Lag0013354 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCTCCGATCAGCGACCCCAGTGAGATCGACCTCGAAGCCGGCCAAGGGGAGCAAATTCAGTGTAGAATCTGTCTCGAGACCGATGGTAATTTCCCATTCCTTTCTTTTTCAATTTTTGTTAGGTTTCGATTATTTTCCGACGGTTGGTGTTCGTGGGCTTGTTCGACATTATTCTTCCGGGAAATTCATGGAAGAAGCTAATTGGTTCTGCTTTCTTTCTACTGACATTAATTAGAATGATCACCTAGTCAATGGCTGAACGCGTTGTTTTAGTTTTAGGCACGGTTCTTTGGACCCTAGAATAACAATATTCCAAGTATATGGTGTTGATTTCTTATCATCGAAGATTTCTTTCAATAATGTGAAACTTGAAGTCGAATCAGGTCCTTCGATGTGAAAAAACTTGTTAAATTGACCGTTTGTAGGGCTCTAACGGGCTCTGTTAACTATTGCAGTCCTCGCCCCTTTCCCCCACTTGGCATTCGTGCTTTAGAATTCTTTGGAGTTGACTGGTCATTTAAAGTCTTGCATAACGGTATGGCTTATGAGAGGGTGCTATCACGTATCGATCATTCTGTAGGTGCTTGATCAAGGGAGTATTTTAAGTTCACCAATGTGTGTGTTTTGCTACCTGATCAGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCGAAGTATGTTCATCGAGAATGTCTGGATCATTGGCGAGCTGTGAAGGTGCGCATGCTATCTGGACTTTGTACTTCTGTAAATTTAACTCTGGCATGCTAATGTTCTGATGTAATTTCCAATATTCTTAACTGTAGTGCAAATGCTGTCTAAATATGGTGATAGGCTTCTATTAATTAGAGTCATACCTCCGAGATGATTGTCAATTGCGTTTGCTATCAAGTGTTACTCCCTCCTTCCCCTAACTACTACCCCGTCCCCTTGTTACCTCTGATTGTTGCTGAAGAGGAAAAAGTTGGCAGACATTTTTCTTATGCCTTGCAATTTGAAATGTGATAGATTACTCTTCTCCCTTAAGGCCCCCAGCTTTAACTTGGATACCGGTGATTTCCATGTAATTTTAATTGTTGTGATATAATTTTCAAATAAAGTTGCTTGCGATACATACCTAAATTTGCATGAGTATATTTTGCTCGCCTTAATGACAAAATCCAGCCTTGTCTAGTGGGTGACTCTTAATCTGCCTTTCTTCGTTGAAGAGATTACCTTGTATTTTTTTAATTACTAGCTCCATTCTCCTTAAAGCAGCATGATTGAAATTTCGATTTTTATCACACCCATAACCTCATCATATAAAAAAGATATTATTAGTATCTACTATCTTGCATTTTTTGCCTTCTTAGATTGGTCCTATGCTCATTTAAATAAAATTCCAGGAAGGGTTTGCTTTTGCTCATTGTACCACCTGCAAGGCCCCTTATCATTTGAGAGTGCATGCTGTCGCGGATAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAAGTTTTATGTTTTCTATTCAATTTGTTACCAAATCAATTTATGTTATAGTAGTAGATTATATTTATACGTAATAATTTCTATTCCTTTTTTTATCTGCGTGCAGGTAATTGCTTCTCTGGGATATTTGATGTATTTTATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTCGATAACAAAATTAGTTTTTATTACATATGTGGTAAAATCTCAATAAGCTGATTCAAGCTTTGCATGCACAATTTTTTTATAAACTTTTTCTTTCCCTTTTCTCCTTGAAGATTGATGAGCATACATAGGTTCAGGCACTTCGTAGTTCGTCTTATTGACCTTGTTTGCCGGTCTGTTTAGAGTGCTTTTGACTTTTAAGTGCTTTCATCAAAAGGACTTTTATCACAAGTACTTTGATGACGAGTAATAATATATCATTTAATTGTTAGATTCTAACATTTTAAGTACTCTTGCTTTAGTTAGAAAGAAGTGCCTTTTAATGTTTATTTAGAAGTATTTAAAGAAATGATAAGTTACTAAAAAGGGATGTTTCTGAAATTGTAAAAAGTATGATAAAAGTGAAAAGAAATGTTGAAAGAAGTTGTCTGTAGAAAGAAGTTAAGAGAGAAAGTGTGAGCTGGAGGATATTAGAGAGACTATGTATGGAAAAAGGCTAGGGAGGTAAACTGTGTACTGTGTAGAGAGAAGTGAAATTGTTCGTGAGTAGACATAGAAACTAATGAGAGAGTCAGTGTATAGAAAGACAACTGAAAAAAATATGCTTGTTGCATAATCAAGAGATTAATTCACATGGTTGTTGAACCTCATAAGGCGGTACTAAATGGATTTGTGGCCCTCTACTGTGATCATAGTGAGAGTTATATATTATATCAACTTGAAATAAGCCTATACATCTTGTTTCATGATGTCAGGATGCAATTGTGTACTACAGAATTGAAATATATATTTCATTTCATTTTTCGCCACTAACAGTAATCTTTCAGTTTTGTTTCTACTGTCTAGGAATTAGTTTGTGTTATTTTCTATGCAGGAGCTTTATTATTTTTTGCTTTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGCTGTCACCCTGGGTATAAATCCGTTTTTCAGTTTCTTTTGGCATGATTTTCATATCTTAGCAATGCTTTCTTAGGAGTTTAGGCTCATTCGTTGAGGCATCACTGCTTTCATGCAGTGAATGTTTCTCTAACTCAACTGAATTTTCTTTAATCTGCCTAGTAATTGAAATTGCTGGATCAGAATTTAAAATATCTGAAACTTAGCCAAGCTAGGACTTCGTTCAAGCTATGTTAGATTGATTGCAAAAATCCTTGTCCAAGCTCTTTATATCTTTCCCTATCAGATTTAAATGTTGGAAATATTTTGTAAACAAGTATTTTTAGTTTATTCAACAGCCTCAGGTTATTTATGTGTTTCATGTTCAGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGCATGTGGACTGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGATTGCCATTATTATTTATAATGGCCTTGATCGTTCTTGGTTTGTTTACAGTGATTGGGATATTCTACAGTGTCTTGGTGGCCACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGTTAACAAAGGTGAGTTGATTGATCTCTTTCAAGCTGCGCTAAACTTTCAATGAAGCACTCAGCTAGGAGAGTAAATACGGCTTTTTTCTGTACCCTAGACAAGCTGTTGAAATAAACAGAACCAACTAAATTTGGGTGAGGTCTGAAGTGAAAATTTTATTTTGTTACCAAAATTAACTAATTGGTTCATCTAAAAGCACTCTAAGTGCTTTTTATCTACTCTTAGAATTTATGTTTTTAATTGGTTAAAAGTACCATTCAAAACTTTAAACCAAATCCTACCAAATTTAAAAAATATATCCTTCAGTCCTCTGAATGCATACCAAACACACACTTGGAAAATGAAGTGCATCATGGGTGAAGGTGGATGCCCTTCAGCCGGCCAAGCACATTCATTCACGAGGTCTGTCTTATTGGTCAGTGGGTAGGAAAATGTTGGGACATGACCTCCATCTTTGGGGGACAATAATGGTTCAAATTCAAATAATAGTATATTCTGATGGTGGGTTTGATTATTAATCAGCTGTGTAGTGTTTAGGACCACAAAATGTCACTTCTGAATATGTTGGTTTTTGATTTGATTAGTATCTTTAATGGGGATAGGTTTTTGCTTTCTCAGGAATATGTTGTGGAAGATGTAGATGGCGAGATGACAGGATCTGACTGGTTACCTCCACCACTTCCGGCAGAGCACGTTCAACAGCTGAAAACTCTTGGCCTTCTATGA ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCTCCGATCAGCGACCCCAGTGAGATCGACCTCGAAGCCGGCCAAGGGGAGCAAATTCAGTGTAGAATCTGTCTCGAGACCGATGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCGAAGTATGTTCATCGAGAATGTCTGGATCATTGGCGAGCTGTGAAGGAAGGGTTTGCTTTTGCTCATTGTACCACCTGCAAGGCCCCTTATCATTTGAGAGTGCATGCTGTCGCGGATAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGATGTATTTTATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTCGATAACAAAATTAGTTTTTATTACATATGTGGAGCTTTATTATTTTTTGCTTTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGCTGTCACCCTGGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGCATGTGGACTGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGATTGCCATTATTATTTATAATGGCCTTGATCGTTCTTGGTTTGTTTACAGTGATTGGGATATTCTACAGTGTCTTGGTGGCCACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGTTAACAAAGTGCATCATGGGTGAAGGTGGATGCCCTTCAGCCGGCCAAGCACATTCATTCACGAGGTTTTTGCTTTCTCAGGAATATGTTGTGGAAGATGTAGATGGCGAGATGACAGGATCTGACTGGTTACCTCCACCACTTCCGGCAGAGCACGTTCAACAGCTGAAAACTCTTGGCCTTCTATGA ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCTCCGATCAGCGACCCCAGTGAGATCGACCTCGAAGCCGGCCAAGGGGAGCAAATTCAGTGTAGAATCTGTCTCGAGACCGATGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCGAAGTATGTTCATCGAGAATGTCTGGATCATTGGCGAGCTGTGAAGGAAGGGTTTGCTTTTGCTCATTGTACCACCTGCAAGGCCCCTTATCATTTGAGAGTGCATGCTGTCGCGGATAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGATGTATTTTATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTCGATAACAAAATTAGTTTTTATTACATATGTGGAGCTTTATTATTTTTTGCTTTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGCTGTCACCCTGGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGCATGTGGACTGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGATTGCCATTATTATTTATAATGGCCTTGATCGTTCTTGGTTTGTTTACAGTGATTGGGATATTCTACAGTGTCTTGGTGGCCACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGTTAACAAAGTGCATCATGGGTGAAGGTGGATGCCCTTCAGCCGGCCAAGCACATTCATTCACGAGGTTTTTGCTTTCTCAGGAATATGTTGTGGAAGATGTAGATGGCGAGATGACAGGATCTGACTGGTTACCTCCACCACTTCCGGCAGAGCACGTTCAACAGCTGAAAACTCTTGGCCTTCTATGA MAGQPSDSSPLIPPAPISDPSEIDLEAGQGEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASLGYLMYFIDGCQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKCIMGEGGCPSAGQAHSFTRFLLSQEYVVEDVDGEMTGSDWLPPPLPAEHVQQLKTLGLL Homology
BLAST of Lag0013354 vs. NCBI nr
Match: XP_038883755.1 (uncharacterized protein LOC120074641 [Benincasa hispida]) HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184 Identity = 317/347 (91.35%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. NCBI nr
Match: XP_022950767.1 (uncharacterized protein LOC111453774 [Cucurbita moschata] >KAG6604011.1 hypothetical protein SDJN03_04620, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184 Identity = 317/347 (91.35%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. NCBI nr
Match: XP_008440650.1 (PREDICTED: uncharacterized protein LOC103485004 [Cucumis melo] >KAA0036270.1 E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucumis melo var. makuwa] >TYK12664.1 E3 ubiquitin-protein ligase MARCH8-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 654.1 bits (1686), Expect = 6.9e-184 Identity = 316/347 (91.07%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. NCBI nr
Match: XP_023543920.1 (uncharacterized protein LOC111803644 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 653.7 bits (1685), Expect = 9.1e-184 Identity = 316/347 (91.07%), Postives = 320/347 (92.22%), Query Frame = 0
BLAST of Lag0013354 vs. NCBI nr
Match: XP_004143487.1 (uncharacterized protein LOC101214008 isoform X1 [Cucumis sativus]) HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-183 Identity = 316/347 (91.07%), Postives = 320/347 (92.22%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy Swiss-Prot
Match: Q997C2 (E3 ubiquitin-protein ligase LAP OS=Myxoma virus (strain Lausanne) OX=31530 GN=LAP PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04 Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy Swiss-Prot
Match: Q6NZQ8 (E3 ubiquitin-protein ligase MARCHF1 OS=Mus musculus OX=10090 GN=Marchf1 PE=1 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 6.7e-04 Identity = 42/128 (32.81%), Postives = 54/128 (42.19%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy Swiss-Prot
Match: Q8TCQ1 (E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 GN=MARCHF1 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 8.7e-04 Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy TrEMBL
Match: A0A6J1GFR8 (uncharacterized protein LOC111453774 OS=Cucurbita moschata OX=3662 GN=LOC111453774 PE=4 SV=1) HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184 Identity = 317/347 (91.35%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy TrEMBL
Match: A0A5A7SYV4 (E3 ubiquitin-protein ligase MARCH8-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002520 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 3.4e-184 Identity = 316/347 (91.07%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy TrEMBL
Match: A0A1S3B1M8 (uncharacterized protein LOC103485004 OS=Cucumis melo OX=3656 GN=LOC103485004 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 3.4e-184 Identity = 316/347 (91.07%), Postives = 321/347 (92.51%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy TrEMBL
Match: A0A0A0KGV2 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501240 PE=4 SV=1) HSP 1 Score: 653.3 bits (1684), Expect = 5.7e-184 Identity = 316/347 (91.07%), Postives = 320/347 (92.22%), Query Frame = 0
BLAST of Lag0013354 vs. ExPASy TrEMBL
Match: A0A6J1IUA1 (uncharacterized protein LOC111478483 OS=Cucurbita maxima OX=3661 GN=LOC111478483 PE=4 SV=1) HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183 Identity = 315/347 (90.78%), Postives = 319/347 (91.93%), Query Frame = 0
BLAST of Lag0013354 vs. TAIR 10
Match: AT2G22120.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 555.1 bits (1429), Expect = 4.1e-158 Identity = 266/341 (78.01%), Postives = 289/341 (84.75%), Query Frame = 0
BLAST of Lag0013354 vs. TAIR 10
Match: AT2G22120.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 555.1 bits (1429), Expect = 4.1e-158 Identity = 266/341 (78.01%), Postives = 289/341 (84.75%), Query Frame = 0
BLAST of Lag0013354 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 191.8 bits (486), Expect = 9.1e-49 Identity = 140/380 (36.84%), Postives = 178/380 (46.84%), Query Frame = 0
BLAST of Lag0013354 vs. TAIR 10
Match: AT1G50440.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-34 Identity = 99/317 (31.23%), Postives = 136/317 (42.90%), Query Frame = 0
BLAST of Lag0013354 vs. TAIR 10
Match: AT1G50440.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-34 Identity = 99/317 (31.23%), Postives = 136/317 (42.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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