Lag0011378 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011378
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAA_kinase domain-containing protein
Locationchr1: 23263707 .. 23264285 (-)
RNA-Seq ExpressionLag0011378
SyntenyLag0011378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGTGTTGCATGTGAATGATGTAACTAAGGAAAGGGCGGCTCTATTATTCCCTATAGCGACCGGTCGCTCAGTAGACGTAGGGAAAGTGATTCATACTTCCATGCACCGGATTCGCAGAGGAGCCACCACCGTAGGGCTAGGACACTCGTTCCTCATGACAGCACTCTGTAGGACTGCTGGGGTCGAGTGGGGCCCCCGTGAGGAGATTAGTCATCATGCAGCTGTGATTGATGGGAACTTCATTATGACCAGACTTAGGGAACCTACACCTAGGGTAGCTCGCCCACCACCACAGCCGCAGTAGGAAGAACTAGCAGATGAGCCCCAAGAGTAGGAAGAGCAGCCCCACATTGAGCATCCACCTCTCACGCTTGAGGCGTTGGAGGAGAGGATGAAGCAGATGAGACTCGTGCTACTGCGCCAATATGAGAGCCAACAACGTAGGGAGGCTAGGCACTTTAGACAATCTGAGGCGCAATTCGCTTATATTCAACAGTACATCATTGCTTCGACGTCTGGACACCCTCTTCCACTACCGCTGCCACCTTATGAGTCTCCTGAGGATGAGGAGTGA

mRNA sequence

ATGCCTGTGTTGCATGTGAATGATGTAACTAAGGAAAGGGCGGCTCTATTATTCCCTATAGCGACCGGTCGCTCAGTAGACGTAGGGAAAGTGATTCATACTTCCATGCACCGGATTCGCAGAGGAGCCACCACCGTAGGGCTAGGACACTCGTTCCTCATGACAGCACTCTGTAGGACTGCTGGGGTCGAGTGGGGCCCCCGTGAGGAGATTAGTCATCATGCAGCTGTGATTGATGGGAACTTCATTATGACCAGACTTAGGGAACCTACACCTAGGGCGTTGGAGGAGAGGATGAAGCAGATGAGACTCGTGCTACTGCGCCAATATGAGAGCCAACAACGTAGGGAGGCTAGGCACTTTAGACAATCTGAGGCGCAATTCGCTTATATTCAACAGTACATCATTGCTTCGACGTCTGGACACCCTCTTCCACTACCGCTGCCACCTTATGAGTCTCCTGAGGATGAGGAGTGA

Coding sequence (CDS)

ATGCCTGTGTTGCATGTGAATGATGTAACTAAGGAAAGGGCGGCTCTATTATTCCCTATAGCGACCGGTCGCTCAGTAGACGTAGGGAAAGTGATTCATACTTCCATGCACCGGATTCGCAGAGGAGCCACCACCGTAGGGCTAGGACACTCGTTCCTCATGACAGCACTCTGTAGGACTGCTGGGGTCGAGTGGGGCCCCCGTGAGGAGATTAGTCATCATGCAGCTGTGATTGATGGGAACTTCATTATGACCAGACTTAGGGAACCTACACCTAGGGCGTTGGAGGAGAGGATGAAGCAGATGAGACTCGTGCTACTGCGCCAATATGAGAGCCAACAACGTAGGGAGGCTAGGCACTTTAGACAATCTGAGGCGCAATTCGCTTATATTCAACAGTACATCATTGCTTCGACGTCTGGACACCCTCTTCCACTACCGCTGCCACCTTATGAGTCTCCTGAGGATGAGGAGTGA

Protein sequence

MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRTAGVEWGPREEISHHAAVIDGNFIMTRLREPTPRALEERMKQMRLVLLRQYESQQRREARHFRQSEAQFAYIQQYIIASTSGHPLPLPLPPYESPEDEE
Homology
BLAST of Lag0011378 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-15
Identity = 69/204 (33.82%), Postives = 97/204 (47.55%), Query Frame = 0

Query: 1   MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRT 60
           +PV H + VTKERA LL+ IAT RSVDVGKVIH S+  IR+   T GLGHS L+TALCR 
Sbjct: 179 LPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKSLCNIRKSGMTGGLGHSSLITALCRN 238

Query: 61  AGVEWGPREEISHHAAVIDGNFIM------------------------------TRLREP 120
            GV W  +EE+     ++D NFIM                                  EP
Sbjct: 239 EGVVWNEKEELVDPKPIMDKNFIMGIPGWSFETMGAGHCDETAGASHCNKTPDAGHHDEP 298

Query: 121 TPRALEERMKQMR--------------LVLLRQYESQQRREARHFRQSEAQFAYIQQYII 158
           + +   E ++++R              L L  Q +  +RR   + R+SE +F ++ + + 
Sbjct: 299 SDQDEAEPIREVRQTLTIDLPRQTQRPLSLDEQIQRLERRVRSYHRRSEERFDHLYKCLF 358

BLAST of Lag0011378 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-15
Identity = 69/204 (33.82%), Postives = 97/204 (47.55%), Query Frame = 0

Query: 1   MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRT 60
           +PV H + VTKERA LL+ IAT RSVDVGKVIH S+  IR+   T GLGHS L+TALCR 
Sbjct: 117 LPVAHTSSVTKERAILLYAIATKRSVDVGKVIHKSLCNIRKSGMTGGLGHSSLITALCRN 176

Query: 61  AGVEWGPREEISHHAAVIDGNFIM------------------------------TRLREP 120
            GV W  +EE+     ++D NFIM                                  EP
Sbjct: 177 EGVVWNEKEELVDPKPIMDKNFIMGIPGWSFETMGAGHCDETAGASHCNKTPDAGHHDEP 236

Query: 121 TPRALEERMKQMR--------------LVLLRQYESQQRREARHFRQSEAQFAYIQQYII 158
           + +   E ++++R              L L  Q +  +RR   + R+SE +F ++ + + 
Sbjct: 237 SDQDEAEPIREVRQTLTIDLPRQTQRPLSLDEQIQRLERRVRSYHRRSEERFDHLYKCLF 296

BLAST of Lag0011378 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-14
Identity = 67/204 (32.84%), Postives = 95/204 (46.57%), Query Frame = 0

Query: 1   MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRT 60
           +PV H + VTKERA LL+ IAT RSVDVGKVI  S+  IR+   T GLGHS L+TALCR 
Sbjct: 179 LPVAHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCRN 238

Query: 61  AGVEWGPREEISHHAAVIDGNFIMT------------------------------RLREP 120
            GV W  +EE+     ++D +FIM                                  EP
Sbjct: 239 EGVVWNEKEELVDPKPIMDKSFIMEIPGWSFEPMGAGHCDETAGTSHCNKTTDAGHNDEP 298

Query: 121 TPRALEERMKQMR--------------LVLLRQYESQQRREARHFRQSEAQFAYIQQYII 158
           + +   E ++++R              L L  Q    +RR   + R+SE +F ++ + + 
Sbjct: 299 SDQDEAEPIREVRQTLTIDLPRQTQRPLSLDEQIRRLERRVRSYHRRSEERFDHLYKCLF 358

BLAST of Lag0011378 vs. NCBI nr
Match: KZM87636.1 (hypothetical protein DCAR_031924 [Daucus carota subsp. sativus])

HSP 1 Score: 72.0 bits (175), Expect = 5.1e-09
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query: 1   MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRT 60
           MP  H ++VT +RA LLF I +G+ +D+G VIH  + R  +G TT  + +  ++T LCR+
Sbjct: 134 MPSSHGHEVTVDRAILLFGIVSGKYIDLGHVIHQGILRFLQGGTTGAIPYGTIVTKLCRS 193

Query: 61  AGVEWGPREEISHHAAVIDGNFIMTRLRE-----PTPRAL 96
           +GV W   E++   AA ID + I +R+ E     P PR L
Sbjct: 194 SGVRWPANEQLQLPAAPIDHSAI-SRMTEWDGGVPHPRGL 232

BLAST of Lag0011378 vs. NCBI nr
Match: KZM94204.1 (hypothetical protein DCAR_017447 [Daucus carota subsp. sativus])

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-09
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query: 1   MPVLHVNDVTKERAALLFPIATGRSVDVGKVIHTSMHRIRRGATTVGLGHSFLMTALCRT 60
           MP  H ++VT +RA LLF I +G+ +D+G VIH  + R  +G TT  + +  ++T LCR 
Sbjct: 198 MPSSHGHEVTVDRAILLFGIVSGKYIDLGHVIHQGILRFLQGGTTGAIPYGTIVTKLCRA 257

Query: 61  AGVEWGPREEISHHAAVIDGNFIMTRLRE-----PTPRAL 96
           +GV W   E++   AA ID + I +R+ E     P PR L
Sbjct: 258 SGVRWPANEQLQLPAAPIDHSAI-SRMTEWDGGVPHPRGL 296

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033353.12.2e-1533.82putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
XP_008458668.12.2e-1533.82PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo][more]
KGN46897.19.0e-1432.84hypothetical protein Csa_020731 [Cucumis sativus][more]
KZM87636.15.1e-0940.00hypothetical protein DCAR_031924 [Daucus carota subsp. sativus][more]
KZM94204.16.7e-0940.00hypothetical protein DCAR_017447 [Daucus carota subsp. sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011378.1Lag0011378.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006561 proline biosynthetic process
cellular_component GO:0005829 cytosol
molecular_function GO:0004349 glutamate 5-kinase activity