Lag0010514 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCCTTTTGGAGTGAACCAAAAGCAAAGCCATGAGGGTTATGCCCAAAGTGGACAATATCATACGATTGTGGAGATATGTGTAGTGTCCCGTAATTCCTTATCATCTCTTATCAGAGCATACTCTTATTCTCTCAAAAACTCACTGCCGCACGTCACTGTCTTCCCAATAGCAAGAGAACAACCTAATGGGCCTGACCCATTTATTTCTTTCTTTTCGTGCAAGCATGCTGAGGGATGAGTTTTGTCTCCACACACAATCCTGACACAATTCAACTTTTGTTTTTGTTTCTATAAACCAATCTTCTTCTTTTCTCCTCTCCATTCAAATTCACACTTGTTGCTCTCTTCCTCCTAAAGATCAACAAGTTATATTGGTAATATATATAACATCTCATATTTTATATATATTAATTTGCGTTTTCCTTTTCATGTGTGTTCATTATATCTTCTCTACCAAATTATAAATAAGACAATTCTACTTTTCTCGTTGTTGGTTTGTTTTGTAGGATCAAGTGGCTCGAATGCTTAGAATTAAGGAGAAAGTTGAAGATGACCTTCGAAAATTTCATAATTTGTATCCGAGAGCCAAAGAGATGGGATTTGGTCGATTTTTTTTATCTCCAACTCTTTTTGAAGATGCGGTGAAGTCCATCCTTCTATGCAATATCTCGTAAGTTTTTTTTTTCTCTCTCTAATTACTTGCTCATATGGTATTTTAAAGTTATGTATGCTCATCTTAATTAAATTAACAAAATTTTAAAATTTATATATGTTTTGATAGGTGTTGTGTTGATGCATGTTTGGTTTATTCGTCACTCTTTGCTTACCTAATAATTTAACCTCTCATGTGACACTAGAAGGAAATAACATAAAAATGCTTACTCAACCTACGACTATTTATTTTTTTTTTGAAAAAATAATGTCTGCATTTCTCTCTGGTATGGGTAAAAAACATGATAGATATTGGTGAAGTGGTAGAGAGCAAAAGGTCAGAGAGTACATGTCAATTACCGCTGAGTTAAGCTCGCTTTGGCTTATTATTATTATTATTATTTCAATTTTATATTTGTTTCCGATTCAATTAATTGTAACCCTTTCACAAATTTCTTTTCAGTGGGTGGCAAAGAAGTTCTTATTAAAAGCGTAGTTCAGGCTATACCCACATATGTCATGAGTTGTTTTTGGTTACCACAAACTCTTTGTGATGATATTCATAGAACGATGGCACGCTTTTGGTGGGGATCCACCTCTACCAAAAAGAAAATACAATGGAAGAAATGGGCGGATTTATGCCTTCCTAAAGAATTAGGGGGGTTAAATTTTAGAGATCTGGCAAGCTTTAACAAGGCACTATTAGCTAAACAGGTGTGGCGACTTTTCACTATCCTCCAATTATTGGCGTCGAGAGTCATTCATGGTAGATATGCACACCAAAACCAGTTGTTGCAAGCTCCAATCAAAACAAATTGTTCCGTCTTTTGGTGGGGTTTGGTGTGGGCTCGAGATCTATTACTAGCTGGCATGCGACATCGAGTGGGAAATGGTACAACTACAGATTTCTTTAACGATCTCTGGATCCCAAAAGAAGTAACACTCATGCCTATGCAAATTCATGAAGCGATAGTACCGGAAGGGTTGGAGGTGGCCGACTTTATCACCCCGTCTTTAGGATGGGATTTGAGCAAACTTAGAAGTTTCGTGGTTGAAGAGGACACAAGGCTTATAGCAACAATTCCAATAATTGTTGCAGAAGAAATGATAAATGGATATGGCACTATACGTCTACAGGAGAGTATATAG ATGAGGCCTTTTGGAGTGAACCAAAAGCAAAGCCATGAGGGTTATGCCCAAAGTGGACAATATCATACGATTGTGGAGATATGTGTAGTGTCCCGTAATTCCTTATCATCTCTTATCAGAGCATACTCTTATTCTCTCAAAAACTCACTGCCGCACGATCAAGTGGCTCGAATGCTTAGAATTAAGGAGAAAGTTGAAGATGACCTTCGAAAATTTCATAATTTGTATCCGAGAGCCAAAGAGATGGGATTTGGTCGATTTTTTTTATCTCCAACTCTTTTTGAAGATGCGGTGAAGTCCATCCTTCTATGCAATATCTCAACGATGGCACGCTTTTGGTGGGGATCCACCTCTACCAAAAAGAAAATACAATGGAAGAAATGGGCGGATTTATGCCTTCCTAAAGAATTAGGGGGGTTAAATTTTAGAGATCTGGCAAGCTTTAACAAGGCACTATTAGCTAAACAGGTGTGGCGACTTTTCACTATCCTCCAATTATTGGCGTCGAGAGTCATTCATGGTAGATATGCACACCAAAACCAGTTGTTGCAAGCTCCAATCAAAACAAATTGTTCCGTCTTTTGGTGGGGTTTGGTGTGGGCTCGAGATCTATTACTAGCTGGCATGCGACATCGAGTGGGAAATGGTACAACTACAGATTTCTTTAACGATCTCTGGATCCCAAAAGAAGTAACACTCATGCCTATGCAAATTCATGAAGCGATAGTACCGGAAGGGTTGGAGGTGGCCGACTTTATCACCCCGTCTTTAGGATGGGATTTGAGCAAACTTAGAAGTTTCGTGGTTGAAGAGGACACAAGGCTTATAGCAACAATTCCAATAATTGTTGCAGAAGAAATGATAAATGGATATGGCACTATACGTCTACAGGAGAGTATATAG ATGAGGCCTTTTGGAGTGAACCAAAAGCAAAGCCATGAGGGTTATGCCCAAAGTGGACAATATCATACGATTGTGGAGATATGTGTAGTGTCCCGTAATTCCTTATCATCTCTTATCAGAGCATACTCTTATTCTCTCAAAAACTCACTGCCGCACGATCAAGTGGCTCGAATGCTTAGAATTAAGGAGAAAGTTGAAGATGACCTTCGAAAATTTCATAATTTGTATCCGAGAGCCAAAGAGATGGGATTTGGTCGATTTTTTTTATCTCCAACTCTTTTTGAAGATGCGGTGAAGTCCATCCTTCTATGCAATATCTCAACGATGGCACGCTTTTGGTGGGGATCCACCTCTACCAAAAAGAAAATACAATGGAAGAAATGGGCGGATTTATGCCTTCCTAAAGAATTAGGGGGGTTAAATTTTAGAGATCTGGCAAGCTTTAACAAGGCACTATTAGCTAAACAGGTGTGGCGACTTTTCACTATCCTCCAATTATTGGCGTCGAGAGTCATTCATGGTAGATATGCACACCAAAACCAGTTGTTGCAAGCTCCAATCAAAACAAATTGTTCCGTCTTTTGGTGGGGTTTGGTGTGGGCTCGAGATCTATTACTAGCTGGCATGCGACATCGAGTGGGAAATGGTACAACTACAGATTTCTTTAACGATCTCTGGATCCCAAAAGAAGTAACACTCATGCCTATGCAAATTCATGAAGCGATAGTACCGGAAGGGTTGGAGGTGGCCGACTTTATCACCCCGTCTTTAGGATGGGATTTGAGCAAACTTAGAAGTTTCGTGGTTGAAGAGGACACAAGGCTTATAGCAACAATTCCAATAATTGTTGCAGAAGAAATGATAAATGGATATGGCACTATACGTCTACAGGAGAGTATATAG MRPFGVNQKQSHEGYAQSGQYHTIVEICVVSRNSLSSLIRAYSYSLKNSLPHDQVARMLRIKEKVEDDLRKFHNLYPRAKEMGFGRFFLSPTLFEDAVKSILLCNISTMARFWWGSTSTKKKIQWKKWADLCLPKELGGLNFRDLASFNKALLAKQVWRLFTILQLLASRVIHGRYAHQNQLLQAPIKTNCSVFWWGLVWARDLLLAGMRHRVGNGTTTDFFNDLWIPKEVTLMPMQIHEAIVPEGLEVADFITPSLGWDLSKLRSFVVEEDTRLIATIPIIVAEEMINGYGTIRLQESI Homology
BLAST of Lag0010514 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia]) HSP 1 Score: 179.9 bits (455), Expect = 3.3e-41 Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 0
BLAST of Lag0010514 vs. NCBI nr
Match: XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa]) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-32 Identity = 74/173 (42.77%), Postives = 97/173 (56.07%), Query Frame = 0
BLAST of Lag0010514 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 149.8 bits (377), Expect = 3.7e-32 Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0
BLAST of Lag0010514 vs. NCBI nr
Match: XP_022568650.1 (uncharacterized protein LOC106442391 [Brassica napus]) HSP 1 Score: 148.7 bits (374), Expect = 8.2e-32 Identity = 71/181 (39.23%), Postives = 104/181 (57.46%), Query Frame = 0
BLAST of Lag0010514 vs. NCBI nr
Match: XP_013617205.1 (PREDICTED: uncharacterized protein LOC106323665 [Brassica oleracea var. oleracea]) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-31 Identity = 71/179 (39.66%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.7e-22 Identity = 56/140 (40.00%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41 Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy TrEMBL
Match: A0A803PTB0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 9.4e-34 Identity = 74/170 (43.53%), Postives = 97/170 (57.06%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy TrEMBL
Match: A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 8.0e-33 Identity = 74/173 (42.77%), Postives = 97/173 (56.07%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32 Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0
BLAST of Lag0010514 vs. ExPASy TrEMBL
Match: A0A803PKJ2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.0e-32 Identity = 75/175 (42.86%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Lag0010514 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23 Identity = 56/140 (40.00%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of Lag0010514 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20 Identity = 56/181 (30.94%), Postives = 88/181 (48.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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