Lag0011966 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCATCTGATGAGGCCACGTGTCACAGAGCGGTTATCCGAAGGCTTCAATGATGACAACACATCAATTTTACCATGGGCGTTTGGATCCGCGATTTTACCGTTGATAATTTTTGAAATTCAGGTTTGCATTTTTAAATTAAAACGGTAATATTAGTTATTGCAGGGCAAATTTTTCGGTTAGGATTCTATTTTGCTGAAGCCTTATTTATTTACAACCGCTGGTAAGCTTCTTCCACTTCGTCTTCTTAATCCATTTTTCCATCTGCATTCCTTTTTTTCCTATTCTCTGTCAAAACCTTCATACCTCCATGGCTAAGACTAGAGCTAGGAAAGAAAGAGGAGTGAAGAAGAGGAGGTGCCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCCGGAAGTACAAAAAGGAAAAACTAAGAAGAAAAGAACGCCAGAAGAGAAGGAGGCAGCAAGAGGGCTGCGGAACAAGAAGTCATCCAAGAAACAGAGGCTGTTCAGAATCTTGAGACAGAACCGATAGTTTCTGCTACGGTTCAGGAAGGGAATACTGAGAAGGATCATGAGACAGAGGCCGAAAGACAAGTCGCTGGTAAGCCTGACGAGGAGAAAACACCGGAGCTGGAGGTTCAGGTTGAAGTCATTATGCCTGAACCGCCCAAGCGCCGCCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGAGCGAACAGAGAGAAAGCAAGGGCAAAGGAATTGCCGAAGCATGGGAGAGATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAATGAACTTGCCAGAGCAAAATATCAGGAAGTACTGAAGCGGGATTTCTTGTTCGAGCGAGGATTTGGCAGTGATCTGCCAGGTTTTTGGAATCTGGAATAGCAAGCCTGGGGTGGAGGCAGTTTTGTGCAAAGCCTGATCCTGTCAATGCCAACATCGTTCGGGAATTCTACACCAATCTTGATGTGAAGGATGATTTTGAAGTCATAGTACGAGGAGTGCCTGTCCAATGGAGCCAGAGGCCATCAATAATTTGTTTGATCTTCAGGACTTTCCACACGCAGTTTTCAATGAAATGGTGGTTGCCCCATCGAGCGACCAATTAAGTGCGACGGTCCGAGAGGTAGGTGTTGAGGGGGCTCAATGGAGGGTGTCGCAGATGCGGAAGCACAAATTTCAAGCTGCCTATTTAAAGAGTGAAGCCAACGCTTGGATGGGCTTCATTAGGCTCCGCTTGCTGCCGACAACGCACGACTCCACTATATCGCGGGACAGAGTGTTGCTTGCTTTTTCCATCCTTCGATCAATGAGCATAGATGTTGGAAAAATAATTGCTACTGAGATTGCTGACTGTTGGCGCAAGAAGGTGGGGAAGCTGTTCTTTCCAAACACGATTACAATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGCTTGATAAGGGAATCATTGACACACCTAATATGGCGCAGCTTCAGCATACGCAAGAGGCTCGCCAGGGTGGGCTTATGTATGGCGTTAATCAGATCCTAGAGCAACTGACAGTGTTGGCCAGTAAGTTAGAATTTGCTGAAAGGCAAGCTCAGACCTACTGGCTTGGCCCGACCCCTTCGGTCTTGACCTGTCCCACTTGCCAGTTTCGCCTCTTGGGTCCATCTCCCATCCCGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGGGTGGTCCAACCTATAA ATGCATCATCTGATGAGGCCACGTGTCACAGAGCGGTTATCCGAAGGCTTCAATGATGACAACACATCAATTTTACCATGGGCGTTTGGATCCGCGATTTTACCGTTGATAATTTTTGAAATTCAGGAAGGGAATACTGAGAAGGATCATGAGACAGAGGCCGAAAGACAAGTCGCTGGTAAGCCTGACGAGGAGAAAACACCGGAGCTGGAGGTTCAGGTTGAAGTCATTATGCCTGAACCGCCCAAGCGCCGCCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGAGCGAACAGAGAGAAAGCAAGGGCAAAGGAATTGCCGAAGCATGGGAGAGATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAATGAACTTGCCAGAGCAAAATATCAGGAATCATAGTACGAGGAGTGCCTGTCCAATGGAGCCAGAGGCCATCAATAATTTGTTTGATCTTCAGGACTTTCCACACGCAGTTTTCAATGAAATGGTGGTTGCCCCATCGAGCGACCAATTAAGTGCGACGGTCCGAGAGGTAGGTGTTGAGGGGGCTCAATGGAGGGTGTCGCAGATGCGGAAGCACAAATTTCAAGCTGCCTATTTAAAGAGTGAAGCCAACGCTTGGATGGGCTTCATTAGGCTCCGCTTGCTGCCGACAACGCACGACTCCACTATATCGCGGGACAGAGTGTTGCTTGCTTTTTCCATCCTTCGATCAATGAGCATAGATGTTGGAAAAATAATTGCTACTGAGATTGCTGACTGTTGGCGCAAGAAGGTGGGGAAGCTGTTCTTTCCAAACACGATTACAATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGCTTGATAAGGGAATCATTGACACACCTAATATGGCGCAGCTTCAGCATACGCAAGAGGCTCGCCAGGGTGGGCTTATGTATGGCGTTAATCAGATCCTAGAGCAACTGACAGTGTTGGCCAGTAAGTTAGAATTTGCTGAAAGGCAAGCTCAGACCTACTGGCTTGGCCCGACCCCTTCGGTCTTGACCTGTCCCACTTGCCAGTTTCGCCTCTTGGGTCCATCTCCCATCCCGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGGGTGGTCCAACCTATAA ATGCATCATCTGATGAGGCCACGTGTCACAGAGCGGTTATCCGAAGGCTTCAATGATGACAACACATCAATTTTACCATGGGCGTTTGGATCCGCGATTTTACCGTTGATAATTTTTGAAATTCAGGAAGGGAATACTGAGAAGGATCATGAGACAGAGGCCGAAAGACAAGTCGCTGGTAAGCCTGACGAGGAGAAAACACCGGAGCTGGAGGTTCAGGTTGAAGTCATTATGCCTGAACCGCCCAAGCGCCGCCGCATCAAGAGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAAAGGGAAGCTGAGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGCAGAAGAAGAGCGTTTGAGCGAACAGAGAGAAAGCAAGGGCAAAGGAATTGCCGAAGCATGGGAGAGATTGAGGAGCCGAGGGCACCATTCATTCGCTTCGTCAATGAACTTGCCAGAGCAAAATATCAGGAATCATAGTACGAGGAGTGCCTGTCCAATGGAGCCAGAGGCCATCAATAATTTGTTTGATCTTCAGGACTTTCCACACGCAGTTTTCAATGAAATGGTGGTTGCCCCATCGAGCGACCAATTAAGTGCGACGGTCCGAGAGGTAGGTGTTGAGGGGGCTCAATGGAGGGTGTCGCAGATGCGGAAGCACAAATTTCAAGCTGCCTATTTAAAGAGTGAAGCCAACGCTTGGATGGGCTTCATTAGGCTCCGCTTGCTGCCGACAACGCACGACTCCACTATATCGCGGGACAGAGTGTTGCTTGCTTTTTCCATCCTTCGATCAATGAGCATAGATGTTGGAAAAATAATTGCTACTGAGATTGCTGACTGTTGGCGCAAGAAGGTGGGGAAGCTGTTCTTTCCAAACACGATTACAATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATATGATCATGCTTGATAAGGGAATCATTGACACACCTAATATGGCGCAGCTTCAGCATACGCAAGAGGCTCGCCAGGGTGGGCTTATGTATGGCGTTAATCAGATCCTAGAGCAACTGACAGTGTTGGCCAGTAAGTTAGAATTTGCTGAAAGGCAAGCTCAGACCTACTGGCTTGGCCCGACCCCTTCGGTCTTGACCTGTCCCACTTGCCAGTTTCGCCTCTTGGGTCCATCTCCCATCCCGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGGGTGGTCCAACCTATAA MHHLMRPRVTERLSEGFNDDNTSILPWAFGSAILPLIIFEIQEGNTEKDHETEAERQVAGKPDEEKTPELEVQVEVIMPEPPKRRRIKRKAGRVRVIRNTPSPPTSDSEEEKREAENKEKEEEARKAEEERLSEQRESKGKGIAEAWERLRSRGHHSFASSMNLPEQNIRNHSTRSACPMEPEAINNLFDLQDFPHAVFNEMVVAPSSDQLSATVREVGVEGAQWRVSQMRKHKFQAAYLKSEANAWMGFIRLRLLPTTHDSTISRDRVLLAFSILRSMSIDVGKIIATEIADCWRKKVGKLFFPNTITMLCSRAGVPTVPEDMIMLDKGIIDTPNMAQLQHTQEARQGGLMYGVNQILEQLTVLASKLEFAERQAQTYWLGPTPSVLTCPTCQFRLLGPSPIPISPRLSSSAPCTSGWSNL Homology
BLAST of Lag0011966 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii]) HSP 1 Score: 107.5 bits (267), Expect = 2.9e-19 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of Lag0011966 vs. NCBI nr
Match: TYG37159.1 (hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]) HSP 1 Score: 103.2 bits (256), Expect = 5.6e-18 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 0
BLAST of Lag0011966 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]) HSP 1 Score: 102.8 bits (255), Expect = 7.3e-18 Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 0
BLAST of Lag0011966 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 102.8 bits (255), Expect = 7.3e-18 Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0
BLAST of Lag0011966 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-17 Identity = 62/163 (38.04%), Postives = 89/163 (54.60%), Query Frame = 0
BLAST of Lag0011966 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-19 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of Lag0011966 vs. ExPASy TrEMBL
Match: A0A5D1ZYC3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G120000v1 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 0
BLAST of Lag0011966 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18 Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 0
BLAST of Lag0011966 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18 Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0
BLAST of Lag0011966 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.0e-18 Identity = 62/163 (38.04%), Postives = 89/163 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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