Lag0008071 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTGACGATTTGATGGAAAATTGGGAGAAATTTAATCTTACAGCTGAAGAGGAGGATATGGAAGGGGATGTTGATCGAAATGTTGTTGCTGTTACGAGCCGATCTTTGGGATTTAGTCTCATTGGTAAGCTTATTGCGCCTCGTGTTATTTCTGGTGAGGTAATGAGGAAAAATTTCAAGGCTGCCTGGAATATCCCAACGGGTCTGACCGTCGAGAAGCTGGGGCTTAATTTATTTCTATTTACGTTGCTGACAGAGGAGGAACAAACCAAAGTTCTTCGACAAGAACCATGGTTGTTTGACAAGTTCATTCTGATGTTATCCAAACCGATTCCAATGGTTAAACCTCAAGCAACGGAATTCATGCTGGTGAATTTCTGGTTACACTTCTATGAACTTCCTATGGACCTTTACAATTCATCCATGGCGGAAAGGCTCGCGAACGCTGTGGGTAAGTTTGTTGATTACGACAATGGGGGTAGGAGGAGACACGGATGGAAGGAGAGCCTCCGAATTCGAGTGCAGCTGGATATATCAAAACCCCTTCGATGGGGCGTTAAGGTGAAGCTTGACGAACCGATGGGAAGTTGCTGGTCTCTGATTCGGTATGAAAAATTATCGGAATTATGCTCTTTCTGCAGTATAATTGGCCACATTGCCCAGAATTGTAATTCTTTTATTATGGGCGGGAGTTCATCATCACAACGACATCAATATGGCATGTGGTTACAGTATATTGGGTGCACTAACAATTTCTTCCCTTCTCCGAGCACAAGTCCGCTGGGACAGAATAAAATTATGTTTGAGCCTCAACCAGGAGACAATTCTCCTCAGGCAGCGATCGTGGGTGCGATTGGCCAGAGTTTAGCAGGGGATTCTTTGAAGCAAGATTCCGGCACCAAACCGATGGATATTTCACCGATGATGGATGAAGCGATTACTTTTCCTCTTCCGGCGGCAATACAGGGCAGCGATAATGGCATTAATGGTGGATTAAATGCAGAGGTTTCAACGGTGAAGAAGAAGCTGTGTTTCGGAGATGTTACGAAAGTTTTGCCTAAATCACTGGATTCAACGGCCCAAACTCAAGATTTTATTCCTTTAACAATTAATGTGGAAAATGGGCCTAAGGGGGATATGCTCGGTGCGGACCTGTCTACCAAGAATGGGCCAACAAGAGTTGGGCTACCTGAGGAATCAAAGAATCTGAATAGACCTGGAGTGTACTCCCTTAGTGGTTTCTCAGTCAAAGAAGAAAGCAAGAGGAGCAATGTCTACAAGTGGAATTTCAATTCCATGACCCCTCAAATGGGTCCATTTACATCGGCCAGTAAGGCTGGATCTGGTATAAATGGACCAGCCCAATCAGACCTTGGCGTGAATGATCAAAGTTCGGTGCTGAATCTGACCCTGAAGCAAGTGGTGATGGGTCTTCCTAATTCCAAGTCCAGGAAACGAAGGGCTCATTTTGATATTTTTGAAGCGGGCATCAATTCTAGTCTGGAAGTTTTTAAGAAGCGAGTGGGAGATCGTCTTGATGGTGGTAACAAGAAACGGCCTAGGGTGGAAGATGAGGATGATGCAAACCATGATGAAGCATCGGCGGAGGCTGGTAATCAGCCCCGTCGGAAGCCATGA ATGGCTCTTGACGATTTGATGGAAAATTGGGAGAAATTTAATCTTACAGCTGAAGAGGAGGATATGGAAGGGGATGTTGATCGAAATGTTGTTGCTGTTACGAGCCGATCTTTGGGATTTAGTCTCATTGGTAAGCTTATTGCGCCTCGTGTTATTTCTGGTGAGGTAATGAGGAAAAATTTCAAGGCTGCCTGGAATATCCCAACGGGTCTGACCGTCGAGAAGCTGGGGCTTAATTTATTTCTATTTACGTTGCTGACAGAGGAGGAACAAACCAAAGTTCTTCGACAAGAACCATGGTTGTTTGACAAGTTCATTCTGATGTTATCCAAACCGATTCCAATGGTTAAACCTCAAGCAACGGAATTCATGCTGGTGAATTTCTGGTTACACTTCTATGAACTTCCTATGGACCTTTACAATTCATCCATGGCGGAAAGGCTCGCGAACGCTGTGGGTAAGTTTGTTGATTACGACAATGGGGGTAGGAGGAGACACGGATGGAAGGAGAGCCTCCGAATTCGAGTGCAGCTGGATATATCAAAACCCCTTCGATGGGGCGTTAAGGTGAAGCTTGACGAACCGATGGGAAGTTGCTGGTCTCTGATTCGGTATGAAAAATTATCGGAATTATGCTCTTTCTGCAGTATAATTGGCCACATTGCCCAGAATTGTAATTCTTTTATTATGGGCGGGAGTTCATCATCACAACGACATCAATATGGCATGTGGTTACAGTATATTGGGTGCACTAACAATTTCTTCCCTTCTCCGAGCACAAGTCCGCTGGGACAGAATAAAATTATGTTTGAGCCTCAACCAGGAGACAATTCTCCTCAGGCAGCGATCGTGGGTGCGATTGGCCAGAGTTTAGCAGGGGATTCTTTGAAGCAAGATTCCGGCACCAAACCGATGGATATTTCACCGATGATGGATGAAGCGATTACTTTTCCTCTTCCGGCGGCAATACAGGGCAGCGATAATGGCATTAATGGTGGATTAAATGCAGAGGTTTCAACGGTGAAGAAGAAGCTGTGTTTCGGAGATGTTACGAAAGTTTTGCCTAAATCACTGGATTCAACGGCCCAAACTCAAGATTTTATTCCTTTAACAATTAATGTGGAAAATGGGCCTAAGGGGGATATGCTCGGTGCGGACCTGTCTACCAAGAATGGGCCAACAAGAGTTGGGCTACCTGAGGAATCAAAGAATCTGAATAGACCTGGAGTGTACTCCCTTAGTGGTTTCTCAGTCAAAGAAGAAAGCAAGAGGAGCAATGTCTACAAGTGGAATTTCAATTCCATGACCCCTCAAATGGGTCCATTTACATCGGCCAGTAAGGCTGGATCTGGTATAAATGGACCAGCCCAATCAGACCTTGGCGTGAATGATCAAAGTTCGGTGCTGAATCTGACCCTGAAGCAAGTGGTGATGGGTCTTCCTAATTCCAAGTCCAGGAAACGAAGGGCTCATTTTGATATTTTTGAAGCGGGCATCAATTCTAGTCTGGAAGTTTTTAAGAAGCGAGTGGGAGATCGTCTTGATGGTGGTAACAAGAAACGGCCTAGGGTGGAAGATGAGGATGATGCAAACCATGATGAAGCATCGGCGGAGGCTGGTAATCAGCCCCGTCGGAAGCCATGA ATGGCTCTTGACGATTTGATGGAAAATTGGGAGAAATTTAATCTTACAGCTGAAGAGGAGGATATGGAAGGGGATGTTGATCGAAATGTTGTTGCTGTTACGAGCCGATCTTTGGGATTTAGTCTCATTGGTAAGCTTATTGCGCCTCGTGTTATTTCTGGTGAGGTAATGAGGAAAAATTTCAAGGCTGCCTGGAATATCCCAACGGGTCTGACCGTCGAGAAGCTGGGGCTTAATTTATTTCTATTTACGTTGCTGACAGAGGAGGAACAAACCAAAGTTCTTCGACAAGAACCATGGTTGTTTGACAAGTTCATTCTGATGTTATCCAAACCGATTCCAATGGTTAAACCTCAAGCAACGGAATTCATGCTGGTGAATTTCTGGTTACACTTCTATGAACTTCCTATGGACCTTTACAATTCATCCATGGCGGAAAGGCTCGCGAACGCTGTGGGTAAGTTTGTTGATTACGACAATGGGGGTAGGAGGAGACACGGATGGAAGGAGAGCCTCCGAATTCGAGTGCAGCTGGATATATCAAAACCCCTTCGATGGGGCGTTAAGGTGAAGCTTGACGAACCGATGGGAAGTTGCTGGTCTCTGATTCGGTATGAAAAATTATCGGAATTATGCTCTTTCTGCAGTATAATTGGCCACATTGCCCAGAATTGTAATTCTTTTATTATGGGCGGGAGTTCATCATCACAACGACATCAATATGGCATGTGGTTACAGTATATTGGGTGCACTAACAATTTCTTCCCTTCTCCGAGCACAAGTCCGCTGGGACAGAATAAAATTATGTTTGAGCCTCAACCAGGAGACAATTCTCCTCAGGCAGCGATCGTGGGTGCGATTGGCCAGAGTTTAGCAGGGGATTCTTTGAAGCAAGATTCCGGCACCAAACCGATGGATATTTCACCGATGATGGATGAAGCGATTACTTTTCCTCTTCCGGCGGCAATACAGGGCAGCGATAATGGCATTAATGGTGGATTAAATGCAGAGGTTTCAACGGTGAAGAAGAAGCTGTGTTTCGGAGATGTTACGAAAGTTTTGCCTAAATCACTGGATTCAACGGCCCAAACTCAAGATTTTATTCCTTTAACAATTAATGTGGAAAATGGGCCTAAGGGGGATATGCTCGGTGCGGACCTGTCTACCAAGAATGGGCCAACAAGAGTTGGGCTACCTGAGGAATCAAAGAATCTGAATAGACCTGGAGTGTACTCCCTTAGTGGTTTCTCAGTCAAAGAAGAAAGCAAGAGGAGCAATGTCTACAAGTGGAATTTCAATTCCATGACCCCTCAAATGGGTCCATTTACATCGGCCAGTAAGGCTGGATCTGGTATAAATGGACCAGCCCAATCAGACCTTGGCGTGAATGATCAAAGTTCGGTGCTGAATCTGACCCTGAAGCAAGTGGTGATGGGTCTTCCTAATTCCAAGTCCAGGAAACGAAGGGCTCATTTTGATATTTTTGAAGCGGGCATCAATTCTAGTCTGGAAGTTTTTAAGAAGCGAGTGGGAGATCGTCTTGATGGTGGTAACAAGAAACGGCCTAGGGTGGAAGATGAGGATGATGCAAACCATGATGAAGCATCGGCGGAGGCTGGTAATCAGCCCCGTCGGAAGCCATGA MALDDLMENWEKFNLTAEEEDMEGDVDRNVVAVTSRSLGFSLIGKLIAPRVISGEVMRKNFKAAWNIPTGLTVEKLGLNLFLFTLLTEEEQTKVLRQEPWLFDKFILMLSKPIPMVKPQATEFMLVNFWLHFYELPMDLYNSSMAERLANAVGKFVDYDNGGRRRHGWKESLRIRVQLDISKPLRWGVKVKLDEPMGSCWSLIRYEKLSELCSFCSIIGHIAQNCNSFIMGGSSSSQRHQYGMWLQYIGCTNNFFPSPSTSPLGQNKIMFEPQPGDNSPQAAIVGAIGQSLAGDSLKQDSGTKPMDISPMMDEAITFPLPAAIQGSDNGINGGLNAEVSTVKKKLCFGDVTKVLPKSLDSTAQTQDFIPLTINVENGPKGDMLGADLSTKNGPTRVGLPEESKNLNRPGVYSLSGFSVKEESKRSNVYKWNFNSMTPQMGPFTSASKAGSGINGPAQSDLGVNDQSSVLNLTLKQVVMGLPNSKSRKRRAHFDIFEAGINSSLEVFKKRVGDRLDGGNKKRPRVEDEDDANHDEASAEAGNQPRRKP Homology
BLAST of Lag0008071 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 224.2 bits (570), Expect = 2.8e-54 Identity = 104/247 (42.11%), Postives = 157/247 (63.56%), Query Frame = 0
BLAST of Lag0008071 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 190.3 bits (482), Expect = 4.5e-44 Identity = 92/254 (36.22%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of Lag0008071 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 186.4 bits (472), Expect = 6.5e-43 Identity = 105/284 (36.97%), Postives = 150/284 (52.82%), Query Frame = 0
BLAST of Lag0008071 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis]) HSP 1 Score: 142.1 bits (357), Expect = 1.4e-29 Identity = 85/248 (34.27%), Postives = 130/248 (52.42%), Query Frame = 0
BLAST of Lag0008071 vs. NCBI nr
Match: XP_021757945.1 (uncharacterized protein LOC110722981 [Chenopodium quinoa]) HSP 1 Score: 141.7 bits (356), Expect = 1.8e-29 Identity = 75/245 (30.61%), Postives = 127/245 (51.84%), Query Frame = 0
BLAST of Lag0008071 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.4e-54 Identity = 104/247 (42.11%), Postives = 157/247 (63.56%), Query Frame = 0
BLAST of Lag0008071 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-44 Identity = 92/254 (36.22%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of Lag0008071 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.1e-43 Identity = 105/284 (36.97%), Postives = 150/284 (52.82%), Query Frame = 0
BLAST of Lag0008071 vs. ExPASy TrEMBL
Match: A0A803M2M9 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.9e-28 Identity = 71/243 (29.22%), Postives = 133/243 (54.73%), Query Frame = 0
BLAST of Lag0008071 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.1e-27 Identity = 73/245 (29.80%), Postives = 127/245 (51.84%), Query Frame = 0
BLAST of Lag0008071 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 8.5e-09 Identity = 38/140 (27.14%), Postives = 66/140 (47.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|