGTATAAGCAATGCCCTTAAAATATCCTGGACAAGGAGTGTATCTACCCTGAAAATTTTCTTATTTGCTTTCAGGGTATAGTCAGAGGAAAGTTGGATCAGTTGCGAAGGTGCTTTGAGGTCTGTGTTTATTTTTGTAGCCCTGCTCTCTGAATGTGGGCTTTATAAATCGTCCATTGAAGTCCTTATATGAACATGCAGGTCCAATTTGCTGCAGGGAGAGATTTAAGACCTGGGCAACTTGGGAGCATGATACGAACACTATCAAATTGGTAATTTACTCGTTCAAGTTTCATGGGGTCCCAGCCCCTTTTAAGGAAAGCACTTGCACAACAAGTTTGTGTATGCAAGGAACGATCAATTGTGACCTTACCAAGTTTTAACCTAAATTGCTGAGATTCTAGTTCTTTTGCAACCTGAAGTATCAAGCGTTTTACTATTATTTGCAACTTCATTTGACATTTTTTAAATTATTTGTATTTTCATAGTTCTATGTGTGTGTATGTGTGTGTATGTGTGTGTTTTTTTTTTTAATTTATTAATTTTAAATTTTTTATTAGTTGATTTCAAACTTCTTTATTGACAATGAGTTGGTTTTATCACACCCTTCTCTTGTCTGTATTTGGCTGGGTGCACATCTATTCGAAATCTGACTGTTTCTGCGTGGATCTAGGTTGACTACGTCAGACAATTTATTGGTCTCAATTCAAGAAAAGATAAAATGGGCCGATAATATGAGTGAATCAGACAAGAAACACCGAAAGGATGTTGAAGAAAGGGTGGAAGAAGTAAAGAAGTCACTTTCCTTGAAGGTCAGTTGAAATAAGTTTTGTCTTAACTGCTGTTGGTGGTTGAATACTTTATCTTTTTATGGAAAACCAATATTTATTGAGAAAATAATATACAAGGATAGGATGGAAGAAGTAAAGAAGTCACTTTCCTTGAAGGTCAGTTGAAATATGTTTTGTCTTTATTGCTTTTGATGGTTGAACAGTTCTACCACTATTTATTGACAAAATTATTTTACAAGAATAATGCATGAGCAATTTTCTTAGAACTAAAATAAGAAAAGAAAATTACATTGGTAAAACCCAACTGGTATAGAATGAAGCGAAGGTAAGCTAATTTACTCGAAAGATTCGGTAAGTTTATGTTCTCTGCCCATCGGAATGTGTAGAAAAGCGCCCTATCAAAGTTCTCATTCATCTTATTTGTTTTTAACAATCTCAAGGGAGAGCTGAAATTTCACACTTCTAAAATGCCTTGATTCTTTTGCAATCCTAACCTCCAATAACATCCCAACAAATTAAACGTTGACTGAAAAGAAGAGAATCTGAAAAGAAGAAAAAGGTTCTTGATTACAATTGGCTCAGGTTCTCTTCTTTAGTGTTTCGAAAGCCTAATCTCCAATAGCATCCCAACAACCACTTTGGTAGCTGAAGTTCCACTCTTATTTTCTTTTTATATATATGAAAAAAGTTTTTCACTCTATTCAGATTTGGTTCTGATATTTTCAAATATTATATGTTACAGTCCCTATTTTGCATAAAAATTTGTTTTTTTTTCCTTCTTAATGTTTGGTAGTGTATTTAAGAGAATTTTTAGACAGCAGCCACATGAGCTTGTATTGTCATATAATTCACAGGAATGTTCATGGGTCAGTTAATGGAGGTCCTCTTCTTTGGTTATGGTTGCATTGTGAGGGTTTGCTTGGCGGGAATTTTAAATTAATTATTTATTTATTTTATTTTTTTATCCTTTTAACTTTTTGTGCAAAGGAGCAGTTTTTCCTTGGGAAAAGTTGATGTTTGGATTCTCGGGTGCAACTGATATTGAATGCTAGAGGAAACTGCTGGGTCGTAGCTTTGAAGTTCTATAGGGGGAAGGTCTTCTCTAATTATTTCGAAAGGCTTTGTAGCAGATAGGTCATAGGAATATAATCTTCAAGGAGACGTTAGAAGTGTTTCTACTGTGGAGTTTGAAATTCGAACCACCTTCTTGACATCCATCTCCTGTCATCTCCCTTTATTGTGCAAGTGGTCAAGGAATTCGAACTCAAAAAAGAAAAAGAAAAGGTGGTCAAGGAATTCCTTTGTTTCACCAAGGGGAAGGATGTTTGTTGGAGGAGGGTGAGGTTGAGTTCAATTTTGATATTGGGAGCATGCTAAAGGAACTCTTGTTGATTTTTTTGTAGCCCATGCTTTCAAAAGCTGGGGAGGCTGTTTTGCATAATATTTTAAAGGAAACAAGTCCATGGAACACCAAGTCTGTATACTTCTTAATTCTTATATCGATCAATCTCTGAACGTACAGTCCTCCCTACATCATCTAACTCCATGGTTAGAATCGGTCTGCTCGATCACCTATCTCTTTTTAGGATCCCAGTGTTGGTGAGTAAATTGTTGGAGAAGTTCATGAGAGATTTTCTTTTGGAAGGGTTTATGAGAGATTTTCTTTTGGAAGGGTTTATGAGAGATTTTCTTTTGGAAGGGTTTGAGGAAGGGGGTTGCATTTAGTTAGGTGGGAGGTGATGTTGAAACCCGTGGTTGAGGGGGTTTGGAAATAGGAAATTTAGGAGCCCGTAACAGTGTGCTCTTGGCTAAATAGCTTTGGTGTTTCCGTCTTGAGTCTAGTTCTCTTTGGCATAAGGTGGTTGTGAGTAGATATAGACCTTTCCCCTTTGAGTGATTGGAGGATAGGCTAGACTCTAGAGGCACTCCCGAGCCCCCTTAGAAAGGTATAGTTGAGGGTTTCTTCTTCTTCTTGTGGTTAGGGGATAAACCCCTGCTCCAATTTTTGCGGTTGTATTGTTTATCTTCTATGAGATATGAGAAATTAGTTGGTGGGCAAATGTGTTGCTTTACTCTCTGTTCTTCCTTTGCCCGTTTTAGGGTTCTGGTGTGCTTTGTCCAAAAGGGAAACGTCGGATGTTGACCTCTCATTGATTGGGGAGTTTTGTTGCAATCCCAAGAGAAGGGATGTTCGTCTTTGGAGACCTTCTCCCTCTGAAGACTTCTCGTGTAAATCCTTCTTTCTTTGTTTGGTCAATCCCTCTCCTTTGAATGGTGTCTTTGCCTTGTGGAAAGTGAAAATCTCAAAGAACGTTGAGTTTTTTGTTTGACTAGTTTTCCATGGAAGGGTTAACCCCTTGGATGGGGTCTCATCCTCTCAAGGAAGTAGGTCATGTTGATTGAACCACTTTGTTGCCTTCCTTGTAGAAGGGTTGTTGAAGACCTTGATCATTGTGAGGATACTAGTATGGTATATATGGGGAAATAGTATTAGATTAGGAATAAGGACATATTAGTAATTGGATAAGGAGCCATGGTTATAATAGAAAAGTTAGGGGGTCTTAGAAGGGGTGAAGAATTTTAGTAGTAGTGTCCATTGTGGGACTCTTGGGAGTGAGATAGCCCTCTCGAAAGGCTATTGGTATATTATAGTTCCTTTTGATATTGCAATATATATCTAAGTGTGTTTTCAGTGTTTGGGTTTCTAACAAATTGGTATCAGATAAGGGTGAGCAAGAAAAGTCGAAAAATTGAGTCGACCGACCGAAACCAACTGAACTGACGTCGGTCGGTCGGTTTTTTAATAATCTCGGTCGGGGTCGGTTTTACATCTTGTAAAACCGACTTTTCGGTCGGTCGGCTTGCCCAAAAGAGGCAAAAACCGACACCATCGACCCGAAAAAAAAAAAAAAAAAAGTTAAATGCGCTTCTGATGACTAATTGCATACTGCTGCAGCGCATTTAATGCGCCTGTAGCAGCCGCCCTTGGGAAGACCATCAGCCGATGGTCTTCCCAAGTAAAAATTCAAATTATATATATATTTTTATATTTTTTTTTCCGAATCTCTTTCCATCTTTCTTAATTCTTTCAGACTTTAGTTTATTTTTTTTTCTTAAATCCTCCCACTTCTCTCATTTCAGGTTCTAGGTTCCATCTTCATTTCTTCTTTACACTTTGTTCTTTTTCTTTTATCCTTCTTCCTCTTTTCTTTTTTGTAATTTCTTTTTCGTTTTCTTTCTTTTTCTTCTTATTTCTTCGGTATGTTTTCATCCTTCTCCATTTCTTCTTTTTTTTATATCCTTCTTCTTCTTTCAGAATGTTCTCTTCACCATTTTTTTTTCTGTTTTTTCCTTCTTTTTTTTTTTTAAAAAAAACAATTCTTCTTCACGATCCACTTTTAAAACCCATCCCAACCGACCGACCGCTGGTGTTATCGGTCGGTCGGCGTAACCAATCCCTCCCAAACCGCAAAAACTGACAGTCGAAAATCGGCACGTCGGTGATCGGCGTCGGTTTGAGCCCAAAACCGACGCCGACCGACCGATGCTCACCCCTAGTATCAGAGCATCGGTTCTGGCCTTGGATTGGGATCGTATGCTGGGGTTAGTGTTGAAGTTACAACAATCTTTGATCGAACAAAAAGAAGAGTGGAAAGCATTTCGGCAAGGGTTGGAGGAATCACAAAAGAAACTAGATGAAATGCGAGTGGAAAGAGGAAAAAAACCAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAAAAAGAGCACAAGAAAAATCCGATTGGATAAAAAAAGATTAATCCGAAAGCAAAGCCGAAAAGTTGCAAGAAGATGTTGATCGTACGCAACAATACCTCTGAAAACGCTAGGGAAGGCCGTTTGAGGAATTACAAAAATGTTCTCGAGCACAGAATCTTTGGGCGCATACAAGAACTATCGATCAAAGGTTGGGTGGTTGGTCACGGACAACGTCGAGGTTGTAAGAAGAAGCTAGAGGGGCAATCGAAGATGAAAGAGGTCGAAGCAAAACGAGGGAGGGAGAAAACTGGAAATAGAAAATGACGAATGATGAAGGCTATCCAGAGGTTGTGCACAAGGGGGCTGGAAAGAGACTCGATACAACTGGGGTGGCAGTTTTGAGGAGAAAACAATCGATGAAGATGTCGTGGGAAGAAGTGAAGTTGTGGAGGGGGCGATGCTTCATGACGGCAAAAATCGAGAGGAGGCAAATGATCACAAGAAAATGGAGAGAATAAGATACAAAGGTTAGTTGAAATCATGGCTGGCGACAAAGATTGGTATGGTCGGAGATGAAAGCCTGGTGGAAGCACTAGTTGGAGGAAGACGAATAGGTGGCAGTGTAGGAGGGCAAGCACGAAGGAAAGAATACATGGGTAAGAGAAGCTAGCCTTAATCAAGTGGGCTAGATATTCGTGGATGAGCCGCTTGGAGAAGAATCCAGAAGAAAGGGGAGGGGTAAGTTGATTACTGGGCTTAATTCAAACCAGATATTCATGGGTGGGCAACTTGGAGAAAATTCCAGAAGCAAAGGGAGGAGTAGGTTGATTACTGGGTTGAATTCAAACCAGATATTTGTGGGTGGGCAGCTGGGAAAAGAATCCAAAAGAAAAGAGAGGGGTAGGCTGATTACTGGGCTGGATTCAAATAAAATGAGGCCCAATTGCTTCCAAAGACAAAAAAAAGAAACTATTAAGCAAGATTGGGCTTTGTGCTGGACTTTATTTTAAAGCCAAGGTCTAGCCAGCTTATCATCCTCTTCACGTGAAAAACCCTAGTCACCATTTTCCTACTTCTCTACAGCCATCTTCACGGGACAAGCTCACGAATTGCCGCCACTGGCAATGTCACAAACCGTCGTCGCTTGTCAGCGCCATCGTCGACCACCACGGTTCACCACCGTTGCCACTACACTGCAAACCGTCGCCTGCAGCACCACAAACCATCGTTTCGTTGCTCGTAGCATCACCAATGACCACCGTCGCTGCCTACAGAGTCGCTGCCAACCACTCAGCTCACCACCACCGCCACAACGGGCCGTTGGAATGTTGATCACCTAGGTTGTTGAGTTATATGTTTTAAATTTTTTTTTTTTTTAAAAAGTTGCCCGGTTTTGAGAGTATGTTTCAAGCACACCTTGCGAACAAGGTGTCTTTGAAGGGCAGGGTAATGTGAGGATACTAGTATGGTATATATATAGGGGAATAGTATTGGATTAGGGGTAAGGGCATATTAGTAATTGGTTAAGAAGTCTTGGTTATAAATGGAGAAGTTAGGGGGTCTTAGGAGTGGAGAATTTTAGTACTAGTGTCCATTGTAGGACTTTGTTAGGTATCCAAACTAAGAAAAGACACCAAACACTAATATATTATATTGCAATATCGAAACGAAGTTACAATATAAAACCGATAGCCTTTCGAGAGGGCTAACTCTCTTCCAAGTCCCACTATGAGACAATACTAAAATTCTCCACACCCTAAAGCTCCCTACTATTCCCTATTTATAACCAAAGCACTCCTATCTAATTACCACTATACCCTCACTCATCTTCCATTACTATTCCCAATATATCTCTAACTAGTACTCTCACAATACTCCACCCTTAAAAGACACCTTGTCCTCAAGTTGTGCTTATAGAACACAATCTTAAAATTGGAACTTTTTTTTTTCTCGAAATAAAAAACACATAACCCAACACCCTAAGTGGTCAATGCTCCAACAACTCAGTGTGGCAGTGATGGTGAGCTGGATGGGTCGGCAGTGACTCATCAGGCGGCGGCGGCTGAAGACACTGCAGCGACGGCGGTAGTTGGAGACGTTGTAAGTGACAATCGTTTGTAGCACTGCAAGCAGTCGCTGTTGGTGAAGTACAACGACAGTTTTCATGTGGGTAGAAACTTGCACAAATTAGGTTAGCTTTTGGGTTTAAAATAAAATGCAGCCCAGCCCAAGGTTTATGTTTTAAATCCTCTAGATTTTCTTCGATGGGCAAAGAATGAGCCTCCCTCCAGCTATTAAAAACCAGCCCATTGAAAGCCAACTGATTAAACCCAAGCCTAAGAAGCCCATTGTCCCACCCCCTTCTAAACTCATTTGATCTCACGTGATTAGGGGTTAGGGTTTAACAACTCGCCCACGTGATTCATCGACTTGTTCCCTACCAACGCACGCCGTTTCCATCGACTTTTTCCCCGCGTTTTTGTCTTCAACCCCGCTTGCCTTCACCGCCGATGATGGTCTCCTTCACGAGTCTCTTCCTAGCGGTGTCTCTTGATTCCTTCCACCATTTCTACGCAACATTTGAGTGGGTGCCTCGGGGACTGTTTCTCCGTCCAACCCAGAAAATGCCGCCGGCGATAGACTCTGTTAGACTCCATTGTTGTCCGTTCTCCATTTTTTTGTCGTCTCTTCAACCATGTCTTTGCCTCTAAGCATACAAGCAATAGTCAATCATGGCTTCTGTTGTCACTTTCTTTTTTTTTCTTTCGAGCCTTGCGATTGCTGAGTTGTCCCTCCTTCAAACTTGGCCGAAAATCTCGTTTCCCAAATCTAGCATTTGATATTCTAGAAAACTCTCTAGCCCGTTCACAGGAGGTTTTTGAGTTGTCGGTAGATTGTACATCTACCACCCTTCTTCCCACTCTGATATTGACCTCTCATCAGTTGCTTCCGTTTCTTAATTCTTTTCATTAGCTTCTCATTCCTTTCAATTTTGTTCTTCTTCCTTTTACGAACGCCATATTTTTCGATACCTCCTTCATCTTTCTTTCTCACTTCCGACCACTTCTTACCTTTTCTACTTGACTTCTTTTTGACTTTGCTCCTCCTTCGAGAATTCCTATGCTCCATACTTTTTCGCTTATGTTCTCTCTGTTTCTCTTCTTTTTGCTTTTTTCTCTCTTCATCCTTGGCGATTGTATTCCTCATATTGATTTTGCATTCTTTCTAAGATTTGATGCACCTTCTTGATCTCTTGTTGCATTTCCTTGATCCCTTGTTGCATTGTTTTCCAATGTAGTTCCATTCTACGAGCCACCTCCATTGTGATCATGTTTGTTCCAAGACGAACGTGCTCTGATACCAATTTGTTAGGTATCCAAACTAAGAAAAGACACCAAACACTGATATATTATATTGCAATATCGAAATGAAGTTACAATATAAACCGATAGCCTTTCAAGAGGGCTAACTCTCTCCCAAGTCCCACTACGAGACAATACCAAAATTCTCCACACCCTAAAGCTCCCTACTATTCCCTATTTATAACCAAAACACTCCTATCTAATTACCACTATACCCTCACTCATCTTTTGGGAGAGAGATAGTCCTCTCAAAAGGCTTTTGATATATTGTAGTTCTTTTTGATGTTGCAATATATTATCTAAGTGTATTTTTAGTGTTCGGGTTCCTAACAATCATATCCTCTAGAATTGTGGTTTCTCCTAGACCGTACAGAATTAACTTTTTGAGGAGTTTGGCTTCAACCTTGCTAGACTTGGTGGTTGCAAAGAAATGATGGTGGAGTTTCTTCCTCACCCTCCTTTTCATGAGAAAGAAAGTAGGGGGTGTGATATTCATGGGAGTCTTTGGGTGGGGGAGAGGAATAACAATCTTTAGTGGACTTGAGAGTTTGCAAGAGATGTGGGGACACTTGTTAGATTTAATGTGTCTTTGTGGGTTTGATGGCTAAACCATTTTGTAATTATCCATAAGGTCTTATTTTGCCGTATTGGTGGTCTTTCCTATAGGTTACCTTTAGCTTTTGTGGGGTATATATATATATATTTTATGCCCTGGTACTATTTCATTCCCTTTATTTGTAACCAATTCCTGGTCTATTCACTAATATACCCCTTAATTCCCCCAATAATATTCTTAACTAACCGAATTGCTTTCCTTTCACTCTTCATGAGTCAATGTTGGGCTTAAGCGGGAGAGCTTCTAGATTATGGGCAAGTTATCCTCGATTAAGTTGATTTTAGAAGATTGGAATCCTAATGTTTCGGCAAGAGTTATGAAATGAAGCATCCAGTATTTGGGACTATGGTTTGTAACGAAGGCTAAACAATGCTTGATTCCCGAGGCTTTTTCCTCCGCCCTCAGAAAAAAGCAATGATTATAAACCTTCACACGCACTTCTTTTCTTGTTTTCACCCTCTACCATCATTTTTCTGCGGAATATATTGTTTTGGATTATGAAAGTAACAAGCAGATTTTTAATTTCAAATCCCAACTGACCTGAGTTTTCTTATTTTGATGTTCATTTTAGAGACAAAATAGTTATCAAATAATGTTCATATATTTTCTTATTGTGATTTTATTCATTATACATTGAAGTGTCAAGTGGTGGTTCACTGGTTATCATTGGCGTAATCTAGTGCACCTACAAAGATCTGAAGCTTTCTTGATAGAGAAGAACGAAATTCGTTTTGGTTTTTTAGTTCAATGGAAAAAATGCCATTGCTTTTGTACAAACAAGTCCTATTTTCAAGACGTAATTAATATTAACATCAACACCATATCCTATAACCTCTGAATCATCAGTGGCTAAAATATTGAAATAAAATATAAAACCAGTGACTTTTTACTCGAATACTGGGATATATTGGTCGATGTGTCTTACTTACATTGTGGCAGAAGTTACAAACTGTAAGCAGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGTCGACCAAAGAGGTAATATTTCACCTTCTTATGCTGCATCTAAGAAATGTTAAAATGTTTAAAACCATTAGGTTGAACTATAAGTTTAATCCTTGAGCTGTATCTATTTAGTAGGTGCATGGATTTTGAGGGCCTGTCTTTTTGGTTCCTACAAGGATATACGTGTTAAACTAACCTAACCGCGTTAACATAAGGAGTCTATTAGATATAAAATTGAAAGTTCAATGTCTTTTTAGAAACCTTTTAGAACATAGGGACTGAATAGACACAACTTCTAGAACTGCATTTATAAATGGCTTTTTGAATATACGGTAGAGTAGTAGAGTTCTAATTTTTTCCGAAATTGTACGTACAGGAGACGACATCCAATTTCTTAG

mRNA sequence

ATGGGTATAGTCAGAGGAAAGTTGGATCAGTTGCGAAGGTGCTTTGAGGTCCAATTTGCTGCAGGGAGAGATTTAAGACCTGGGCAACTTGGGAGCATGATACGAACACTATCAAATTGGTTGACTACGTCAGACAATTTATTGGTCTCAATTCAAGAAAAGATAAAATGGGCCGATAATATGAGTGAATCAGACAAGAAACACCGAAAGGATGTTGAAGAAAGGGTGGAAGAAGTAAAGAAGTCACTTTCCTTGAAGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGTCGACCAAAGAGGAGACGACATCCAATTTCTTAG

Coding sequence (CDS)

ATGGGTATAGTCAGAGGAAAGTTGGATCAGTTGCGAAGGTGCTTTGAGGTCCAATTTGCTGCAGGGAGAGATTTAAGACCTGGGCAACTTGGGAGCATGATACGAACACTATCAAATTGGTTGACTACGTCAGACAATTTATTGGTCTCAATTCAAGAAAAGATAAAATGGGCCGATAATATGAGTGAATCAGACAAGAAACACCGAAAGGATGTTGAAGAAAGGGTGGAAGAAGTAAAGAAGTCACTTTCCTTGAAGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGTCGACCAAAGAGGAGACGACATCCAATTTCTTAG

Protein sequence

MGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMSESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPIS
Homology
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BLAST of Lag0015439 vs. NCBI nr
Match: XP_022157038.1 (COP9 signalosome complex subunit 7 isoform X5 [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0 

Query: 2   GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 61
           GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMI+TLSNWLTTSDNLLVSIQEKIKWADNM
Sbjct: 139 GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLVSIQEKIKWADNM 198

Query: 62  SESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 121
           SE DKKHRKDVE+RVEEVKKSLSLKADIDFRGHEE+YSEPGGVMDYEEDRSRPKRRRHPI
Sbjct: 199 SELDKKHRKDVEDRVEEVKKSLSLKADIDFRGHEEVYSEPGGVMDYEEDRSRPKRRRHPI 258

Query: 122 S 123
           S
Sbjct: 259 S 259

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BLAST of Lag0015439 vs. NCBI nr
Match: XP_021614894.1 (COP9 signalosome complex subunit 7-like isoform X1 [Manihot esculenta] >OAY62513.1 hypothetical protein MANES_01G272900v8 [Manihot esculenta])

HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = 0 

Query: 2   GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 61
           GIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+M++TLSNWL TS+NLLVSIQEKIKWAD M
Sbjct: 139 GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWLATSENLLVSIQEKIKWADTM 198

Query: 62  SESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 121
           SESDKKHRKDVE+RVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI
Sbjct: 199 SESDKKHRKDVEDRVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258

Query: 122 S 123
           S
Sbjct: 259 S 259

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BLAST of Lag0015439 vs. NCBI nr
Match: XP_038907172.1 (COP9 signalosome complex subunit 7 isoform X2 [Benincasa hispida])

HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 2   GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 61
           GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM
Sbjct: 139 GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 198

Query: 62  SESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 121
           SE DKKHRKDVE+RVEEVKKSLSLKA+ID R HEEIYSEPGGVMDYEEDRSRPKRRRHPI
Sbjct: 199 SELDKKHRKDVEDRVEEVKKSLSLKANIDIREHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258

Query: 122 S 123
           S
Sbjct: 259 S 259

[Close]
BLAST of Lag0015439 vs. NCBI nr
Match: XP_034905624.1 (COP9 signalosome complex subunit 7-like isoform X1 [Populus alba] >TKR75164.1 COP9 signalosome complex subunit 7-like isoform X1 [Populus alba])

HSP 1 Score: 230.3 bits (586), Expect = 8.7e-57
Identity = 113/122 (92.62%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 60
           +GIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+M++TLSNWL TSDNLLVSIQEKIKWAD+
Sbjct: 138 VGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWLATSDNLLVSIQEKIKWADS 197

Query: 61  MSESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHP 120
           MSE DKKHRKDVE+RVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHP
Sbjct: 198 MSELDKKHRKDVEDRVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHP 257

Query: 121 IS 123
           +S
Sbjct: 258 MS 259

[Close]
BLAST of Lag0015439 vs. NCBI nr
Match: XP_031277484.1 (COP9 signalosome complex subunit 7 isoform X2 [Pistacia vera])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 113/121 (93.39%), Postives = 119/121 (98.35%), Query Frame = 0 

Query: 2   GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 61
           GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMI+TLSNWL+TSDNLLVSIQEKIKWAD M
Sbjct: 139 GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLSTSDNLLVSIQEKIKWADTM 198

Query: 62  SESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 121
           +ESDKKHRKDVE+RVEEVKKSLS KAD+DFRGHEEIYSEPGGVMDYEEDRSRPKRRRHP+
Sbjct: 199 NESDKKHRKDVEDRVEEVKKSLSHKADVDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPM 258

Query: 122 S 123
           S
Sbjct: 259 S 259

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BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match: Q94JU3 (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=CSN7 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.2e-50
Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 0 

Query: 2   GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNM 61
           GIVRGKLDQL+RCFEV FAAGRDLRPGQLG+M+ TLSNWL TS+NLL+SIQ+KIKWADNM
Sbjct: 139 GIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISIQDKIKWADNM 198

Query: 62  SESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 121
           SE DKKHRK+ EE VEEVKKSLS+K D+D RG++E++ EP GVMDYEED  RPKRRRHP+
Sbjct: 199 SEMDKKHRKEAEEGVEEVKKSLSMKGDVDIRGNKEMFGEPSGVMDYEEDGIRPKRRRHPV 258

Query: 122 S 123
           +
Sbjct: 259 T 259

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BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match: Q55BD5 (COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=csn7 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 3   IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 62
           I++GKLDQ  +  E+ F+ GRD++P QL SMI  L+NW +TS  LL  I   I  +D + 
Sbjct: 142 IIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLITHSDKVH 201

Query: 63  ESDKKHRKDVEERVEEVK 81
              +K +++ E + E  K
Sbjct: 202 LQYRKEKEEFESKFEIAK 219

[Close]
BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match: Q2KI56 (COP9 signalosome complex subunit 7b OS=Bos taurus OX=9913 GN=COPS7B PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 29/98 (29.59%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 3   IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 62
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 140 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 199

Query: 63  ESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSE 101
           E+  + ++ VE  V  +KK+L   A    +  E+  +E
Sbjct: 200 ENHSRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAE 237

[Close]
BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match: Q9H9Q2 (COP9 signalosome complex subunit 7b OS=Homo sapiens OX=9606 GN=COPS7B PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 29/98 (29.59%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 3   IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 62
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 140 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 199

Query: 63  ESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSE 101
           E+  + ++ VE  V  +KK+L   A    +  E+  +E
Sbjct: 200 ENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAE 237

[Close]
BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match: Q8BV13 (COP9 signalosome complex subunit 7b OS=Mus musculus OX=10090 GN=Cops7b PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 29/98 (29.59%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 3   IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 62
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 140 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 199

Query: 63  ESDKKHRKDVEERVEEVKKSLSLKADIDFRGHEEIYSE 101
           E+  + ++ VE  V  +KK+L   A    +  E+  +E
Sbjct: 200 ENHHRTQQQVEAEVSNIKKTLKATASSSAQEMEQQLAE 237

The following BLAST results are available for this feature:
BLAST of Lag0015439 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157038.11.2e-5896.69COP9 signalosome complex subunit 7 isoform X5 [Momordica charantia][more]
XP_021614894.13.9e-5794.21COP9 signalosome complex subunit 7-like isoform X1 [Manihot esculenta] >OAY62513... [more]
XP_038907172.15.1e-5795.87COP9 signalosome complex subunit 7 isoform X2 [Benincasa hispida][more]
XP_034905624.18.7e-5792.62COP9 signalosome complex subunit 7-like isoform X1 [Populus alba] >TKR75164.1 CO... [more]
XP_031277484.11.1e-5693.39COP9 signalosome complex subunit 7 isoform X2 [Pistacia vera][more]
BLAST of Lag0015439 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94JU32.2e-5077.69COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=CSN7 PE=1 ... [more]
Q55BD51.6e-0839.74COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=csn7 ... [more]
Q2KI566.0e-0829.59COP9 signalosome complex subunit 7b OS=Bos taurus OX=9913 GN=COPS7B PE=2 SV=1[more]
Q9H9Q26.0e-0829.59COP9 signalosome complex subunit 7b OS=Homo sapiens OX=9606 GN=COPS7B PE=1 SV=1[more]
Q8BV136.0e-0829.59COP9 signalosome complex subunit 7b OS=Mus musculus OX=10090 GN=Cops7b PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041481COP9 signalosome complex subunit 7, helix IPFAMPF18392CSN7a_helixIcoord: 30..76
e-value: 1.1E-6
score: 28.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..122
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 2..116
NoneNo IPR availablePANTHERPTHR15350:SF5COP9 SIGNALOSOME COMPLEX SUBUNIT 7coord: 2..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015439.1Lag0015439.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010387 COP9 signalosome assembly
biological_process GO:0000338 protein deneddylation
cellular_component GO:0008180 COP9 signalosome