Lag0015384 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015384
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr12: 11956748 .. 11958700 (-)
RNA-Seq ExpressionLag0015384
SyntenyLag0015384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGCGACGTAATTCTAAAATCTTACAGCCGTTTCCAAATCTGCCGGATTACAACGGCGGATGTTCAGCCTTCGCGCTGCTATATCAACGGGAGAGTGGAAGCACGGAAACATCACCTCTTTCGACGGTATTTTCTTCTTCCTTACTATACTGTTGTTTTCAATACTTTGTTCTGTGTCTTGGAAACATGGATTCCTCCTCTTTGGTCGATGATTGGTCGCGGTTGAGTCTCACTACGGATGAGGAGGAAATCTCGGTGGTGGCGGATCAAGAAGCGGTGGAGCGGACGGGTATCTTCCTAGGGTTCTGTCTCCTGGGTAAGTTGTTGTGTCATAGACCACTGGCGGCTGAAGTGATGCGACGAAATTTTCGTGCGGCGTGGAAGATCGACAACGGGTTGCAAGTGGATCGTTTGGGAAGAAATTTGTTTATATTCAGATTCAGTGCTGAAGCCGATCGGGTCCTCGTGTTTCGTCAAGGTCCCTGGACTTTTGAAAGATTTCTCCTGGTTCTAGTGTTCCCAATTCGTGGAATAAGACCGTCTGATCACCCATTTTCATCTGTGTGTTTTTGGATCCATGTGTTCGAGTTACCTTTGGATTGGTTCAATCGAATTATGGCAGAACGTCTGGGAAATGCTTTGGGAATATTTCAAGACGTTGACAGTCGAAATAACTTCCTATTCTGGGGAGCAAGCCTGCGAATCAAGGTAAGAATCGATCTAAATCGGTCGGTCCGTCGCGGGATTCGAATTTACCCGGATGGCCCTCTCAGTGGTCTCTGGGTGCCGATAAGATACGAACGACTGCCGGAGCTCTGTTCTCATTGTGGGATAATTGGCCATTTATCGCGGGATTGTGCTCGAGTTTTGAGGATGGAACGAGAATTTAGTGCTCCTCCACAGTATGAAGATTGGCTTCGGTTCACGGGTAAAAGTATGATTACGGCTTCTGTAGCAGTAAGAGGGGAGATGCAAGTTCGTGATCAAGAAATTTCACATAGCCAGCGACTGGCGCTTGAGGTGGAACCGGTTGCTAATCCGATTCCGTCTGTGAACGAATTACCTTCTCGTAGATCTTCGAGTATTCGAATAATTGAGGCTGTCGATGGTGTCTGCCCCCAAACTCCAAAACCCATGGCGCCGTCTCATTATTCGCTCTCTGGTGATGTTCTTTCCAAATTAAAGGGCAAGGAGAAGGTGACTGAAGTGGAGTTGGTGACCAACGGTACTGCCTCTAAATCGGGGAAGCGGCGGACGGACAATCCAGAATGGCTGCCCGAAAGTTCGAGTCGGCGACCGTTACTCGGAGCTGATCATGTGGGCCGGCAGTCGTTGGGTCTTGGAAGCGTTTCAGGAGAAATTAAAGGGCCATTATTGCAGCCGATGGGACCTCTTGTCGGTTTTGGGATTGATAGGTATAAAAAGGAATTGAAGGCTAGTAACTACCGGTTATCCAAATCATTATTATCAATTTTTAATGCTGCGGAAAATCATCCTGTTATTAATAAATCAAGCAATCTGGAAGGGGTTATTGAAGATGATGGCGTGGAAAGTGATCCGGAAATGGTGGAGGAAGTGGGCTTTGAATCTCAAAATGGTGGCACATGGGCCCACCAAAATGCTCAAGAGGGCTTGCATCCAGACATCAATGGCGAAATCCAGAGTGAGCACAATCAAGATAAGAATGACCAGATAGGAGGAGAAGTCAGTGACGCAGGCAGCTTTGTTTTTTCGTCGAAAAAACTCCCATCAAAACACAAAGGATCAATGTGGAAGAAGAGAGCCCGGGCGGGATTTGTTCCCCAAGGAGTGAATGTGGAAGCTGTGGAAGAAGCACAAAAGAGGAAGGATGGACCTTTGTTATTCTCTCCTGGGAATATTAAGTGTCCTAAGGTTGATGATGATAAACAGGCGGGGACTGCAGAGCAGCCTCGCCCAGAATCATGA

mRNA sequence

ATGATGATGCGACGTAATTCTAAAATCTTACAGCCGTTTCCAAATCTGCCGGATTACAACGGCGGATGTTCAGCCTTCGCGCTGCTATATCAACGGGAGAGTGGAAGCACGGAAACATCACCTCTTTCGACGGTATTTTCTTCTTCCTTACTATACTGTTGTTTTCAATACTTTGTTCTGTGTCTTGGAAACATGGATTCCTCCTCTTTGGTCGATGATTGGTCGCGGTTGAGTCTCACTACGGATGAGGAGGAAATCTCGGTGGTGGCGGATCAAGAAGCGGTGGAGCGGACGGGTATCTTCCTAGGGTTCTGTCTCCTGGGTAAGTTGTTGTGTCATAGACCACTGGCGGCTGAAGTGATGCGACGAAATTTTCGTGCGGCGTGGAAGATCGACAACGGGTTGCAAGTGGATCGTTTGGGAAGAAATTTGTTTATATTCAGATTCAGTGCTGAAGCCGATCGGGTCCTCGTGTTTCGTCAAGGTCCCTGGACTTTTGAAAGATTTCTCCTGGTTCTAGTGTTCCCAATTCGTGGAATAAGACCGTCTGATCACCCATTTTCATCTGTGTGTTTTTGGATCCATGTGTTCGAGTTACCTTTGGATTGGTTCAATCGAATTATGGCAGAACGTCTGGGAAATGCTTTGGGAATATTTCAAGACGTTGACAGTCGAAATAACTTCCTATTCTGGGGAGCAAGCCTGCGAATCAAGGTAAGAATCGATCTAAATCGGTCGGTCCGTCGCGGGATTCGAATTTACCCGGATGGCCCTCTCAGTGGTCTCTGGGTGCCGATAAGATACGAACGACTGCCGGAGCTCTGTTCTCATTGTGGGATAATTGGCCATTTATCGCGGGATTGTGCTCGAGTTTTGAGGATGGAACGAGAATTTAGTGCTCCTCCACAGTATGAAGATTGGCTTCGGTTCACGGGTAAAAGTATGATTACGGCTTCTGTAGCAGTAAGAGGGGAGATGCAAGTTCGTGATCAAGAAATTTCACATAGCCAGCGACTGGCGCTTGAGGTGGAACCGGTTGCTAATCCGATTCCGTCTGTGAACGAATTACCTTCTCGTAGATCTTCGAGTATTCGAATAATTGAGGCTGTCGATGGTGTCTGCCCCCAAACTCCAAAACCCATGGCGCCGTCTCATTATTCGCTCTCTGGTGATGTTCTTTCCAAATTAAAGGGCAAGGAGAAGGTGACTGAAGTGGAGTTGGTGACCAACGGTACTGCCTCTAAATCGGGGAAGCGGCGGACGGACAATCCAGAATGGCTGCCCGAAAGTTCGAGTCGGCGACCGTTACTCGGAGCTGATCATGTGGGCCGGCAGTCGTTGGGTCTTGGAAGCGTTTCAGGAGAAATTAAAGGGCCATTATTGCAGCCGATGGGACCTCTTGTCGGTTTTGGGATTGATAGGTATAAAAAGGAATTGAAGGCTAGTAACTACCGGTTATCCAAATCATTATTATCAATTTTTAATGCTGCGGAAAATCATCCTGTTATTAATAAATCAAGCAATCTGGAAGGGGTTATTGAAGATGATGGCGTGGAAAGTGATCCGGAAATGGTGGAGGAAGTGGGCTTTGAATCTCAAAATGGTGGCACATGGGCCCACCAAAATGCTCAAGAGGGCTTGCATCCAGACATCAATGGCGAAATCCAGAGTGAGCACAATCAAGATAAGAATGACCAGATAGGAGGAGAAGTCAGTGACGCAGGCAGCTTTGTTTTTTCGTCGAAAAAACTCCCATCAAAACACAAAGGATCAATGTGGAAGAAGAGAGCCCGGGCGGGATTTGTTCCCCAAGGAGTGAATGTGGAAGCTGTGGAAGAAGCACAAAAGAGGAAGGATGGACCTTTGTTATTCTCTCCTGGGAATATTAAGTGTCCTAAGGTTGATGATGATAAACAGGCGGGGACTGCAGAGCAGCCTCGCCCAGAATCATGA

Coding sequence (CDS)

ATGATGATGCGACGTAATTCTAAAATCTTACAGCCGTTTCCAAATCTGCCGGATTACAACGGCGGATGTTCAGCCTTCGCGCTGCTATATCAACGGGAGAGTGGAAGCACGGAAACATCACCTCTTTCGACGGTATTTTCTTCTTCCTTACTATACTGTTGTTTTCAATACTTTGTTCTGTGTCTTGGAAACATGGATTCCTCCTCTTTGGTCGATGATTGGTCGCGGTTGAGTCTCACTACGGATGAGGAGGAAATCTCGGTGGTGGCGGATCAAGAAGCGGTGGAGCGGACGGGTATCTTCCTAGGGTTCTGTCTCCTGGGTAAGTTGTTGTGTCATAGACCACTGGCGGCTGAAGTGATGCGACGAAATTTTCGTGCGGCGTGGAAGATCGACAACGGGTTGCAAGTGGATCGTTTGGGAAGAAATTTGTTTATATTCAGATTCAGTGCTGAAGCCGATCGGGTCCTCGTGTTTCGTCAAGGTCCCTGGACTTTTGAAAGATTTCTCCTGGTTCTAGTGTTCCCAATTCGTGGAATAAGACCGTCTGATCACCCATTTTCATCTGTGTGTTTTTGGATCCATGTGTTCGAGTTACCTTTGGATTGGTTCAATCGAATTATGGCAGAACGTCTGGGAAATGCTTTGGGAATATTTCAAGACGTTGACAGTCGAAATAACTTCCTATTCTGGGGAGCAAGCCTGCGAATCAAGGTAAGAATCGATCTAAATCGGTCGGTCCGTCGCGGGATTCGAATTTACCCGGATGGCCCTCTCAGTGGTCTCTGGGTGCCGATAAGATACGAACGACTGCCGGAGCTCTGTTCTCATTGTGGGATAATTGGCCATTTATCGCGGGATTGTGCTCGAGTTTTGAGGATGGAACGAGAATTTAGTGCTCCTCCACAGTATGAAGATTGGCTTCGGTTCACGGGTAAAAGTATGATTACGGCTTCTGTAGCAGTAAGAGGGGAGATGCAAGTTCGTGATCAAGAAATTTCACATAGCCAGCGACTGGCGCTTGAGGTGGAACCGGTTGCTAATCCGATTCCGTCTGTGAACGAATTACCTTCTCGTAGATCTTCGAGTATTCGAATAATTGAGGCTGTCGATGGTGTCTGCCCCCAAACTCCAAAACCCATGGCGCCGTCTCATTATTCGCTCTCTGGTGATGTTCTTTCCAAATTAAAGGGCAAGGAGAAGGTGACTGAAGTGGAGTTGGTGACCAACGGTACTGCCTCTAAATCGGGGAAGCGGCGGACGGACAATCCAGAATGGCTGCCCGAAAGTTCGAGTCGGCGACCGTTACTCGGAGCTGATCATGTGGGCCGGCAGTCGTTGGGTCTTGGAAGCGTTTCAGGAGAAATTAAAGGGCCATTATTGCAGCCGATGGGACCTCTTGTCGGTTTTGGGATTGATAGGTATAAAAAGGAATTGAAGGCTAGTAACTACCGGTTATCCAAATCATTATTATCAATTTTTAATGCTGCGGAAAATCATCCTGTTATTAATAAATCAAGCAATCTGGAAGGGGTTATTGAAGATGATGGCGTGGAAAGTGATCCGGAAATGGTGGAGGAAGTGGGCTTTGAATCTCAAAATGGTGGCACATGGGCCCACCAAAATGCTCAAGAGGGCTTGCATCCAGACATCAATGGCGAAATCCAGAGTGAGCACAATCAAGATAAGAATGACCAGATAGGAGGAGAAGTCAGTGACGCAGGCAGCTTTGTTTTTTCGTCGAAAAAACTCCCATCAAAACACAAAGGATCAATGTGGAAGAAGAGAGCCCGGGCGGGATTTGTTCCCCAAGGAGTGAATGTGGAAGCTGTGGAAGAAGCACAAAAGAGGAAGGATGGACCTTTGTTATTCTCTCCTGGGAATATTAAGTGTCCTAAGGTTGATGATGATAAACAGGCGGGGACTGCAGAGCAGCCTCGCCCAGAATCATGA

Protein sequence

MMMRRNSKILQPFPNLPDYNGGCSAFALLYQRESGSTETSPLSTVFSSSLLYCCFQYFVLCLGNMDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRNFRAAWKIDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSDHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQYEDWLRFTGKSMITASVAVRGEMQVRDQEISHSQRLALEVEPVANPIPSVNELPSRRSSSIRIIEAVDGVCPQTPKPMAPSHYSLSGDVLSKLKGKEKVTEVELVTNGTASKSGKRRTDNPEWLPESSSRRPLLGADHVGRQSLGLGSVSGEIKGPLLQPMGPLVGFGIDRYKKELKASNYRLSKSLLSIFNAAENHPVINKSSNLEGVIEDDGVESDPEMVEEVGFESQNGGTWAHQNAQEGLHPDINGEIQSEHNQDKNDQIGGEVSDAGSFVFSSKKLPSKHKGSMWKKRARAGFVPQGVNVEAVEEAQKRKDGPLLFSPGNIKCPKVDDDKQAGTAEQPRPES
Homology
BLAST of Lag0015384 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 8.7e-63
Identity = 120/273 (43.96%), Postives = 170/273 (62.27%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           MD  +L+ DW +  LT++E+EI++  D +AV+     L + L+GKLL  R ++A+V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 125 FRAAWKIDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSD 184
              AWK+++ L V+ +G+NLF+F F  E D   V + GPW F++ L+VL  P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 185 HPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLN 244
             F+ V FWIH+F+LP+ W N+ MA RLGNA+G F DVD       WGASLRI+V ID+ 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 245 RSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDC-ARVLRMEREFSAPPQ 304
           + +RRGI+I  DGP+ G W+PI+YERLP+ C  CG+IGH S DC AR L  + +  A  +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 305 YEDWLRFTGKSMITASVAVRGEMQVRDQEISHS 337
           Y  WLRF G S   A    +G+   R+     S
Sbjct: 241 YGPWLRFVG-SKAGAQKGRKGKSPAREDSCGSS 272

BLAST of Lag0015384 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 6.7e-55
Identity = 102/249 (40.96%), Postives = 156/249 (62.65%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           M +S+L+++W    LT++E++I+V  D  A+E TG  L   L+ KLL  R ++  V++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 125 FRAAWKID-NGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPS 184
            + AWK+D     VD +G N+F+F F+  +DR  + R GPWTF+R L+++  P+   +P 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 185 DHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDL 244
           D  F +V  W+H F+L L   N+ MA RLGNA+G+F+DV+S  N   WG+ LR++VR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 245 NRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQ 304
            + + RGI++  DGP+ G W+PI+YERLP+   HCG + H+ +DC+         S   Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDC--CVDSVSKNLQ 240

Query: 305 YEDWLRFTG 313
           Y  WLRF G
Sbjct: 241 YGPWLRFQG 247

BLAST of Lag0015384 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 1.9e-49
Identity = 97/249 (38.96%), Postives = 147/249 (59.04%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           M +  L+++W    LT++EEE ++  D  A   TG  L   L+GKL   RP+   VM+  
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 125 FRAAWKID-NGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPS 184
            R AWK++ N  +V  LG NLF+F F+   DR  +++ GPWTF+R L+++  P+  I PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 185 DHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDL 244
           +  F+ +  W+  F+LPL    R MA RLGNALG F++ D  +    WG++LR++V +D+
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 245 NRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQ 304
           ++ +RRGI++  DGP+ G W+PI+YERLP+ C HCG+     +                Q
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKKH---------------Q 234

Query: 305 YEDWLRFTG 313
           Y  WLR+ G
Sbjct: 241 YGSWLRYQG 234

BLAST of Lag0015384 vs. NCBI nr
Match: XP_028117212.1 (uncharacterized protein LOC114314884 [Camellia sinensis])

HSP 1 Score: 173.7 bits (439), Expect = 5.2e-39
Identity = 83/240 (34.58%), Postives = 132/240 (55.00%), Query Frame = 0

Query: 71  VDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRNFRAAWK 130
           ++D +   + T+EEE  VV D+  +  T    G CL+GKLL  RP   + +R    + WK
Sbjct: 5   IEDLAWRLVLTEEEEAEVVVDEVHIHSTEANAGLCLVGKLLTMRPFNMDALRSTLTSVWK 64

Query: 131 IDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSDHPFSSV 190
              G+     G NL + +F    D+  V   GPW+F++ L++L    R ++PS+  FS++
Sbjct: 65  ASKGVVFKTFGDNLVLIQFGHIVDKRRVMINGPWSFDKQLVMLKEFNRALQPSEITFSTM 124

Query: 191 CFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVRRG 250
            FW+H   LPL    R +   LGN LG F D++  +  + WG +L I++ I++++ +RRG
Sbjct: 125 EFWVHASNLPLISMTRDVGVLLGNTLGKFVDMEYGDGGIAWGRALHIRIEINIDKPLRRG 184

Query: 251 IRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCA-RVLRMEREFSAPPQYEDWLR 310
           +++   G    +W+ ++YERLP  C HCG++GH   DC  R+L          QY  WLR
Sbjct: 185 LKLALGGQ-EPVWITLQYERLPNFCFHCGLLGHSVHDCGNRLLEGAHREEVRLQYGPWLR 243

BLAST of Lag0015384 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 171.8 bits (434), Expect = 2.0e-38
Identity = 89/247 (36.03%), Postives = 137/247 (55.47%), Query Frame = 0

Query: 67  SSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLG---FCLLGKLLCHRPLAAEVMRR 126
           + SL+D    LSLT++E+ +  +      E T + +G    CL+GKLL  RP   E M+ 
Sbjct: 2   ADSLLDLTRTLSLTSEEDAVVRIGG----ESTSLMMGKSDMCLVGKLLTRRPFNVEAMKN 61

Query: 127 NFRAAWKIDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPS 186
              + W+   G+QV  +G NLF+F F    D+  V   GPWTF++ LL+L      ++PS
Sbjct: 62  TLLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPS 121

Query: 187 DHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDL 246
           D   + V FW+HV  LPL   N+ + E +GNA+G F D+D  +  + WG ++RI+V +D+
Sbjct: 122 DIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDV 181

Query: 247 NRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDC-ARVLRMEREFSAPP 306
            + +RRG+++        +WV  +YERLP  C  CG +GH  R+C  ++   +       
Sbjct: 182 RKPLRRGMKLALSS-AEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSL 241

Query: 307 QYEDWLR 310
           QY  WLR
Sbjct: 242 QYGAWLR 243

BLAST of Lag0015384 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.2e-63
Identity = 120/273 (43.96%), Postives = 170/273 (62.27%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           MD  +L+ DW +  LT++E+EI++  D +AV+     L + L+GKLL  R ++A+V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 125 FRAAWKIDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSD 184
              AWK+++ L V+ +G+NLF+F F  E D   V + GPW F++ L+VL  P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 185 HPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLN 244
             F+ V FWIH+F+LP+ W N+ MA RLGNA+G F DVD       WGASLRI+V ID+ 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 245 RSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDC-ARVLRMEREFSAPPQ 304
           + +RRGI+I  DGP+ G W+PI+YERLP+ C  CG+IGH S DC AR L  + +  A  +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 305 YEDWLRFTGKSMITASVAVRGEMQVRDQEISHS 337
           Y  WLRF G S   A    +G+   R+     S
Sbjct: 241 YGPWLRFVG-SKAGAQKGRKGKSPAREDSCGSS 272

BLAST of Lag0015384 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-55
Identity = 102/249 (40.96%), Postives = 156/249 (62.65%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           M +S+L+++W    LT++E++I+V  D  A+E TG  L   L+ KLL  R ++  V++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 125 FRAAWKID-NGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPS 184
            + AWK+D     VD +G N+F+F F+  +DR  + R GPWTF+R L+++  P+   +P 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 185 DHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDL 244
           D  F +V  W+H F+L L   N+ MA RLGNA+G+F+DV+S  N   WG+ LR++VR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 245 NRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQ 304
            + + RGI++  DGP+ G W+PI+YERLP+   HCG + H+ +DC+         S   Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDC--CVDSVSKNLQ 240

Query: 305 YEDWLRFTG 313
           Y  WLRF G
Sbjct: 241 YGPWLRFQG 247

BLAST of Lag0015384 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.1e-50
Identity = 97/249 (38.96%), Postives = 147/249 (59.04%), Query Frame = 0

Query: 65  MDSSSLVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRN 124
           M +  L+++W    LT++EEE ++  D  A   TG  L   L+GKL   RP+   VM+  
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 125 FRAAWKID-NGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPS 184
            R AWK++ N  +V  LG NLF+F F+   DR  +++ GPWTF+R L+++  P+  I PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 185 DHPFSSVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDL 244
           +  F+ +  W+  F+LPL    R MA RLGNALG F++ D  +    WG++LR++V +D+
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 245 NRSVRRGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQ 304
           ++ +RRGI++  DGP+ G W+PI+YERLP+ C HCG+     +                Q
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKKH---------------Q 234

Query: 305 YEDWLRFTG 313
           Y  WLR+ G
Sbjct: 241 YGSWLRYQG 234

BLAST of Lag0015384 vs. ExPASy TrEMBL
Match: A0A2N9GF83 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25970 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-37
Identity = 88/242 (36.36%), Postives = 129/242 (53.31%), Query Frame = 0

Query: 70  LVDDWSRLSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRNFRAAW 129
           LV+DW R SLT DE       D+EA+     F   CLLGKLL  +      ++      W
Sbjct: 5   LVEDWRRFSLTEDEAP-GFTIDEEAMGNAKAFGSHCLLGKLLISKSFNKAALKATMLRIW 64

Query: 130 KIDNGLQVDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSDH-PFS 189
            +  G+    +G NLF+F+F  E+D   VF+  PW F+  LLVL     G  P++   F+
Sbjct: 65  GVACGIVAKDMGMNLFLFQFQNESDCKRVFKGSPWLFDNNLLVL-NEFDGSCPANQISFN 124

Query: 190 SVCFWIHVFELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVR 249
           S CFW+ +  +PL +  +   ER+G A+GI + VD   + + WG  LR+++ +D+ + ++
Sbjct: 125 SCCFWVQLHGVPLFYMTKQTGERVGGAIGIVEKVDVSEDGVGWGPFLRVRISVDITKPIQ 184

Query: 250 RGIRIYPDGPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLR-MEREFSAPPQYEDW 309
           RG R+   G    +W+  +YERLP  C HCG +GH  R+C   LR      S   QY  W
Sbjct: 185 RG-RLVTFGSTGQMWIAFKYERLPWFCFHCGKLGHGERECGVKLRGGNMNTSDFKQYGVW 243

BLAST of Lag0015384 vs. ExPASy TrEMBL
Match: A0A6P6S3G2 (uncharacterized protein LOC113687293 OS=Coffea arabica OX=13443 GN=LOC113687293 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.8e-37
Identity = 86/256 (33.59%), Postives = 129/256 (50.39%), Query Frame = 0

Query: 77  LSLTTDEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRNFRAAWKIDNGLQ 136
           L L  DEEE+ ++   +A +        C+LGKL   +    E +    +  W    GL 
Sbjct: 12  LRLRDDEEEVHLLPG-DADDIDDSLSELCILGKLFTRKQFNGEALMATTKKVWNPSKGLT 71

Query: 137 VDRLGRNLFIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSDHPFSSVCFWIHV 196
              LG NLF+F+F+   D+  VF  GPW F+  LLV+   I  ++ ++    +  FW+ V
Sbjct: 72  HTSLGDNLFLFKFNDMLDKKKVFSGGPWCFDDNLLVISDYIGNVQSTNMKLDTCSFWVRV 131

Query: 197 FELPLDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVRRGIRIYPD 256
           + LPL W N   AE LGN LG+++  + R +   WG  LRI+V+I L   ++R + ++ +
Sbjct: 132 YNLPLSWMNAKTAEYLGNKLGVYEGFEQRGDLFAWGKFLRIRVKIHLESPLKRVMHLFIE 191

Query: 257 GPLSGLWVPIRYERLPELCSHCGIIGHLSRDCARVLRMEREFSAPPQYEDWLRFTGKSMI 316
           G +    V  +YERLP LC +CG IGH  RDC   L      +  PQY  WLR   +   
Sbjct: 192 GKVHK--VLFQYERLPILCFYCGRIGHGDRDCELKLDAATYDTGDPQYGGWLRAKTEKSF 251

Query: 317 TASVAVRGEMQVRDQE 333
           +     R  + + D E
Sbjct: 252 SGQQRSRPAVTISDNE 264

BLAST of Lag0015384 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-15
Identity = 52/210 (24.76%), Postives = 90/210 (42.86%), Query Frame = 0

Query: 82  DEEEISVVADQEAVERTGIFLGFCLLGKLLCHRPLAAEVMRRNFRAAWKIDNGLQVDRLG 141
           ++EE  +   +E +E        C++ K+L  + +   V+ R  R  WK    + V  L 
Sbjct: 57  EDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQ-IPISVLNRKLRELWKPSGVMTVMDLP 116

Query: 142 RNLFIFRFSAEADRVLVFRQGPW-TFERFLLVLVFPIRGIRPSDHPFSSVCFWIHVFELP 201
           R  F+ RF  E + +     GPW     +LLV  +  R   P      +   W+ +  +P
Sbjct: 117 RQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSR-FDPLRDDIVTTPVWVRLSNIP 176

Query: 202 LDWFNRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVRRGIRIYPDGPLS 261
            ++++R +   +   LG    VD        G   R+ + ++L + ++  + I  D    
Sbjct: 177 YNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYF- 236

Query: 262 GLWVPIRYERLPELCSHCGIIGHLSRDCAR 291
                + YE L ++CS CGI GHL   C R
Sbjct: 237 -----VAYEGLSKICSSCGIYGHLVHSCPR 258

BLAST of Lag0015384 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-10
Identity = 38/139 (27.34%), Postives = 62/139 (44.60%), Query Frame = 0

Query: 145 FIFRFSAEADRVLVFRQGPWTFERFLLVLVFPIRGIRPSDHPFSSVCFWIHVFELPLDWF 204
           F F F+ E     V R+GPW F  ++++L    +   P    F  + FW+ +  +P  + 
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILL----QRWEPQIPLFPFIPFWVQIRGIPFQFL 232

Query: 205 NRIMAERLGNALGIFQDVDSRNNFLFWGASLRIKVRIDLNRSVRRGIRIYPDGPLSGLWV 264
           NR + E +G ALG   D D     +      R+ +  D+   +R          ++ L +
Sbjct: 233 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTL-L 292

Query: 265 PIRYERLPELCSHCGIIGH 284
             RYERL   C  CG++ H
Sbjct: 293 RFRYERLRGFCEVCGMLTH 306

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.18.7e-6343.96uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.16.7e-5540.96uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.11.9e-4938.96uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028117212.15.2e-3934.58uncharacterized protein LOC114314884 [Camellia sinensis][more]
XP_028122006.12.0e-3836.03uncharacterized protein LOC114319195 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU554.2e-6343.96uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ13.2e-5540.96uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX309.1e-5038.96uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9GF831.0e-3736.36CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2597... [more]
A0A6P6S3G26.8e-3733.59uncharacterized protein LOC113687293 OS=Coffea arabica OX=13443 GN=LOC113687293 ... [more]
Match NameE-valueIdentityDescription
AT2G01050.13.2e-1524.76zinc ion binding;nucleic acid binding [more]
AT3G31430.11.8e-1027.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 242..288
e-value: 9.0E-8
score: 31.7
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 102..239
e-value: 8.0E-21
score: 74.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 550..569
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 75..305
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 75..305
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 275..288
score: 8.976924

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015384.1Lag0015384.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding