Lag0013151 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0013151
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr1: 47886913 .. 47888856 (+)
RNA-Seq ExpressionLag0013151
SyntenyLag0013151
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAACACCATCAAATTCCAAGAGAATGCTTGAAGGAGACTGAAGGTTGTGGTTATTGCTAATGTTTTCGTTTTCATGATCACTTGTTGCTGTCACTTGCTCTTTTCATTATATTTATTAAATTTTGTTTTAATTCCTTCCATTATTTTTGTCATCATGATCATGAATTTTATTGTTAAGTATCTGTTGCCACCCTACCTTTTGATGGGAGGCTTGGGATGCTTTCCCCTTCTCTTTTAATACACTGGAGCTGAAAAGTTGTGCTTTCCTGTGTAACATTTGAGCCATTTCGAAGTGTATACATAACACTAATAAGAATGTTGGAATACCTTTTGATCCATTGTTAGATTCTTTCTCACTCTTCATCACTTAGAGACTTGAAAGTAGAAACTAGCTTTGCTTAGACACACACTCTGTTGAAATCTCCTATTTTATGGCCTCTAGTCTCTCCTGGTCTCTTCCTTGTTGCCATGGAAGATGAATTAGAAGTTGTTGAAGGTGATCCTTATGAAGGTAGGCTTTAGTTACATTAGCGATCAGGAATGTTAGGTAAAAGTGAATGAAGCTGAGGAACGTCGCGTCCTACTCGTCGAGTATGACGTTATCGGCTTATATCATCCATTTGAGAGGGGGAGGAAGAAAAGGTGTATTAGCTAGCTATCTTGGTTGAAAGTTGGTGTTGTGATGCATCCTTTGGGAAATACATTATGAAAATGAAGATGTGGGATTGAGGGAGATTTGTTATAGTTGGGATATGGTGGGAGAAGTTAGCCAATGAGATTTCTGACAAGATGGTGTCAGAGGCTCCACATATCATCCTTCTTTTAGTTTTGGTTTTGTAATGGAAACACTGACAATGCTTGATGTCTATAGAGTGTACTGTTTTTCCCCATGGGAATGAAACACACAGAAAGGCACAGCCAACACAGGAGGATATTAATTATCTCCAAAAGTCAGAGACTCTAACTTCAGTGTTAAGATTCCATCAATGCCTTCTCCATCTCCACTCCTAAGTGGACTGCTTTCTCTTGTGTTTTTAACTACTCAACATTAACAAAGGGGAAGATAACATTGATTACCCTTCTTTAAAATATATTTTTCATATTAAGAAAAAAATTTTAGTGGATAGTTGTAACCAAAAAAAAAAAACTGTTTTCTTTTAATTTTTTTCCTTTATAGGTTGGGTTCAGCTCTGTTTTTGTTCTATCAGTTGTCAATCTATCATTTAAGTTAACTCATGCTTGTAATCATGTAACCTTAAATTTATTAGAAATCTATGTGTATCATATGAAACAAAGAGCTAATTTATATTTAATATCGATGAACATGGTAATGTTAAAAGTTCATTTAATTCTGAGGCTAGGAAAAATGTATATTAAAATATTCAATGAACTTATTTAACTAGATTCTTTATAATAAAAATTAGAAAAGGAGTGAATATTAAGATATCAATATTGTTTTATTATGTTTATTAACAACACAATCAACAAAGTTCAATTCTTCATTTCCCGAGCTTAGATCTTTTCTATCATTAATTGTATGTTTACCCAAAAAGAAAAAAAACGTTATTTTTATTTTTATTTTTTTAATCATTTTCGCTGACCGGTCATAATAAGCCTTTAATTAATAAACGTTTAAATACTCTTGATAATGGGCCGGGCCTAGTACAGACGTTGGGCCTGTCTTTGATCCATCACTTTAGAAAGGCGCGCGAAAAAGTTCGATTTAAATTTTGACGAGGCTAAACGTACCTGTCCGTGACGATTGGGAAGAAGAACCCGCAACCGCAGATCAGAGTTGAACAGAGATGCTCCGTCGTGGTCATCATTTCTCCGTCCTCGCCGTCAAATTCTGAAGTGCTGAGAATGAAGCTATTCTTCTCCGATGCCAGACGGAAGGGAGTAACAGTTGTAGCCTCAGTTTCCGATGGTTCTGTTTGA

mRNA sequence

ATGCAAGAACACCATCAAATTCCAAGAGAATGCTTGAAGGAGACTGAAGTCTCTCCTGGTCTCTTCCTTGTTGCCATGGAAGATGAATTAGAAGTTGTTGAAGGTGATCCTTATGAAGAGTGTACTGTTTTTCCCCATGGGAATGAAACACACAGAAAGGCACAGCCAACACAGGAGGATATTAATTATCTCCAAAAGTCAGAGACTCTAACTTCAGTTGGGTTCAGCTCTGTTTTTGTTCTATCAGTTGTCAATCTATCATTTAAGTTAACTCATGCTTGTAATCATAAGAACCCGCAACCGCAGATCAGAGTTGAACAGAGATGCTCCGTCGTGGTCATCATTTCTCCGTCCTCGCCGTCAAATTCTGAAGTGCTGAGAATGAAGCTATTCTTCTCCGATGCCAGACGGAAGGGAGTAACAGTTGTAGCCTCAGTTTCCGATGGTTCTGTTTGA

Coding sequence (CDS)

ATGCAAGAACACCATCAAATTCCAAGAGAATGCTTGAAGGAGACTGAAGTCTCTCCTGGTCTCTTCCTTGTTGCCATGGAAGATGAATTAGAAGTTGTTGAAGGTGATCCTTATGAAGAGTGTACTGTTTTTCCCCATGGGAATGAAACACACAGAAAGGCACAGCCAACACAGGAGGATATTAATTATCTCCAAAAGTCAGAGACTCTAACTTCAGTTGGGTTCAGCTCTGTTTTTGTTCTATCAGTTGTCAATCTATCATTTAAGTTAACTCATGCTTGTAATCATAAGAACCCGCAACCGCAGATCAGAGTTGAACAGAGATGCTCCGTCGTGGTCATCATTTCTCCGTCCTCGCCGTCAAATTCTGAAGTGCTGAGAATGAAGCTATTCTTCTCCGATGCCAGACGGAAGGGAGTAACAGTTGTAGCCTCAGTTTCCGATGGTTCTGTTTGA

Protein sequence

MQEHHQIPRECLKETEVSPGLFLVAMEDELEVVEGDPYEECTVFPHGNETHRKAQPTQEDINYLQKSETLTSVGFSSVFVLSVVNLSFKLTHACNHKNPQPQIRVEQRCSVVVIISPSSPSNSEVLRMKLFFSDARRKGVTVVASVSDGSV
Homology
BLAST of Lag0013151 vs. NCBI nr
Match: KAG7026939.1 (hypothetical protein SDJN02_10947, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.9 bits (141), Expect = 4.3e-05
Identity = 33/51 (64.71%), Postives = 36/51 (70.59%), Query Frame = 0

Query: 97  KNPQPQIRVEQRCSVVVIISPSSPSNSEVLRMKLFFSDARRKGVTVVASVS 148
           K  Q  IRV +RCSV+VIISPSSPSN EV RMK F S    K  TV+ASVS
Sbjct: 5   KKKQQSIRVNRRCSVMVIISPSSPSNFEVQRMKRFSSVVEWKEATVLASVS 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7026939.14.3e-0564.71hypothetical protein SDJN02_10947, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0013151.1Lag0013151.1mRNA