Lag0013917 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0013917
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description60S ribosomal protein L11
Locationchr1: 53720670 .. 53722488 (+)
RNA-Seq ExpressionLag0013917
SyntenyLag0013917
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCTCTCGCTCTTTCGTTTCATTTTGGATTACATCGAAGCATCGAATACATTTTCTCGTGTTTAGATTTCTGATTTTGTTTGACGCTACATTGCATTTCAGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTTTCTTTCCCTTCTGTGATTTGCCCCTTAGGTTCTCTTCTGTTTTACTTCTGTAAAAACTCAACGAGGATTCTGGTTTTTCTTTCTGTATTTTAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGGTATAATTGCGTTTACCTTTTAATTACCGTTATGATTCATGAATTCCCGTTTCTGTCTTCTTTATTCATTATCTGAAATCTGTTGGTATGACTTTCTGGAATCGTTGTGATTGAATCAGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTGAGTTTTCAATCCTTCGTGTTATTTTTTAGCGAATTTTTCCAACCATTTTGTTATGGCTTATTTTTCTCTGGAACTGGTATTGATTGTTGATGGTGCTGAGATATATTGAACTTAGGCATATTAGGATTACAGCTTGTAATATGTAAGTGTGCCCGTAAAACCTTCGTGAAGTACAGAAGAGGAAGAGGGACAATTGAAGAATTTTAATTTTAGAACTATAATAAATTTGTTCCGTCAATTAGCTAATAATCATACTTTACTTTTAGGATTGATTTTGCTTCGTTATCTGACCTATATTAGGAATCAGAACATGGGTTCTAAACTTTTGTGTGCACAAAATTTATCGTGATAGACTGAAGTCATAGACCTGTCTTAAGAAGGGCTTTATACGTTCCTAACTAAGATAGGAACACTCTGTTCATTGATATAAAGGATGACTTGTGTAAGCTTGGAGAGGTAATCATCATTTTTATTGATGAATAAGAGTTCTATTTTAACTCTTGCAGACTTGTTCTTGTCCGAACTAATTTGTGATGATTTCTGATCAGTTTTATGCTTAAACTTTTGTTGGATTTAGACTAAATGGAAACATACTACTATTGAAAAAAAAATATTCCAAAGAATTGCGTATAGTGGTAGCATCTCTAATTATCCGCAAAATCATGTCCAACGTATATACTTCAGCATCTCATATATATTGAACTTGAATTGAAACCAAGAAACATTCATCCTTAGTCCTACTGTGAGTGTCTAGTATATCAGGTGTATCCCCATGCCTCATTTTCAATTTTCTGAGTAATTTTCTTTTACGAGAAAAGTTTGATGAATGCAAATGCTGGCAGGGCAACTTCTAGTTGTCTTATGTTGAAATTTAATTATAAAAACAATTTAAACTGACAAGTAATTGGGCTTTTATGATACTGAACTTCTTTTCTTCTATTTTTTGCTACAGGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG

mRNA sequence

ATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG

Coding sequence (CDS)

ATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGCGATATCAAAGTCCAAAAGCTCGTTCTCAACATCTCTGTTGGTGAAAGTGGTGACCGTCTTACCAGAGCCTCGAAGGTGTTAGAACAACTCAGTGGCCAATCTCCAGTCTTCTCCAAGGCACGGTACACCGTTCGATCGTTTGGTATCCGGCGCAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGAGAGAAAGCAATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTACGAGCTACTGCGCCGGAACTTCAGTGATACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTTGGAATTAAGTATGACCCTTCTACGGGTATTTATGGTATGGACTTCTATATTGTTCTGGAACGCCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTTACTAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAGTCTCAAAATATATCCTAG

Protein sequence

MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS
Homology
[Close]
BLAST of Lag0013917 vs. NCBI nr
Match: XP_022926626.1 (60S ribosomal protein L11-1-like [Cucurbita moschata] >XP_023003612.1 60S ribosomal protein L11-1-like [Cucurbita maxima] >XP_023518618.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo] >XP_023518619.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]
BLAST of Lag0013917 vs. NCBI nr
Match: KAG6594538.1 (60S ribosomal protein L11-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 273 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 332

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 333 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 392

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 393 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 452

Query: 181 S 182
           S
Sbjct: 453 S 453

[Close]
BLAST of Lag0013917 vs. NCBI nr
Match: XP_004134655.1 (60S ribosomal protein L11-1 [Cucumis sativus] >XP_008439725.1 PREDICTED: 60S ribosomal protein L11-1-like [Cucumis melo] >XP_038881245.1 60S ribosomal protein L11-1-like [Benincasa hispida] >XP_038881246.1 60S ribosomal protein L11-1-like [Benincasa hispida] >KGN49316.1 hypothetical protein Csa_003237 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]
BLAST of Lag0013917 vs. NCBI nr
Match: XP_022926136.1 (60S ribosomal protein L11-1 [Cucurbita moschata] >XP_022978768.1 60S ribosomal protein L11-1 [Cucurbita maxima] >KAG6581365.1 60S ribosomal protein L11-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.5 bits (924), Expect = 8.3e-96
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRVGRRRRCKS+VGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]
BLAST of Lag0013917 vs. NCBI nr
Match: KAA0052611.1 (Ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 177/181 (97.79%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           +ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 57  LASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 116

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 117 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 176

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 177 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 236

Query: 181 S 182
           S
Sbjct: 237 S 237

[Close]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFY+VLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 9.5e-95
Identity = 170/180 (94.44%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDF++VLERPGYRVGRRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFY+VLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

[Close]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYIVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFY+VLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

The following BLAST results are available for this feature:
BLAST of Lag0013917 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926626.12.8e-9698.9060S ribosomal protein L11-1-like [Cucurbita moschata] >XP_023003612.1 60S riboso... [more]
KAG6594538.12.8e-9698.9060S ribosomal protein L11-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_004134655.16.3e-9698.3460S ribosomal protein L11-1 [Cucumis sativus] >XP_008439725.1 PREDICTED: 60S rib... [more]
XP_022926136.18.3e-9698.3460S ribosomal protein L11-1 [Cucurbita moschata] >XP_022978768.1 60S ribosomal p... [more]
KAA0052611.11.4e-9597.79Ribosomal protein L5 [Cucumis melo var. makuwa][more]
BLAST of Lag0013917 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427951.0e-9696.1360S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2[more]
P427941.0e-9696.1360S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2[more]
P462879.5e-9594.4460S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1[more]
A2YDY21.4e-9395.5160S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S... [more]
Q0DK101.4e-9395.5160S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 2..177
e-value: 2.0E-72
score: 244.5
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 8..173
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..172
e-value: 4.6E-43
score: 144.8
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..180
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 66..164
e-value: 5.2E-21
score: 74.6
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 9..62
e-value: 3.1E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR11994:SF3160S RIBOSOMAL PROTEIN L11-1coord: 1..180
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 39..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0013917.1Lag0013917.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome