Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGCTAGAGTTCTTAAATTCAATCTGTAGTGCTCGTATCCTTTCAATCCATAGTTCTGGTTTCTCATGTAAATTCTTCCTATTGTCGCCATCTTGTCTGCAAATCTGTGTTGCCTTCCTTCCAACAGCTTTCGAGGACTTGATAGAAAATTGGGAGAAATTTAACCTTACGGCTGAAGAAGAGGAAACGGAAGTGGATGTTGATCGTCAAGCTGCAGTCGTTACGGGTAGATCCTTGGGCTTTAGTCTCATTGGTAAGCTCCTTGCGCCTAGGGTCATATCTGGTGAGGTAATGAGAAAGAATTTCAAGGCTGCCTGGAACATCCCAAATGGATTGACTGTCGAAAAGCTTGGACTCAATTTGTTCCTATTTACGCTGCGAACGGAGGAGGAGCAAACCAGAGTTTTACAGCAAAAACCGTGGTTGTTTGACAAGTATATTTTGATGCTATCCAAACCAATCCCCATGGTGAAGTCCCAAGCAATGGAGTTCAAAATGGTGATTTTCTGAATACATTTTTATGAACTCCCTATGGACCTTTACAACTCCTCTATGGCAGAAAGGCTCGAAAACGCGGTGGGTACGTTTGTAGACTATGACAATGGTGGTAGGAGAATGGCTGGAAGGAGAGTCTCCGTGTACGTGTTCAATTGGATATTTCAAAGCCACTTCGACAAGGCATCAAAGTAAAGCTTGACGAACCTCTGGGTAGTTGCTGGTCCCCGATTCGGTATGAAAAGCTCCCGGAATTATGCTCCTTCTGA
mRNA sequence
ATGGATTTGCTAGAGTTCTTAAATTCAATCTGTAGTGCTCGTATCCTTTCAATCCATAGTTCTGGTTTCTCATGTAAATTCTTCCTATTGTCGCCATCTTGTCTGCAAATCTGTGTTGCCTTCCTTCCAACAGCTTTCGAGGACTTGATAGAAAATTGGGAGAAATTTAACCTTACGGCTGAAGAAGAGGAAACGGAAGTGGATGTTGATCGTCAAGCTGCAGTCGTTACGGGTAGATCCTTGGGCTTTAGTCTCATTGGTAAGCTCCTTGCGCCTAGGGTCATATCTGGTGAGGTAATGAGAAAGAATTTCAAGGCTGCCTGGAACATCCCAAATGGATTGACTGTCGAAAAGCTTGGACTCAATTTGTTCCTATTTACGCTGCGAACGGAGGAGGAGCAAACCAGAGTTTTACAGCAAAAACCGTGGTTGTTTGACAAGTATATTTTGATGCTATCCAAACCAATCCCCATGGTGAAGTCCCAAGCAATGGAGTTCAAAATGGAGAATGGCTGGAAGGAGAGTCTCCGTGTACGTGTTCAATTGGATATTTCAAAGCCACTTCGACAAGGCATCAAAGTAAAGCTTGACGAACCTCTGGGTAGTTGCTGGTCCCCGATTCGGTATGAAAAGCTCCCGGAATTATGCTCCTTCTGA
Coding sequence (CDS)
ATGGATTTGCTAGAGTTCTTAAATTCAATCTGTAGTGCTCGTATCCTTTCAATCCATAGTTCTGGTTTCTCATGTAAATTCTTCCTATTGTCGCCATCTTGTCTGCAAATCTGTGTTGCCTTCCTTCCAACAGCTTTCGAGGACTTGATAGAAAATTGGGAGAAATTTAACCTTACGGCTGAAGAAGAGGAAACGGAAGTGGATGTTGATCGTCAAGCTGCAGTCGTTACGGGTAGATCCTTGGGCTTTAGTCTCATTGGTAAGCTCCTTGCGCCTAGGGTCATATCTGGTGAGGTAATGAGAAAGAATTTCAAGGCTGCCTGGAACATCCCAAATGGATTGACTGTCGAAAAGCTTGGACTCAATTTGTTCCTATTTACGCTGCGAACGGAGGAGGAGCAAACCAGAGTTTTACAGCAAAAACCGTGGTTGTTTGACAAGTATATTTTGATGCTATCCAAACCAATCCCCATGGTGAAGTCCCAAGCAATGGAGTTCAAAATGGAGAATGGCTGGAAGGAGAGTCTCCGTGTACGTGTTCAATTGGATATTTCAAAGCCACTTCGACAAGGCATCAAAGTAAAGCTTGACGAACCTCTGGGTAGTTGCTGGTCCCCGATTCGGTATGAAAAGCTCCCGGAATTATGCTCCTTCTGA
Protein sequence
MDLLEFLNSICSARILSIHSSGFSCKFFLLSPSCLQICVAFLPTAFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEFKMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIRYEKLPELCSF
Homology
BLAST of Lag0011444 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 156.0 bits (393), Expect = 3.7e-34
Identity = 81/210 (38.57%), Postives = 116/210 (55.24%), Query Frame = 0
Query: 47 EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKA 106
E+L+ +W+KF LT+EE+E +DVD A + + L +SL+GKLLA R+IS +V+ +
Sbjct: 4 ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63
Query: 107 AWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 166
AW + + LTVE +G NLFLF E + RV++ PW FDK +++L KP +EF
Sbjct: 64 AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123
Query: 167 KM------------------------------------ENG--WKESLRVRVQLDISKPL 219
E G W SLR+RV +DI+KPL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183
BLAST of Lag0011444 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 144.8 bits (364), Expect = 8.6e-31
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 0
Query: 48 DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAA 107
DL+E W+ F LT+EEEET +DVD A TG L L+GKL R I+ VM+ + A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 108 WNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 167
W + N V+ LG NLFLF+ ++ ++ + PW FD+ +++++KP+ ++ ++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 168 --------------------------------------KMENGWKESLRVRVQLDISKPL 217
+ W +LRVRV LDISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
BLAST of Lag0011444 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 134.8 bits (338), Expect = 8.9e-28
Identity = 71/209 (33.97%), Postives = 110/209 (52.63%), Query Frame = 0
Query: 45 AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNF 104
A +L+E W+ F LT+EE++ VD+D A TG+ L SLI KLL+ R IS V++
Sbjct: 2 AASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTL 61
Query: 105 KAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQA 164
K AW + +V+ +G N+FLF ++ R+L+ PW FD+ ++++ P+ + K
Sbjct: 62 KIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLD 121
Query: 165 MEFK---------------------------------MENG-----WKESLRVRVQLDIS 215
M+F+ +E+ W LRVRV+ D+
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVM 181
BLAST of Lag0011444 vs. NCBI nr
Match:
XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])
HSP 1 Score: 106.7 bits (265), Expect = 2.6e-19
Identity = 62/208 (29.81%), Postives = 101/208 (48.56%), Query Frame = 0
Query: 47 EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKA 106
+++ + WE F T +E ET V +DR ++T ++ ++ KL + IS E +R K+
Sbjct: 2 DEITDLWEHFKSTNDENET-VTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61
Query: 107 AWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 166
W + N E LG+N+++ ++ E++RVL PW F+K +L+L+ P + M F
Sbjct: 62 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121
Query: 167 KM-------------------------------------ENGWK-ESLRVRVQLDISKPL 217
+GW +RVRV++D+SKPL
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 181
BLAST of Lag0011444 vs. NCBI nr
Match:
TXG51459.1 (hypothetical protein EZV62_023983 [Acer yangbiense])
HSP 1 Score: 95.9 bits (237), Expect = 4.6e-16
Identity = 44/132 (33.33%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 85 LIGKLLAPRVISGEVMRKNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWL 144
L+GK+L+ + ++ E + + W+ + +E +GLN+F+F + E+ R+ Q+ PW
Sbjct: 41 LVGKILSSKRVNREAFKNLIEQLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQRGPWY 100
Query: 145 FDKYILMLSKPIPMVKSQAMEFKMENGWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCW 204
FDK +++L KP V E K + W + ++V+VQ+DISKPL++ +++KLD+
Sbjct: 101 FDKSLIVLEKPEGCVIDIPTESK--DCWGKFMKVKVQIDISKPLKRWLRLKLDKSNNIVM 160
Query: 205 SPIRYEKLPELC 217
++YE+LP+ C
Sbjct: 161 VSLKYERLPKFC 170
BLAST of Lag0011444 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.8e-34
Identity = 81/210 (38.57%), Postives = 116/210 (55.24%), Query Frame = 0
Query: 47 EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKA 106
E+L+ +W+KF LT+EE+E +DVD A + + L +SL+GKLLA R+IS +V+ +
Sbjct: 4 ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63
Query: 107 AWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 166
AW + + LTVE +G NLFLF E + RV++ PW FDK +++L KP +EF
Sbjct: 64 AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123
Query: 167 KM------------------------------------ENG--WKESLRVRVQLDISKPL 219
E G W SLR+RV +DI+KPL
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183
BLAST of Lag0011444 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 4.2e-31
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 0
Query: 48 DLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKAA 107
DL+E W+ F LT+EEEET +DVD A TG L L+GKL R I+ VM+ + A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 108 WNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 167
W + N V+ LG NLFLF+ ++ ++ + PW FD+ +++++KP+ ++ ++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 168 --------------------------------------KMENGWKESLRVRVQLDISKPL 217
+ W +LRVRV LDISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
BLAST of Lag0011444 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 4.3e-28
Identity = 71/209 (33.97%), Postives = 110/209 (52.63%), Query Frame = 0
Query: 45 AFEDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNF 104
A +L+E W+ F LT+EE++ VD+D A TG+ L SLI KLL+ R IS V++
Sbjct: 2 AASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTL 61
Query: 105 KAAWNIP-NGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQA 164
K AW + +V+ +G N+FLF ++ R+L+ PW FD+ ++++ P+ + K
Sbjct: 62 KIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLD 121
Query: 165 MEFK---------------------------------MENG-----WKESLRVRVQLDIS 215
M+F+ +E+ W LRVRV+ D+
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVM 181
BLAST of Lag0011444 vs. ExPASy TrEMBL
Match:
A0A2N9IG44 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50952 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 5.6e-20
Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 0
Query: 45 AFEDLIENWEKFNLTAEEE---ETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMR 104
A + L+E+W KF+LT E + E DV ++ + + L+GKL+ ++ S EV++
Sbjct: 136 ASDALLEDWRKFSLTETEAPSFKVEEDVMGESRTIGSK----CLLGKLITDKLFSKEVLK 195
Query: 105 KNFKAAWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSK---PIPM 164
W G+T + NLF F E E+ RVL PWLFD Y+L L + IP
Sbjct: 196 TTMLRLWGASRGITTTNISDNLFAFQFPNEYERMRVLNGAPWLFDNYLLALQEFDGSIPA 255
Query: 165 VKSQAMEFKMEN-GWKESLRVRVQLDISKPLRQGIKVKLDEPLGSCWSPIRYEKLPELC 217
+K + ++ GW +LRVR+QLD ++P+ +G + LG W RYE+LP +C
Sbjct: 256 IKVKEVDAPENGIGWGSALRVRLQLDFTRPIPRGRLISFSS-LGQMWVSFRYERLPWIC 309
BLAST of Lag0011444 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19
Identity = 62/208 (29.81%), Postives = 101/208 (48.56%), Query Frame = 0
Query: 47 EDLIENWEKFNLTAEEEETEVDVDRQAAVVTGRSLGFSLIGKLLAPRVISGEVMRKNFKA 106
+++ + WE F T +E ET V +DR ++T ++ ++ KL + IS E +R K+
Sbjct: 2 DEITDLWEHFKSTNDENET-VTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61
Query: 107 AWNIPNGLTVEKLGLNLFLFTLRTEEEQTRVLQQKPWLFDKYILMLSKPIPMVKSQAMEF 166
W + N E LG+N+++ ++ E++RVL PW F+K +L+L+ P + M F
Sbjct: 62 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121
Query: 167 KM-------------------------------------ENGWK-ESLRVRVQLDISKPL 217
+GW +RVRV++D+SKPL
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 3.7e-34 | 38.57 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022158377.1 | 8.6e-31 | 35.58 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_022132681.1 | 8.9e-28 | 33.97 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022149484.1 | 2.6e-19 | 29.81 | uncharacterized protein LOC111017902 [Momordica charantia] | [more] |
TXG51459.1 | 4.6e-16 | 33.33 | hypothetical protein EZV62_023983 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 1.8e-34 | 38.57 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX30 | 4.2e-31 | 35.58 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1BSZ1 | 4.3e-28 | 33.97 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A2N9IG44 | 5.6e-20 | 34.64 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5095... | [more] |
A0A6J1D765 | 1.3e-19 | 29.81 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |