Lag0013917 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCTCTCGCTCTTTCGTTTCATTTTGGATTACATCGAAGCATCGAATACATTTTCTCGTGTTTAGATTTCTGATTTTGTTTGACGCTACATTGCATTTCAGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTTTCTTTCCCTTCTGTGATTTGCCCCTTAGGTTCTCTTCTGTTTTACTTCTGTAAAAACTCAACGAGGATTCTGGTTTTTCTTTCTGTATTTTAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGGTATAATTGCGTTTACCTTTTAATTACCGTTATGATTCATGAATTCCCGTTTCTGTCTTCTTTATTCATTATCTGAAATCTGTTGGTATGACTTTCTGGAATCGTTGTGATTGAATCAGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTGAGTTTTCAATCCTTCGTGTTATTTTTTAGCGAATTTTTCCAACCATTTTGTTATGGCTTATTTTTCTCTGGAACTGGTATTGATTGTTGATGGTGCTGAGATATATTGAACTTAGGCATATTAGGATTACAGCTTGTAATATGTAAGTGTGCCCGTAAAACCTTCGTGAAGTACAGAAGAGGAAGAGGGACAATTGAAGAATTTTAATTTTAGAACTATAATAAATTTGTTCCGTCAATTAGCTAATAATCATACTTTACTTTTAGGATTGATTTTGCTTCGTTATCTGACCTATATTAGGAATCAGAACATGGGTTCTAAACTTTTGTGTGCACAAAATTTATCGTGATAGACTGAAGTCATAGACCTGTCTTAAGAAGGGCTTTATACGTTCCTAACTAAGATAGGAACACTCTGTTCATTGATATAAAGGATGACTTGTGTAAGCTTGGAGAGGTAATCATCATTTTTATTGATGAATAAGAGTTCTATTTTAACTCTTGCAGACTTGTTCTTGTCCGAACTAATTTGTGATGATTTCTGATCAGTTTTATGCTTAAACTTTTGTTGGATTTAGACTAAATGGAAACATACTACTATTGAAAAAAAAATATTCCAAAGAATTGCGTATAGTGGTAGCATCTCTAATTATCCGCAAAATCATGTCCAACGTATATACTTCAGCATCTCATATATATTGAACTTGAATTGAAACCAAGAAACATTCATCCTTAGTCCTACTGTGAGTGTCTAGTATATCAGGTGTATCCCCATGCCTCATTTTCAATTTTCTGAGTAATTTTCTTTTACGAGAAAAGTTTGATGAATGCAAATGCTGGCAGGGCAACTTCTAGTTGTCTTATGTTGAAATTTAATTATAAAAACAATTTAAACTGACAAGTAATTGGGCTTTTATGATACTGAACTTCTTTTCTTCTATTTTTTGCTACAGGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG ATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG ATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS Homology
BLAST of Lag0013917 vs. NCBI nr
Match: XP_022926626.1 (60S ribosomal protein L11-1-like [Cucurbita moschata] >XP_023003612.1 60S ribosomal protein L11-1-like [Cucurbita maxima] >XP_023518618.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo] >XP_023518619.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Lag0013917 vs. NCBI nr
Match: KAG6594538.1 (60S ribosomal protein L11-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Lag0013917 vs. NCBI nr
Match: XP_004134655.1 (60S ribosomal protein L11-1 [Cucumis sativus] >XP_008439725.1 PREDICTED: 60S ribosomal protein L11-1-like [Cucumis melo] >XP_038881245.1 60S ribosomal protein L11-1-like [Benincasa hispida] >XP_038881246.1 60S ribosomal protein L11-1-like [Benincasa hispida] >KGN49316.1 hypothetical protein Csa_003237 [Cucumis sativus]) HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96 Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Lag0013917 vs. NCBI nr
Match: XP_022926136.1 (60S ribosomal protein L11-1 [Cucurbita moschata] >XP_022978768.1 60S ribosomal protein L11-1 [Cucurbita maxima] >KAG6581365.1 60S ribosomal protein L11-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 360.5 bits (924), Expect = 8.3e-96 Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Lag0013917 vs. NCBI nr
Match: KAA0052611.1 (Ribosomal protein L5 [Cucumis melo var. makuwa]) HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95 Identity = 177/181 (97.79%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96 Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96 Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 9.5e-95 Identity = 170/180 (94.44%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2) HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93 Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93 Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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