Lag0009435 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009435
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	nuclear transcription factor Y subunit B-3-like
Location	chr9: 39267621 .. 39268241 (-)
RNA-Seq Expression	Lag0009435
Synteny	Lag0009435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCGGATAACGAGTCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGACGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCAGCGAACGCGAAGATCTCAAAAGATGCGAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTCATAAGCTTCATAACGGGAGAGGCGTCGGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGTGGTGGGCCCGGCGGAAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATATAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCATCAGGGAGGTGTTTATGGCGGTGGAGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

mRNA sequence

ATGGCGGATTCGGATAACGAGTCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGACGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCAGCGAACGCGAAGATCTCAAAAGATGCGAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTCATAAGCTTCATAACGGGAGAGGCGTCGGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGTGGTGGGCCCGGCGGAAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATATAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCATCAGGGAGGTGTTTATGGCGGTGGAGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Coding sequence (CDS)

ATGGCGGATTCGGATAACGAGTCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGACGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCAGCGAACGCGAAGATCTCAAAAGATGCGAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTCATAAGCTTCATAACGGGAGAGGCGTCGGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGTGGTGGGCCCGGCGGAAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATATAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCATCAGGGAGGTGTTTATGGCGGTGGAGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Protein sequence

MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR

Homology

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BLAST of Lag0009435 vs. NCBI nr
Match: XP_023532503.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 196/208 (94.23%), Postives = 200/208 (96.15%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGGGGGPGGSGAN-GGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHHHQG 180
            G +GEKDGGGGGGGPGGSGAN GGGGVNPGTGGG  GGG+NGVGGMYGGMMMMG HHQG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMG-HHQG 180

Query: 181 GVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           GVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 GVYGSGGFHHMGIGGGKGGNGGSGTGHR 207

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BLAST of Lag0009435 vs. NCBI nr
Match: XP_022971106.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita maxima])

HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGGGGGPGGSGAN----GGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHH 180
            G +GEKDGGGGGGGPGGSGAN    GGGGVNPGTGGG  GGG+NGVGGMYGGMMMM  H
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMM-VH 180

Query: 181 HQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           HQGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 HQGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

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BLAST of Lag0009435 vs. NCBI nr
Match: XP_022947534.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGGGGGPGGSGAN----GGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHH 180
            G +GEKDGGGGGGGPGGSGAN    GGGGVNPGTGGG  GGG+NGVGGMYGGMMMMG H
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMG-H 180

Query: 181 HQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           HQGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 HQGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

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BLAST of Lag0009435 vs. NCBI nr
Match: XP_038901772.1 (nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 nuclear transcription factor Y subunit B-3 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.4e-85
Identity = 193/209 (92.34%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGGAGGGGYNG--VGGMYGGMMMMG-HHHQ 180
           GRQGEKD  GGGGGPGGSGANGGGG     GGG GGGG N    GGMYGGMMMMG HHHQ
Sbjct: 121 GRQGEKD--GGGGGPGGSGANGGGG-----GGGGGGGGVNSGTTGGMYGGMMMMGHHHHQ 180

Query: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           GGVYGGGGFHHMGIGGGKGGSGGSGTGHR
Sbjct: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 202

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BLAST of Lag0009435 vs. NCBI nr
Match: XP_008464158.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_008464159.1 PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >KAA0060811.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa] >TYK08821.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 190/207 (91.79%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVN-PGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGG 180
           GRQGEKD  GGGGGPGGS    GGGVN  GT  G  GGGYNGVGGMYGG+MMMG HHQGG
Sbjct: 121 GRQGEKD--GGGGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMG-HHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           VYGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 VYGGAGFHHMGIGGGKGGSGASGTGHR 200

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BLAST of Lag0009435 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54
Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  ST+EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGGGGGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

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BLAST of Lag0009435 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.9e-45
Identity = 138/227 (60.79%), Postives = 152/227 (66.96%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M DSDNESGG  SNA    S +EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RE+EGEK+ +
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA-I 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMG------- 180
           G  G   GGGG    GGSG+  G G +         GGY   GG  G +MMMG       
Sbjct: 121 GAAG--SGGGGAASSGGSGS--GSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPMYGSP 180

Query: 181 --------------HHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
                         HHH   V GG G +  G GGG G S  SG G +
Sbjct: 181 PASSAGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGGGPSPSSGYGRQ 221

[Close]

BLAST of Lag0009435 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.6e-43
Identity = 121/208 (58.17%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHHH 180
           ++ +GR                   G  G +     G GGG Y G GGM         H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 205
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

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BLAST of Lag0009435 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40
Identity = 130/215 (60.47%), Postives = 144/215 (66.98%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELST-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M DSDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKST 120
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE++ 
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 MGRQGEKDGGGGGGGPGGS-GANGGGGVNPGTGGGAGGGGYNGVGG--MYGG-----MMM 180
               G          P     AN  GG       GAG GG   + G  MYG         
Sbjct: 121 ASTTGAGTSAASTTPPQQQHTANAAGGYAGYAAPGAGPGGMMMMMGQPMYGSPPPPPQQQ 180

Query: 181 MGHHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
              HH   + G GGF H   GGG G S  SG G +
Sbjct: 181 QQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHGRQ 215

[Close]

BLAST of Lag0009435 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 113/195 (57.95%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 11  HNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 70
           +      +   KEQDRFLPIANVSRIMK++LPANAKISK++KETVQECVSEFISF+TGEA
Sbjct: 46  YGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEA 105

Query: 71  SDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGG 130
           SDKCQREKRKTINGDDLLWAMTTLGFE YV PLK+YL +YRE EGEK+ +          
Sbjct: 106 SDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEKADV---------L 165

Query: 131 GGGGPGGSGANGGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGGVYGGGGFHHMG 190
           GG G   +  +G GG   G GGGA G   +G   + GG+    H HQ     GGG   + 
Sbjct: 166 GGAGGAAAARHGEGGCCGGGGGGADGVVIDGHYPLAGGLSHSHHGHQ--QQDGGGDVGLM 225

Query: 191 IGGGKGGSG-GSGTG 205
           +GGG  G G  +G G
Sbjct: 226 MGGGDAGVGYNAGAG 229

[Close]

BLAST of Lag0009435 vs. ExPASy TrEMBL
Match: A0A6J1I2E0 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469875 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.8e-88
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGGGGGPGGSGAN----GGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHH 180
            G +GEKDGGGGGGGPGGSGAN    GGGGVNPGTGGG  GGG+NGVGGMYGGMMMM  H
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMM-VH 180

Query: 181 HQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           HQGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 HQGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Lag0009435 vs. ExPASy TrEMBL
Match: A0A6J1G731 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451370 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGGGGGPGGSGAN----GGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHH 180
            G +GEKDGGGGGGGPGGSGAN    GGGGVNPGTGGG  GGG+NGVGGMYGGMMMMG H
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMG-H 180

Query: 181 HQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           HQGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 HQGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Lag0009435 vs. ExPASy TrEMBL
Match: A0A1S3CMC5 (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.2e-84
Identity = 190/207 (91.79%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVN-PGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGG 180
           GRQGEKD  GGGGGPGGS    GGGVN  GT  G  GGGYNGVGGMYGG+MMMG HHQGG
Sbjct: 121 GRQGEKD--GGGGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMG-HHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           VYGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 VYGGAGFHHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Lag0009435 vs. ExPASy TrEMBL
Match: A0A5A7V4W8 (Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00280 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.2e-84
Identity = 190/207 (91.79%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVN-PGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGG 180
           GRQGEKD  GGGGGPGGS    GGGVN  GT  G  GGGYNGVGGMYGG+MMMG HHQGG
Sbjct: 121 GRQGEKD--GGGGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMG-HHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGGSGTGHR 207
           VYGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 VYGGAGFHHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Lag0009435 vs. ExPASy TrEMBL
Match: A0A0A0KFU2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82
Identity = 189/208 (90.87%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELS KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGGGPGGSGANGGGGVN-PGTGGGAGGGGYNGVGGMYGGMMMMGHHHQGG 180
           GRQGEKD  GGGGGPGGS    GGGVN  G   G  GGGYNGVGGMYGG+MMMG HHQGG
Sbjct: 121 GRQGEKD--GGGGGPGGS----GGGVNSSGAAAGGAGGGYNGVGGMYGGVMMMG-HHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGG-SGTGHR 207
           VYGG GFHHMGIG GKGGSGG SGTGHR
Sbjct: 181 VYGGAGFHHMGIGSGKGGSGGASGTGHR 201

[Close]

BLAST of Lag0009435 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  ST+EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGGGGGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

[Close]

BLAST of Lag0009435 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 174.9 bits (442), Expect = 6.8e-44
Identity = 121/208 (58.17%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGGGGGPGGSGANGGGGVNPGTGGGAGGGGYNGVGGMYGGMMMMGHHH 180
           ++ +GR                   G  G +     G GGG Y G GGM         H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 205
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

[Close]

BLAST of Lag0009435 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-42
Identity = 87/126 (69.05%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           +A+++  S    +N N+  + KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVS
Sbjct: 15  VAETNPGSPSSKTNNNNN-NNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 74

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK YL KYR+ EGEK   
Sbjct: 75  EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNS 134

Query: 121 GRQGEK 127
            +Q ++
Sbjct: 135 PKQQQQ 139

[Close]

BLAST of Lag0009435 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANS------ELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKET 60
           MA+S    GG  S+ +        L+ +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREME 120
           +QECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK YL +YREME
Sbjct: 61  MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120

Query: 121 GEKSTMGRQGEKDGGGGG 133
           G+    G+ GE      G
Sbjct: 121 GDTKGSGKGGESSAKRDG 138

[Close]

BLAST of Lag0009435 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-41
Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAD+ +   G    +    S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVS
Sbjct: 1   MADTPSSPAGDGGESGG--SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRE+EG+    
Sbjct: 61  EFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGS 120

Query: 121 GRQGEKDGGGGGGGPGG 138
           G+ G+      GGG  G
Sbjct: 121 GKSGDGSNRDAGGGVSG 135

The following BLAST results are available for this feature:

BLAST of Lag0009435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532503.1	1.1e-88	94.23	nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971106.1	1.6e-87	92.42	nuclear transcription factor Y subunit B-3-like [Cucurbita maxima]	[more]
XP_022947534.1	2.1e-87	92.42	nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918...	[more]
XP_038901772.1	3.4e-85	92.34	nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 n...	[more]
XP_008464158.1	1.1e-83	91.79	PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_0084641...	[more]

BLAST of Lag0009435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23310	2.4e-54	81.82	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q69J40	7.9e-45	60.79	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9FGJ3	9.6e-43	58.17	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	2.6e-40	60.47	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0J7P4	1.1e-35	57.95	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Lag0009435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2E0	7.8e-88	92.42	nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G731	1.0e-87	92.42	nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3CMC5	5.2e-84	91.79	nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021...	[more]
A0A5A7V4W8	5.2e-84	91.79	Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KFU2	4.9e-82	90.87	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1124...	[more]

BLAST of Lag0009435 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14540.1	1.7e-55	81.82	nuclear factor Y, subunit B3	[more]
AT5G47640.1	6.8e-44	58.17	nuclear factor Y, subunit B2	[more]
AT2G13570.1	2.9e-42	69.05	nuclear factor Y, subunit B7	[more]
AT3G53340.1	1.1e-41	63.77	nuclear factor Y, subunit B10	[more]
AT2G38880.2	9.2e-41	64.23	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 93..111 score: 44.86 coord: 55..73 score: 50.24 coord: 74..92 score: 38.52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..146
None	No IPR available	PANTHER	PTHR11064:SF128	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3	coord: 1..178
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 27..91 e-value: 2.0E-27 score: 95.2
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 14..131 e-value: 1.0E-47 score: 163.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..127
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..178
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 58..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009435.1	Lag0009435.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding