Lag0009198 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009198
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	bZIP transcription factor 11-like
Location	chr9: 36697353 .. 36697874 (+)
RNA-Seq Expression	Lag0009198
Synteny	Lag0009198

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGTCTTCGACTTGTTCGTCGATGGAGGAAGGGGAATTGGCGGCGTTGATGGAGCAGAGGAAGAGGAAGAGGATGCTTTCGAATCGGGACTCGGCGAGGAGATCGAGGATGAGGAAGCAGAAGCATTTGGACGATTTAATGGCGATGGTCGCCCAGTTGAGGAAGGAAAATCAACAAATCGTGGCGAATCTCGGCGTCACGGCGCAGCACTACGCCGCCGTCGAGTCTGAGAATTCCATTCTCAGAGCTCAGGCGGCGGAGCTGGCCCACCGCCTGCAGTCCTTGATGGAGATCGTTGCTTTCTTGAATCCCTGTGATGGGGTTCTCGAAGATGCCTCTGATTCCTTCGGCGGCGATGATGGCGGCGGCGCTGGTAATAGTGGCTACTTTTGTGCTGACCCGATTCAAGTCGGCGGTGGCGGCGGCGGCGGTGGGGTTTTTTTTAATCCTCTGCAAATGGCTTTCTATATGAGCCAGCCTCTCATGGCTTCTGCTGATGTGTTTGAAGAGTACTGA

mRNA sequence

ATGGCTTCGTCTTCGACTTGTTCGTCGATGGAGGAAGGGGAATTGGCGGCGTTGATGGAGCAGAGGAAGAGGAAGAGGATGCTTTCGAATCGGGACTCGGCGAGGAGATCGAGGATGAGGAAGCAGAAGCATTTGGACGATTTAATGGCGATGGTCGCCCAGTTGAGGAAGGAAAATCAACAAATCGTGGCGAATCTCGGCGTCACGGCGCAGCACTACGCCGCCGTCGAGTCTGAGAATTCCATTCTCAGAGCTCAGGCGGCGGAGCTGGCCCACCGCCTGCAGTCCTTGATGGAGATCGTTGCTTTCTTGAATCCCTGTGATGGGGTTCTCGAAGATGCCTCTGATTCCTTCGGCGGCGATGATGGCGGCGGCGCTGGTAATAGTGGCTACTTTTGTGCTGACCCGATTCAAGTCGGCGGTGGCGGCGGCGGCGGTGGGGTTTTTTTTAATCCTCTGCAAATGGCTTTCTATATGAGCCAGCCTCTCATGGCTTCTGCTGATGTGTTTGAAGAGTACTGA

Coding sequence (CDS)

ATGGCTTCGTCTTCGACTTGTTCGTCGATGGAGGAAGGGGAATTGGCGGCGTTGATGGAGCAGAGGAAGAGGAAGAGGATGCTTTCGAATCGGGACTCGGCGAGGAGATCGAGGATGAGGAAGCAGAAGCATTTGGACGATTTAATGGCGATGGTCGCCCAGTTGAGGAAGGAAAATCAACAAATCGTGGCGAATCTCGGCGTCACGGCGCAGCACTACGCCGCCGTCGAGTCTGAGAATTCCATTCTCAGAGCTCAGGCGGCGGAGCTGGCCCACCGCCTGCAGTCCTTGATGGAGATCGTTGCTTTCTTGAATCCCTGTGATGGGGTTCTCGAAGATGCCTCTGATTCCTTCGGCGGCGATGATGGCGGCGGCGCTGGTAATAGTGGCTACTTTTGTGCTGACCCGATTCAAGTCGGCGGTGGCGGCGGCGGCGGTGGGGTTTTTTTTAATCCTCTGCAAATGGCTTTCTATATGAGCCAGCCTCTCATGGCTTCTGCTGATGTGTTTGAAGAGTACTGA

Protein sequence

MASSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQIVANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDDGGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFEEY

Homology

[Close]

BLAST of Lag0009198 vs. NCBI nr
Match: XP_023534790.1 (bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-58
Identity = 132/171 (77.19%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 3   SSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQI 62
           +SSTCSSMEEGE AALMEQRKRKRM+SNR+SARRSRMRKQKHL+DL+ MV +L +E QQI
Sbjct: 7   TSSTCSSMEEGEFAALMEQRKRKRMISNRESARRSRMRKQKHLEDLITMVRKLNEEKQQI 66

Query: 63  VANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 122
           VANL +TAQ+YAAVE+ NSILRAQA ELAHRLQSL EI+AFLNPCDGV EDA +S+ GD 
Sbjct: 67  VANLDMTAQNYAAVETVNSILRAQAVELAHRLQSLTEILAFLNPCDGV-EDACNSYNGD- 126

Query: 123 GGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFEEY 174
            GGA  SG+FCADPI +GGGGGGG  FF PL+M F  SQPLMASADVFEEY
Sbjct: 127 -GGADGSGFFCADPIDIGGGGGGGDGFFTPLKMGFCRSQPLMASADVFEEY 174

[Close]

BLAST of Lag0009198 vs. NCBI nr
Match: KAG6605064.1 (bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-58
Identity = 131/171 (76.61%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 3   SSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQI 62
           +SSTCSSMEEGE  ALMEQRKRKRM+SNR+SARRSRMRKQKHL+DL+ MV +L +E QQI
Sbjct: 7   TSSTCSSMEEGEFVALMEQRKRKRMISNRESARRSRMRKQKHLEDLITMVRKLSEEKQQI 66

Query: 63  VANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 122
           VANL +TAQ+YAAVE+ NSILRAQA ELAHRLQSL EI+AFLNPCDGV  DA +S+ GD 
Sbjct: 67  VANLDMTAQNYAAVETVNSILRAQAVELAHRLQSLTEILAFLNPCDGVY-DACNSYNGD- 126

Query: 123 GGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFEEY 174
            GGAG SG+FCADPI +GGGGGGG  FFNPL+M F  SQP+MASADVFEEY
Sbjct: 127 -GGAGGSGFFCADPIDIGGGGGGGDGFFNPLKMGFCRSQPVMASADVFEEY 174

[Close]

BLAST of Lag0009198 vs. NCBI nr
Match: KAG7035074.1 (bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 5.0e-58
Identity = 132/172 (76.74%), Postives = 149/172 (86.63%), Query Frame = 0


Query: 3   SSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQI 62
           +SSTCSSMEEGE  ALMEQRKRKRM+SNR+SARRSRMRKQKHL+DL+ MV +L +E QQI
Sbjct: 7   TSSTCSSMEEGEFVALMEQRKRKRMISNRESARRSRMRKQKHLEDLITMVRKLSEEKQQI 66

Query: 63  VANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 122
           VANL +TAQ+YAAVE+ NSILRAQA ELAHRLQSL EI+AFLNPCDGV  DA +S+ GD 
Sbjct: 67  VANLDMTAQNYAAVETVNSILRAQAVELAHRLQSLTEILAFLNPCDGVY-DACNSYNGD- 126

Query: 123 GGGAGNSGYFCADPIQVGGGGGGGG-VFFNPLQMAFYMSQPLMASADVFEEY 174
            GGAG SG+FCADPI +GGGGGGGG  FFNPL+M F  SQP+MASADVFEEY
Sbjct: 127 -GGAGGSGFFCADPIDIGGGGGGGGDGFFNPLKMGFCRSQPVMASADVFEEY 175

[Close]

BLAST of Lag0009198 vs. NCBI nr
Match: XP_022947249.1 (bZIP transcription factor 11-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-56
Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 3   SSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQI 62
           +SSTCSSMEEGE  ALMEQRKRKRM+SNR+SARRSRMRKQKHL+DL+ MV +L +E QQI
Sbjct: 7   TSSTCSSMEEGEFVALMEQRKRKRMISNRESARRSRMRKQKHLEDLITMVRKLSEEKQQI 66

Query: 63  VANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 122
           VANL +TAQ+YAAVE+ NSILRAQA ELAHRLQSL EI+AFLNPCDGV  DA +S+ GD 
Sbjct: 67  VANLDMTAQNYAAVETVNSILRAQAVELAHRLQSLTEILAFLNPCDGVY-DACNSYNGD- 126

Query: 123 GGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFEEY 174
            GGAG SG+FCADPI +GGGG G   FFNPL+M F  SQP+MASADVFEEY
Sbjct: 127 -GGAGGSGFFCADPIDIGGGGDG---FFNPLKMGFCRSQPVMASADVFEEY 171

[Close]

BLAST of Lag0009198 vs. NCBI nr
Match: XP_023006909.1 (bZIP transcription factor 11-like [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-55
Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 3   SSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQI 62
           +SSTCSSMEEGELAA+MEQRKRKRM+SNR+SARRSRMRKQKHL+DL+ MV QL +E QQI
Sbjct: 7   TSSTCSSMEEGELAAMMEQRKRKRMISNRESARRSRMRKQKHLEDLITMVRQLSEEKQQI 66

Query: 63  VANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 122
           VANL +TAQ+YAA+E+ NSILRAQA ELAHRLQSL EI+AFLNPCDGV EDA +S+ GD 
Sbjct: 67  VANLDMTAQNYAAMETVNSILRAQAVELAHRLQSLTEILAFLNPCDGV-EDACNSYNGD- 126

Query: 123 GGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFEEY 174
            G AG  G+FCADPI+VGGGG G   FFNPL+M    SQPLMASA VFEEY
Sbjct: 127 -GVAGGGGFFCADPIEVGGGGDG---FFNPLKMGLCRSQPLMASAHVFEEY 171

[Close]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 90/184 (48.91%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 2   ASSSTCSSMEEGELA-----------ALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMA 61
           ++S  CSS+    LA            L+++RKRKR  SNR+SARRSRMRKQKHLDDL A
Sbjct: 10  STSGNCSSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTA 69

Query: 62  MVAQLRKENQQIVANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGV 121
            V  LRKEN QIVA + VT QHY  +E+EN ILRAQ  EL HRLQSL EIV F       
Sbjct: 70  QVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDF------- 129

Query: 122 LEDASDSFGGDDGGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASA--- 171
           +E +S  FG + G G  + G F              GV  NP+ + FY +QP+MASA   
Sbjct: 130 VESSSSGFGMETGQGLFDGGLF-------------DGV-MNPMNLGFY-NQPIMASASTA 171

[Close]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.9e-26
Identity = 83/170 (48.82%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 2   ASSSTCSS---MEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKE 61
           +SS T SS      G   +LMEQRKRKRMLSNR+SARRSRM+KQK LDDL A V  L+KE
Sbjct: 4   SSSGTTSSTIQTSSGSEESLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKE 63

Query: 62  NQQIVANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSF 121
           N +IV ++ +T QHY  VE+ENS+LRAQ  EL HRLQSL +I+ FL           DS 
Sbjct: 64  NTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFL-----------DSS 123

Query: 122 GGDDGGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMASAD 169
             ++    G     C++P+    G      F N + M++ M+QPLMAS+D
Sbjct: 124 NNNNNNNMG----MCSNPLV---GLECDDFFVNQMNMSYIMNQPLMASSD 155

[Close]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.0e-18
Identity = 72/166 (43.37%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 2   ASSSTCSSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQ 61
           +SSS   +    +    +++RKRKRMLSNR+SARRSRMRKQKH+DDL A + QL  +N+Q
Sbjct: 11  SSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQ 70

Query: 62  IVANLGVTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCD-GVLEDASDSFGG 121
           I+ +L VT+Q Y  +++ENS+L AQ  EL+ RLQSL EIV  +     G   D  D  G 
Sbjct: 71  ILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAGFGVDQIDGCGF 130

Query: 122 DDGGGAGNSGYFCADPIQVGGGGGGGGVFFNPLQMAFYMSQPLMAS 167
           DD    G  GY+    +       GG V         Y +QP+MA+
Sbjct: 131 DD-RTVGIDGYYDDMNMMSNVNHWGGSV---------YTNQPIMAN 166

[Close]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-15
Identity = 51/115 (44.35%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 8   SSMEEGELAALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQIVANLG 67
           +S  +G+ AA    R+ KR LSNR+SARRSR+RKQ+HLD+L+  VA+L+ +N ++ A   
Sbjct: 13  TSGSDGDSAA-DTHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNARVAARAR 72

Query: 68  VTAQHYAAVESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDD 123
             A  Y  VE EN++LRA+AAEL  RL+S+ E++  +    GV  D  +    DD
Sbjct: 73  DIASQYTRVEQENTVLRARAAELGDRLRSVNEVLRLVEEFSGVAMDIQEEMPADD 126

[Close]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.3e-15
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 16  AALMEQRKRKRMLSNRDSARRSRMRKQKHLDDLMAMVAQLRKENQQIVANLGVTAQHYAA 75
           A + ++RKRKRM+SNR+SARRSRMRKQK L DL+  V  L+ +N +I   +   ++ Y  
Sbjct: 19  ATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIE 78

Query: 76  VESENSILRAQAAELAHRLQSLMEIVAFLNPCDGVLEDASDSFGGDDGGGAGNSGYFCAD 135
           +ES+N++LRAQA+EL  RL+SL  ++  +    G   D  +                  +
Sbjct: 79  MESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPE----------------IPE 138

Query: 136 PIQVGGGGGGGGVFFNPLQMAFYMSQPLMASADVFE 172
            +Q            NP QM   M QP+ ASAD+F+
Sbjct: 139 SMQ------------NPWQMPCPM-QPIRASADMFD 145

The following BLAST results are available for this feature:

BLAST of Lag0009198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534790.1	1.0e-58	77.19	bZIP transcription factor 11-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605064.1	1.3e-58	76.61	bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035074.1	5.0e-58	76.74	bZIP transcription factor 44, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022947249.1	3.6e-56	75.44	bZIP transcription factor 11-like [Cucurbita moschata]	[more]
XP_023006909.1	2.3e-55	75.44	bZIP transcription factor 11-like [Cucurbita maxima]	[more]

BLAST of Lag0009198 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0Z2L5	1.4e-26	48.91	bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1	[more]
O65683	6.9e-26	48.82	bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1	[more]
Q9SI15	9.0e-18	43.37	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]
P24068	7.1e-15	44.35	Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2	[more]
Q9LZP8	9.3e-15	37.18	bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..65
None	No IPR available	GENE3D	1.20.5.170		coord: 20..68 e-value: 1.3E-11 score: 46.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..42
None	No IPR available	PANTHER	PTHR45764	BZIP TRANSCRIPTION FACTOR 44	coord: 5..169
None	No IPR available	PANTHER	PTHR45764:SF38	BZIP TRANSCRIPTION FACTOR	coord: 5..169
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 23..74 e-value: 3.34708E-19 score: 74.4925
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 22..73
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 18..82 e-value: 3.0E-16 score: 70.0
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 21..80 e-value: 1.4E-9 score: 37.9
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 25..40
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 20..83 score: 10.03608

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009198.1	Lag0009198.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009744	response to sucrose
biological_process	GO:0080149	sucrose induced translational repression
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding