Lag0009849 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCTGGTTCATCGCCATGTGCGTCCTGCAAGTTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGTCAGCTTTCTTCTTTTCTATGCCTTTTTATCCTTCTTTTTAAATTAGTTTCGGGGCCACGTGTGAGGCGGAGAATTTAAGATTTTGAGCGGGTGACGTTTAGTTTAGACGTGTAAGGACTCGATCGTGCTTAGGTTGGCTTCTGTCTCCCTGGCTTGTGAGGTGTAGTCTTCTTGATTTAAGAGAATTGTTTAAAACGGTGTCGAACAGTAGTACGTTAGGGTTTTAGTCACGTTGTGACAACTAGTTCAATCCAAAAGCTATGGTAGATTTAATTATATCAACTATTAGACTCTCTTTTATCGGTAGTGAAGTAATTTCTTCCGACTTTGATTTAGGTTAAAAAATCATACGATTTTATGATTTTCTTTCTGAATTTTAAACATTTACAAACAACAACATAGAATAAGGTCTTATACGAAAGTTTCTGGCTCCTTCTCTTCTCTGATGATAGAATGTGATTAATCTTGTGCAGGAGCTACCGGTTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGTGCGAGAATGCGAGATCCAGTCTACGGCTGTGTTGGGACGATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAAGCGCAGGCAGAGATACTAAGCTTTCAGATGCAACAACAGGTAGCTCCGACCACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCATTTTTTTTCGCACATCCTGCCGATTCTTCTCATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTATGGACCTAA ATGGGAGCTGGTTCATCGCCATGTGCGTCCTGCAAGTTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGAGCTACCGGTTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGTGCGAGAATGCGAGATCCAGTCTACGGCTGTGTTGGGACGATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAAGCGCAGGCAGAGATACTAAGCTTTCAGATGCAACAACAGGTAGCTCCGACCACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCATTTTTTTTCGCACATCCTGCCGATTCTTCTCATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTATGGACCTAA ATGGGAGCTGGTTCATCGCCATGTGCGTCCTGCAAGTTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGAGCTACCGGTTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGTGCGAGAATGCGAGATCCAGTCTACGGCTGTGTTGGGACGATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAAGCGCAGGCAGAGATACTAAGCTTTCAGATGCAACAACAGGTAGCTCCGACCACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCATTTTTTTTCGCACATCCTGCCGATTCTTCTCATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTATGGACCTAA MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPVDKRADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMQQQVAPTTFPTMEMDLYDQDPFFFAHPADSSHSINSFQEVEDYCSLWT Homology
BLAST of Lag0009849 vs. NCBI nr
Match: KAG6605396.1 (LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035343.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255.4 bits (651), Expect = 3.3e-64 Identity = 125/160 (78.12%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of Lag0009849 vs. NCBI nr
Match: XP_022947802.1 (LOB domain-containing protein 12-like [Cucurbita moschata]) HSP 1 Score: 253.8 bits (647), Expect = 9.7e-64 Identity = 124/160 (77.50%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of Lag0009849 vs. NCBI nr
Match: XP_023533075.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63 Identity = 124/160 (77.50%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of Lag0009849 vs. NCBI nr
Match: XP_023006803.1 (LOB domain-containing protein 12-like [Cucurbita maxima]) HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62 Identity = 123/160 (76.88%), Postives = 141/160 (88.12%), Query Frame = 0
BLAST of Lag0009849 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 0
BLAST of Lag0009849 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 192.6 bits (488), Expect = 3.5e-48 Identity = 96/131 (73.28%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of Lag0009849 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38 Identity = 74/118 (62.71%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of Lag0009849 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 158.3 bits (399), Expect = 7.2e-38 Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Lag0009849 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.2e-38 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Lag0009849 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36 Identity = 68/118 (57.63%), Postives = 92/118 (77.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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