Lag0015399 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCTTTGTTTGCAAAGGTAAGAGAGTTTGAACTCAGATTTCTTCTCATGTCAACAAAGTTTACATCAAGTAGGTAAGGTTAAAATTATGGGTGGGTACTTAACTGGGGACGTGATAACAAGATGGGGTTTAGATTCCTGAAACAATTTTATAATCAACCTAACTTTTCTGTGTTTGTGTTGCTTAGAAAGAACTGTTCTATTTTCTAGTAGTGTAAACATGTTTACGTAGCTGTGTTTGTTTCCTTATCAAGCAACAAGTTTGTTATGTAAAAAAATAGTTTTGAAGACTATATATCAAATGTTTTTTTTAAATGAATCCTTGGATTTACAATTTGGACAGCCTTGTGGGTCAACCCTTTTCTTTAGTGTGTGACAACCTGTGACTCTTTGTTTGTTTAAATATTGTCAATGGAGCCCAATTGCAATGTTGAATATTTGTACCCTTTACTGTTTTTACCCAACTATGATTCTGAAGTTTAACCAAATGATTTCACATTTGCAGGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCGTAGGTCGAACTTGCCAGCGAACAATACAACCACATTGCTCGATGTTTTATGGTTTTTTCTGAGTTTTTTGCTAACTCAAATTCCAGCGAACAATCAAATTCCAACAATCGTCGGCTAGTCCTCCTTCCAACCATCACGCGAGGTTTTATGGTTTTTTCTGAGTTTTTTGCCAACTCCTATTTCGATCCCTCTTGCCTTAGTTTTTTGCCTCTCAGTCTTCCTGCAAGTATTTATTTCTAATTTTTATTTTGGAAAAACAGATTATCAAATTTAAGTTGTGTTTTAGTTGAAGCAATTTGATTATAACATAGTGATTTGGTTTCTACGTGAGAGATTATAACATAGTGACATTTTTTTTCGACTTCTTAGTGGAGAATGTTTCAAGATTTGGCTTGTTGCGCACTGTTTATTGATAGCTCTATTGTAATAAACCAAGTACCTTTTTTTTCTTGATTTTATTTGTTTTTGGGGTGGGCTTTGTGAGAGCTTAAAAAATCAAGCATGATAGAATGCTTTATGATGACTCATAGCTATTGTTTTTTATGTTCCACCCTACATACTCTCTTATTCCCTCTAATTAGTTTCAAGCTTTGTGATTTGAGGCTATTTGATTATCACTAAGCTTTTGGAATTGTCTAAGTAACTTTCAAAATTAGCAAGAAATAAAGAATGGAATGGTTGAAGGAAAAAGTCGTGCTTGAAAGAATTGGGTAAGACCCAAGTCTTATTCTAAATGGAAGATAAATACAGTTCAAATATAATCGATATTTTTTTTATAATGAACACTTCTTAATTATTAATTTGCTTCAAAATAGATTTAGATGAGTTATATGTATTATTAGCTTCTTTAACTTGAATAATGATTTGTAGTCATACTTTACAAAGATTTTTATTGAGTCTTGAAAAGGTAAACAACAGGTTGCTTCGTATGTAGTATCATCTTACATTGAAAGCCACTAATGGTGGTAATAAGAAGGTTTATGAAGCCAAAGTCCGTTTGAAGCCTTTGATGAACTTCAAAGAGTTGTAGGAATTCAAACCATCTCCATGTGGATCTTTAGGTACTATTATGCTTTTTGTGTTGAAAGTTAGGTACTGTTCTGCTTCTTGTGTTTAAAGTTGGTATGGAATCATTTTGATTGATATTGCTTCTATATTTTGTATATATGTCGGATCTTATTAGTCAATTTAGGTGCTTGCTTGCAATTTAATAGTTGAACCTATGTAAACGTCAATAGTGATTTCTTTCATTTTGTCTCTAATTAAAGATGATTTAGAGATAAATGAAATGGTAGTCGTGATGTTGTCTAAAAAATTGAACAAAGATTAAGGGTGTGAGACTAGTTGATCCTTAACATGTACATGCCAACAAATTGTTTTAGAGAACAAAGGGTCAAATACATGATTTTGGCTAGGAAAATGAAGTGAGCTTTGTTTATGGTCAACAAATACATGAAAATGGTCAAAGAATTTGTTAATCTCTAAATAATGCAGGTCGTTTCCCTACTATATTTCAACTATATGTTGGTAACTCAAATAAATGTCCACTAGAGTACATTTACTTTGAGAATGGGAATACCCTTTCCGAAACATCATGAACGCATGCCAAAATGTTTCTTTTGACAAGCCAGAAGAATCCATCTGAAGTGTAATTTATTGTTCCTTGGTAAAGAGATATACTATGTGTTGTTAGACACACGTGTTGTTAGCATGTTATGTTACTCTGCTATCCATGCATAGATTCAAGAAGCCTCATGATAGCCTCATTCCAATAGTCTCTTGTAATGTAATGTGAGGTGTGTTTACTGATCATGATGTTTTTTTTCGCTTTCATTTAGTAGCTTATGACGACAATATAGATGAGGGTAGCAATCTTTTTGGTGTTTTATAATGTTTACCTTTGTTTAATGCTTTTAGAATTTTGCATATGAACTAATTATGATGTGAGATGAATGCTTTGATTTTGGCAATATACGCAAACCTGTGATAATATATAGTTTATTTCCGGGTAACCTTTGTATAGTATTAGATGAATCAGCAAGTTGGCATTTTTGTGGCAGTGCTATTTGCCTGCATGGTTTTTTTGTTGGATTAGTAAGTTGCCATTTTTGTTAGCAGTGTTATTTGACCTGGGTTTTTTGTTGCCTTATCTATTGTTTCAGTAAATTTGAAGCATTATAGTTTTCTAGAGCCTAAGAGCCAAGCAAAAGAAATAAGGTTTTTTGGATTGTTGTGTGATGCACACCATAGACAAATAAAAATTTTATATATGAAAAAATATAGTAGTTTCAAATATTATTTTAGTCCATGTACTTTCGTGATTATTTTTCTTTATTCTTTAAACCTTTAAGGGTTCTATTATAGTTCTTGATCTTTGTGCAAGTACCATGAGAGAGTTGTATGTTGTTACTTCTAGTATTACTATGAGAGAGTTTTTTGTTGTTACTTCTAGTATTACTATTGAATGTTAGTTATTATTTTTCTCACTTTTGATTGGTTTTACTATCTAAAAATAGTGCAGGATATGATAATGCTAATGCTAGAGTTTTGGACTAAGAAGATCGATTCCATTTAGGAAAATGATATATAGTTGCTATTAGCACTCTGCCAGCTAACGTAAGGGTTGTATATCTAAAGATCAATTGGCAAATAATTTGCCTATATTTTTTAAGCTTTTAAGTCATTTTCATTATTATTTGGTTCAATTAAGCCTTTAATATGGCTTGTGTCAGCTAGGTTGAATTGGAGGATCTAGTTGAGAACATTGGTGCGAAGCTAGTCAGACAAAATGCTACAAAAACCAATGACTTGGCTAAGTAATGGAACTACACAATTTCATTTATTTTGGCTCAGGGTCTTATTATTGAAGGCATCAAGGTATTATTATGTTTATGCATCCCTACCTAGAATTTTACTAACTAATTTGAACATATTTTAGGTAGTATCACCTGGAGCAGACTCTGTCCTTATCACAAGAGGCATTGAAAAAACAGCCAAAGCTAGCATTGGTCTCTGAACTTGAAAAAAATGCCAAAAGAGGTAAAATTTTATGGTTTAACGATTTTGTCATTTGATGGTTGTGTGAACTGTTTCTTCATAGGCCATTGTATTTTGTGAATGTTTAGATCATTTTCTTGCTTCCCGTTGTGCATAGTTTAATAAATTGAGATTGATAGAACATGGATAGTTAAAGAATCTATTCTGGTTGTGTTTAAATTGTATTTGATCCGAGGTCTGACTCCCTTTGTTTTGTAGAAGTTGGGAGTCTGTTTGTTGACCTGAAGTTTTGTAGAAGTTTGGAATTGTTGTTGGTTTGGATTGCCTCTTTCTGTGTGAAGTTCAAGTTCTCTATGGCTCTCTTACTTCTCATGCTTGTGAAAATCTTGGTATTACAGTTCTACTCTAGAGTTAATTGGTTTGCTCTCTGAATTCAATGAAGCAGTGGATCAACTTGAGAGCAAAGTTAATCCAATTTTAAACAAGGTATGCTTTTGTCAAGTTTCCCCTATAATCGAGCATCGTTCATCCTTAATAAAAGGAATCATTTTATTTAGAATTGTGGATAGAAAGGTAGGCAAGTTTGAAGTTAAAGTTGGATTCTTAAATATTTCCTATGTATTTGGTGAGTTCTCTTATACTTATGTTTAGTTAATTAGCTATATGGTTTTCATTTTTCTTTGGCTGTTATTTTATTTCATAACTCTAAGAGAAACATATCCTACTTGATTCTGATGGTTGTAACGAGTAATCAAATTATGACAAGATTCTTTCACCATTTGGAACATAGCACAAGTTTTTTTTTTTTTTTTTTGAGGGGGTGAGATATTGTTCAGTTTACTCTCTCTTGGCATAGATTGGTGTCAAATAGAATCTTGTGCAAGCTATGAACTTTAGCTTCCATCAGGTATAAAATTTATGAAAACAAATCTTGTTTGTTTTTTTTTAACACACTACAACAAATATCCCTTTTTATAGCTTTTCAAGGTAGCCATGATTTGGAAGCTGCAACTACAACCTTGTTGCTAAGTTGAATCTCCTACATTTGACTTGAAATGATAGTCCTAATTAGTCACCTTTCAGTTTTTGTGTTTCAAATTAGTACCACTCTGTTTCATATGATTGCTAAATTACCATGGTGATTTTGATATTGTGGGATGTTAACCTTGAGAATGACTCTAATTTAACTTTACACTATTTCCTTTTGTTTTATGGAAAATGAGAAACTAAAGTGTTAGCTTTGTGACTTTCTTCCCGATTTATTGTGTTTTTAGTGGTAGTTTAGTTTATAACATGATAGTTTTTCTTAAAAGAAGTAAAGTTTATAGTATCGTGGTTTGTACTAACCCACCACTAAATTTTGCAGGTGATGGAGATTACTATGAATTGGGTGACGTTGAGGAGGAGGTCTGAGGAGGAATAA ATGAATTCTTTGTTTGCAAAGGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCCGAACAATCAAATTCCAACAATCGTCGGCTAGTCCTCCTTCCAACCATCACGCGAGATTCAAGAAGCCTCATGATAGCCTCATTCCAATAGTCTCTTGTAATGTTGAATTGGAGGATCTAGTTGAGAACATTGGTGCGAAGCTAGTCAGACAAAATGCTACAAAAACCAATGACTTGGCTAATTCTACTCTAGAGTTAATTGGTTTGCTCTCTGAATTCAATGAAGCAGTGGATCAACTTGAGAGCAAAGTTAATCCAATTTTAAACAAGGTGATGGAGATTACTATGAATTGGGTGACGTTGAGGAGGAGGTCTGAGGAGGAATAA ATGAATTCTTTGTTTGCAAAGGTACCTTGTGCAACCAAAGCTGCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCCGAACAATCAAATTCCAACAATCGTCGGCTAGTCCTCCTTCCAACCATCACGCGAGATTCAAGAAGCCTCATGATAGCCTCATTCCAATAGTCTCTTGTAATGTTGAATTGGAGGATCTAGTTGAGAACATTGGTGCGAAGCTAGTCAGACAAAATGCTACAAAAACCAATGACTTGGCTAATTCTACTCTAGAGTTAATTGGTTTGCTCTCTGAATTCAATGAAGCAGTGGATCAACTTGAGAGCAAAGTTAATCCAATTTTAAACAAGGTGATGGAGATTACTATGAATTGGGTGACGTTGAGGAGGAGGTCTGAGGAGGAATAA MNSLFAKVPCATKAARPERVPLLELRTIKFQQSSASPPSNHHARFKKPHDSLIPIVSCNVELEDLVENIGAKLVRQNATKTNDLANSTLELIGLLSEFNEAVDQLESKVNPILNKVMEITMNWVTLRRRSEEE Homology
BLAST of Lag0015399 vs. NCBI nr
Match: XP_038875489.1 (something about silencing protein 10 isoform X2 [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.3e-04 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Lag0015399 vs. NCBI nr
Match: XP_038875490.1 (something about silencing protein 10 isoform X3 [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.3e-04 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Lag0015399 vs. NCBI nr
Match: XP_038875486.1 (something about silencing protein 10 isoform X1 [Benincasa hispida] >XP_038875487.1 something about silencing protein 10 isoform X1 [Benincasa hispida] >XP_038875488.1 something about silencing protein 10 isoform X1 [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.3e-04 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Lag0015399 vs. NCBI nr
Match: XP_038875491.1 (something about silencing protein 10 isoform X4 [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.3e-04 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Lag0015399 vs. ExPASy Swiss-Prot
Match: C0Z361 (Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B3 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.9e-05 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of Lag0015399 vs. ExPASy Swiss-Prot
Match: P21240 (Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B1 PE=1 SV=3) HSP 1 Score: 48.9 bits (115), Expect = 5.1e-05 Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Lag0015399 vs. ExPASy Swiss-Prot
Match: Q9LJE4 (Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B2 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.1e-05 Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Lag0015399 vs. ExPASy Swiss-Prot
Match: P21241 (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.1e-05 Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Lag0015399 vs. ExPASy Swiss-Prot
Match: P08927 (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum OX=3888 PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 5.1e-05 Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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