Lag0007722 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007722
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr9: 3747088 .. 3748768 (-)
RNA-Seq ExpressionLag0007722
SyntenyLag0007722
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTCTGTTTTATCTCTGAAGCGGTGGACGAAGGCCGCCTATGTGCTGAAAGGGCAGCTTGTCTGCTTGCGGCGGAATTTTTTCGGTAGATTTTCTAGTTGTTTTCTGACGACGATGGCGACACAAGATGCTGCCGACTCCATTATAAAGCAATTGGGTGAACTGAAAGTGACAGATGCAAAAAGAGCTTGCATGTATAAGTTGCAAGAGGATGCAACTGACAAGACAAAACATCAACTGGAGAATGCAATACTTTGTAAAATTTTCACAAACAGGAAGATTAGTCTAGAAGTTTTTTGTTCCATGATGCCAAAGATATGGAATCAAGAGCATACAATAATCCACCATATGGGTTTTAACTTGTTCTTATGCAAATTTTGGAATACTCGGATTAAAGGAAGAATCATTGATTTTGGACCTTGGTTTTACGACAAAGCAATGCTTCTAATGGAAGAACCAAAAGGAGATATCTACGATGAAGATATGGACTTCAAGTACGTTTCCTTTTGGGTTCGTTTTCATAAATTACCATATGCTTTTTTTTAGGGAATTGGTTGTGGCAATTGGAAGTCTTCTAGGAAAAGTTGAACAAGTAGATCTTGATGAGGATAACAATAAACAATGGGAATTCTCCCTTAGAATAAAGATTCAAATTGATGTCTCCGTCCCTTTGAAACGTGGAATTTTCTTGCAATCGAGTAAGGGTGATAATGATAGATGGATCAAAGTTACATATGAAAAATTACTTGATTTTTGCTATGGGTGTGGATTACTGGGGCATATAATAAAAGAATGTGAGGTCAATTATGGGTCAAATAATGAGGAGTTGTCCTATGGTCCTTCGTTACGGAAACCAGTAAAACTAAAAACTCATGAATTCACTCATGGATCAACCTCCACCATGTTTGGAAGAGGGAGAGGGAGGGGTGCAGATGGTGGAAGAGGAAGCTGGAGGTATACAGTAGCTGAAGAGGTGGAAAAGGAACAAGAAGGTACCAACAGTCGGTTCCAGGCTGCAAAAGAAGCTGGTCAGCAGGAAATTGGTCAAAGCTCACGACCGGAATCTGACCGGCCGGAAGTTGCCTCTCTGGTGAGAAAGCTAACGGCTGGAAAATGTAATAAGAAATGCGCGGAAAATCAGGAGCAGTTAATTAGAAACGACGAAAATAAAGGGGAAGGCGCAAAAATTGGGTCCAACGGTAATATTAAAGGGCTGTCCACAATAAACACAGATTCGGATCTCCCATTAATGGATATTGACAAGAATTGGGCTGGGCATTATGAAGATATGGACAACCAACATAGGGAAATAAATTCAGTTTTAAATAATACTCGTTCCATATCTTCCAAACAAGAAATCTCTGCAGAAATTCATGGTGTGACAGAAGCTAGTCTGGATTCCACAAATCTAGTGAAGGGAAATAAGCTTTTAAAGGAAGAAAGTGGAAAAAAGAATTTGAAAGGAAACATTACAACTTGGAAGAGGATAGCCAGAATGATAGAACCAGAGGGGACGTGTGATAAGCAGCAACCTTTGATGGGAAGTGTAGTTGGACAGAAACATAATATTGACTTTGATGAGGTAGAGCAGGCTAAACAGAAGGTGTTGATTATTGGTGGTCAAAACAATGCAATATCGGTGGAGGCTGCTGGACAGCCCCGCCGAGCACAATTGTAA

mRNA sequence

ATGGTCTCTGTTTTATCTCTGAAGCGGTGGACGAAGGCCGCCTATGTGCTGAAAGGGCAGCTTGTCTGCTTGCGGCGGAATTTTTTCGGTAGATTTTCTAGTTGTTTTCTGACGACGATGGCGACACAAGATGCTGCCGACTCCATTATAAAGCAATTGGGTGAACTGAAAGTGACAGATGCAAAAAGAGCTTGCATGTATAAGTTGCAAGAGGATGCAACTGACAAGACAAAACATCAACTGGAGAATGCAATACTTTGTAAAATTTTCACAAACAGGAAGATTAGTCTAGAAGTTTTTTGTTCCATGATGCCAAAGATATGGAATCAAGAGCATACAATAATCCACCATATGGGTTTTAACTTGTTCTTATGCAAATTTTGGAATACTCGGATTAAAGGAAGAATCATTGATTTTGGACCTTGGTTTTACGACAAAGCAATGCTTCTAATGGAAGAACCAAAAGGAGATATCTACGATGAAGATATGGACTTCAAGGAATTGGTTGTGGCAATTGGAAGTCTTCTAGGAAAAGTTGAACAAGTAGATCTTGATGAGGATAACAATAAACAATGGGAATTCTCCCTTAGAATAAAGATTCAAATTGATGTCTCCGTCCCTTTGAAACGTGGAATTTTCTTGCAATCGAGTAAGGGTGATAATGATAGATGGATCAAAGTTACATATGAAAAATTACTTGATTTTTGCTATGGGTGTGGATTACTGGGGCATATAATAAAAGAATGTGAGGTCAATTATGGGTCAAATAATGAGGAGTTGTCCTATGGTCCTTCGTTACGGAAACCAGTAAAACTAAAAACTCATGAATTCACTCATGGATCAACCTCCACCATGTTTGGAAGAGGGAGAGGGAGGGGTGCAGATGGTGGAAGAGGAAGCTGGAGGTATACAGTAGCTGAAGAGGTGGAAAAGGAACAAGAAGGTACCAACAGTCGGTTCCAGGCTGCAAAAGAAGCTGGTCAGCAGGAAATTGGTCAAAGCTCACGACCGGAATCTGACCGGCCGGAAGTTGCCTCTCTGGTGAGAAAGCTAACGGCTGGAAAATGTAATAAGAAATGCGCGGAAAATCAGGAGCAGTTAATTAGAAACGACGAAAATAAAGGGGAAGGCGCAAAAATTGGGTCCAACGGTAATATTAAAGGGCTGTCCACAATAAACACAGATTCGGATCTCCCATTAATGGATATTGACAAGAATTGGGCTGGGCATTATGAAGATATGGACAACCAACATAGGGAAATAAATTCAGTTTTAAATAATACTCGTTCCATATCTTCCAAACAAGAAATCTCTGCAGAAATTCATGGTGTGACAGAAGCTAGTCTGGATTCCACAAATCTAGTGAAGGGAAATAAGCTTTTAAAGGAAGAAAGTGGAAAAAAGAATTTGAAAGGAAACATTACAACTTGGAAGAGGATAGCCAGAATGATAGAACCAGAGGGGACGTGTGATAAGCAGCAACCTTTGATGGGAAGTGTAGTTGGACAGAAACATAATATTGACTTTGATGAGGTAGAGCAGGCTAAACAGAAGGTGTTGATTATTGGTGGTCAAAACAATGCAATATCGGTGGAGGCTGCTGGACAGCCCCGCCGAGCACAATTGTAA

Coding sequence (CDS)

ATGGTCTCTGTTTTATCTCTGAAGCGGTGGACGAAGGCCGCCTATGTGCTGAAAGGGCAGCTTGTCTGCTTGCGGCGGAATTTTTTCGGTAGATTTTCTAGTTGTTTTCTGACGACGATGGCGACACAAGATGCTGCCGACTCCATTATAAAGCAATTGGGTGAACTGAAAGTGACAGATGCAAAAAGAGCTTGCATGTATAAGTTGCAAGAGGATGCAACTGACAAGACAAAACATCAACTGGAGAATGCAATACTTTGTAAAATTTTCACAAACAGGAAGATTAGTCTAGAAGTTTTTTGTTCCATGATGCCAAAGATATGGAATCAAGAGCATACAATAATCCACCATATGGGTTTTAACTTGTTCTTATGCAAATTTTGGAATACTCGGATTAAAGGAAGAATCATTGATTTTGGACCTTGGTTTTACGACAAAGCAATGCTTCTAATGGAAGAACCAAAAGGAGATATCTACGATGAAGATATGGACTTCAAGGAATTGGTTGTGGCAATTGGAAGTCTTCTAGGAAAAGTTGAACAAGTAGATCTTGATGAGGATAACAATAAACAATGGGAATTCTCCCTTAGAATAAAGATTCAAATTGATGTCTCCGTCCCTTTGAAACGTGGAATTTTCTTGCAATCGAGTAAGGGTGATAATGATAGATGGATCAAAGTTACATATGAAAAATTACTTGATTTTTGCTATGGGTGTGGATTACTGGGGCATATAATAAAAGAATGTGAGGTCAATTATGGGTCAAATAATGAGGAGTTGTCCTATGGTCCTTCGTTACGGAAACCAGTAAAACTAAAAACTCATGAATTCACTCATGGATCAACCTCCACCATGTTTGGAAGAGGGAGAGGGAGGGGTGCAGATGGTGGAAGAGGAAGCTGGAGGTATACAGTAGCTGAAGAGGTGGAAAAGGAACAAGAAGGTACCAACAGTCGGTTCCAGGCTGCAAAAGAAGCTGGTCAGCAGGAAATTGGTCAAAGCTCACGACCGGAATCTGACCGGCCGGAAGTTGCCTCTCTGGTGAGAAAGCTAACGGCTGGAAAATGTAATAAGAAATGCGCGGAAAATCAGGAGCAGTTAATTAGAAACGACGAAAATAAAGGGGAAGGCGCAAAAATTGGGTCCAACGGTAATATTAAAGGGCTGTCCACAATAAACACAGATTCGGATCTCCCATTAATGGATATTGACAAGAATTGGGCTGGGCATTATGAAGATATGGACAACCAACATAGGGAAATAAATTCAGTTTTAAATAATACTCGTTCCATATCTTCCAAACAAGAAATCTCTGCAGAAATTCATGGTGTGACAGAAGCTAGTCTGGATTCCACAAATCTAGTGAAGGGAAATAAGCTTTTAAAGGAAGAAAGTGGAAAAAAGAATTTGAAAGGAAACATTACAACTTGGAAGAGGATAGCCAGAATGATAGAACCAGAGGGGACGTGTGATAAGCAGCAACCTTTGATGGGAAGTGTAGTTGGACAGAAACATAATATTGACTTTGATGAGGTAGAGCAGGCTAAACAGAAGGTGTTGATTATTGGTGGTCAAAACAATGCAATATCGGTGGAGGCTGCTGGACAGCCCCGCCGAGCACAATTGTAA

Protein sequence

MVSVLSLKRWTKAAYVLKGQLVCLRRNFFGRFSSCFLTTMATQDAADSIIKQLGELKVTDAKRACMYKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMMPKIWNQEHTIIHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDEDMDFKELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSNNEELSYGPSLRKPVKLKTHEFTHGSTSTMFGRGRGRGADGGRGSWRYTVAEEVEKEQEGTNSRFQAAKEAGQQEIGQSSRPESDRPEVASLVRKLTAGKCNKKCAENQEQLIRNDENKGEGAKIGSNGNIKGLSTINTDSDLPLMDIDKNWAGHYEDMDNQHREINSVLNNTRSISSKQEISAEIHGVTEASLDSTNLVKGNKLLKEESGKKNLKGNITTWKRIARMIEPEGTCDKQQPLMGSVVGQKHNIDFDEVEQAKQKVLIIGGQNNAISVEAAGQPRRAQL
Homology
BLAST of Lag0007722 vs. NCBI nr
Match: XP_021713609.1 (uncharacterized protein LOC110681792 [Chenopodium quinoa])

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-25
Identity = 75/246 (30.49%), Postives = 130/246 (52.85%), Query Frame = 0

Query: 47  DSIIKQLGELKVTDAKRACM-YKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMMP 106
           D ++K   +L++T+ +   +  +  E  T+ TK QL   ++ K++T +  +LE     + 
Sbjct: 3   DDLVKDWEKLRLTEDEGVVLGGEYIETVTEDTKAQLNLTLMGKLWTVKPYNLEAMKRTLM 62

Query: 107 KIWN-QEHTIIHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDEDMD 166
            +W  +E   +  +  NLF  +F+    K R+++  PWF+D+ +LL++E  G+    ++ 
Sbjct: 63  NVWRLKEKFAVRVVETNLFAFQFFCEEDKARVLEGRPWFFDEKLLLLQEVYGEEQPSEIC 122

Query: 167 FKELVV------------AIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDVSVPLKRGI 226
           FK   +            +I  +    E ++LDE +   W  S+RIK+ +D++ PL+RG+
Sbjct: 123 FKNTPMWVRLMDVPLNKRSISVMYDIGEFIELDESDPLGWSESMRIKVLVDINKPLRRGL 182

Query: 227 FLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSNNEE----LSYGPSLRK 275
           FL + + ++ RWI V YE+L DFC+ CG L H  KEC+    +   E      YGP LR 
Sbjct: 183 FLATDQ-NSSRWIDVKYERLADFCFFCGRLDHTEKECQHKEQAKGSEPMMVYQYGPWLRA 242

BLAST of Lag0007722 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 126.3 bits (316), Expect = 7.9e-25
Identity = 67/202 (33.17%), Postives = 111/202 (54.95%), Query Frame = 0

Query: 81  LENAILCKIFTNRKISLEVFCSMMPKIWNQEHTI-IHHMGFNLFLCKFWNTRIKGRIIDF 140
           L   ++ K+   R ++ E F S + ++W     + I  +G N F+ KF     K R++  
Sbjct: 15  LARCLVGKVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRVLTG 74

Query: 141 GPWFYDKAMLLMEEPKGDIYDEDMDF------------------KELVVAIGSLLGKVEQ 200
           GPW +D+A+L++ EPKG        F                  KEL+  +G ++G VE+
Sbjct: 75  GPWHFDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGAVEE 134

Query: 201 VDLDEDNNKQWEFSLRIKIQIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGL 260
           ++ DE+     EF+ RI++ I++++PLK+ +FL+  +G++D  + V YE+L DFCY CG+
Sbjct: 135 IETDENGECLGEFA-RIRVLINITLPLKKILFLK-QEGESDIQMPVVYERLPDFCYCCGI 194

Query: 261 LGHIIKECEVNYGSNNEELSYG 264
           +GH  KEC    G   E+L YG
Sbjct: 195 IGHQYKECAKFQGQQKEQLPYG 214

BLAST of Lag0007722 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 5.1e-24
Identity = 92/318 (28.93%), Postives = 150/318 (47.17%), Query Frame = 0

Query: 77  TKHQLENAILCKIFTNRKISLEVFCSMMPKIWN-QEHTIIHHMGFNLFLCKFWNTRIKGR 136
           T   ++  ++ K+ T+++IS E   S+M  +W     T    +G N+++  F +   K R
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 137 IIDFGPWFYDKAMLLMEEPKGDIYDEDMDFK------------------ELVVAIGSLLG 196
           ++  GPW ++K++L++  P       DM+F                   E+   +G+ LG
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 197 KVEQVDLDEDNNKQWEFSLRIKIQIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCY 256
            VE+++ D  +     F +R++++IDVS PL+RGI L++S G  D W  + YEKL DFCY
Sbjct: 151 DVEEIEGDGADGWAGPF-IRVRVKIDVSKPLRRGIKLKNSDG-KDIWCPLRYEKLPDFCY 210

Query: 257 GCGLLGHIIKECE--VNYGSNNEELSYGPSLRKPVKLKTHEFTHGSTSTMFGR-GRG--- 316
            CG +GH  +ECE      + N    YG  LR  +  K+            GR GRG   
Sbjct: 211 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQV 270

Query: 317 RGADGGRGSWRYTVAEEVEKEQEGTNSRFQAAKEAGQQEIGQSSRPESDRPEVASLVRKL 370
            G  GGRG WR    +E  ++ +G  S  + A E G   +   +       E+     K+
Sbjct: 271 NGGRGGRGDWRR--RDENWRDIDGPESSHRRAVEEGVDRV--PNEESVTAAEITLRQAKI 330

BLAST of Lag0007722 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-23
Identity = 73/244 (29.92%), Postives = 119/244 (48.77%), Query Frame = 0

Query: 45  AADSIIKQLGELKVTDAKRACMYKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMM 104
           AA +++++    K+T  +      +   A + T   LE +++CK+ + R IS  V  + +
Sbjct: 2   AASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTL 61

Query: 105 PKIWNQEHTI--IHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDED 164
              W  +     +  +GFN+FL  F  +  + RI+  GPW +D+A+++++ P       D
Sbjct: 62  KIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLD 121

Query: 165 MDF------------------KELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDV 224
           MDF                  K +   +G+ +G  E V+    NN  W   LR++++ DV
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDV 181

Query: 225 SVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKEC-EVNYGSNNEELSYG 268
             PL RGI L         WI + YE+L DF Y CG L HI+K+C +    S ++ L YG
Sbjct: 182 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG 241

BLAST of Lag0007722 vs. NCBI nr
Match: XP_023921482.1 (uncharacterized protein LOC112032948 [Quercus suber])

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-23
Identity = 62/178 (34.83%), Postives = 105/178 (58.99%), Query Frame = 0

Query: 82  ENAILCKIFTNRKISLEVFCSMMPKIWNQEHTI-IHHMGFNLFLCKFWNTRIKGRIIDFG 141
           +N +L KI  ++ IS+      M  +W     + I  +  +LFL +F + R K +++D  
Sbjct: 37  KNCVLMKILAHKNISIGALRKNMRMLWKPNKGVQISEIDEDLFLVEFGDGRDKKKVLDMC 96

Query: 142 PWFYDKAMLLMEEPKGDIYDEDMDF--KELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRI 201
           PW Y+K ++L++E  G    ++++   KE+ +AIG+ LG+V ++D+ E    QWE  LR+
Sbjct: 97  PWSYEKQLVLLQEFDGKFTPKEVEIRTKEIGLAIGTKLGEVLEIDVQE-FGVQWEMCLRV 156

Query: 202 KIQIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSN 257
           K+++DV+  L RG  + + +G   RW+   YE+L +FCY CGLL H +K+C  N   N
Sbjct: 157 KVRLDVTKRLVRGKKI-TVEGGESRWVNFKYERLPNFCYRCGLLNHALKDCLENDAEN 212

BLAST of Lag0007722 vs. ExPASy TrEMBL
Match: A0A803MME0 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-25
Identity = 75/253 (29.64%), Postives = 135/253 (53.36%), Query Frame = 0

Query: 46  ADSIIKQLGELKVT-DAKRACMYKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMM 105
           AD +IK+  +L++T D       +L  +  D +K QL  A++ K+ T +  ++E     +
Sbjct: 2   ADELIKEWEKLQLTIDENTVVGEELILNDDDFSKDQLRLALIGKLCTVKPFNIEEMKRTL 61

Query: 106 PKIWN-QEHTIIHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDEDM 165
            K+W   ++ ++  +  N F+ +F+N   K R++D  PWF+D  +LL++E +G++   ++
Sbjct: 62  MKVWRLNDNMVVRMLDTNFFVFQFFNDADKKRVMDGMPWFFDGKVLLLQEIQGEVQPSEV 121

Query: 166 DFK------------------ELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDVS 225
           DF+                  + + +IG  LG    ++LD++    W   +R K+ ++V 
Sbjct: 122 DFECTPMWIRLFDVPFNRRNPQAIKSIGESLGGF--IELDDNGPLGWGEFVRHKVMVNVK 181

Query: 226 VPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSNNEE----LS 274
            PL+RG+FL + +    RWI + YE+L DFC+ CG+L H  KEC      + E+      
Sbjct: 182 KPLRRGMFLATGE-SKPRWIDIKYERLADFCFYCGILDHTEKECSKKEEDDLEKQEMVYQ 241

BLAST of Lag0007722 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-24
Identity = 92/318 (28.93%), Postives = 150/318 (47.17%), Query Frame = 0

Query: 77  TKHQLENAILCKIFTNRKISLEVFCSMMPKIWN-QEHTIIHHMGFNLFLCKFWNTRIKGR 136
           T   ++  ++ K+ T+++IS E   S+M  +W     T    +G N+++  F +   K R
Sbjct: 31  TADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSR 90

Query: 137 IIDFGPWFYDKAMLLMEEPKGDIYDEDMDFK------------------ELVVAIGSLLG 196
           ++  GPW ++K++L++  P       DM+F                   E+   +G+ LG
Sbjct: 91  VLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLG 150

Query: 197 KVEQVDLDEDNNKQWEFSLRIKIQIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCY 256
            VE+++ D  +     F +R++++IDVS PL+RGI L++S G  D W  + YEKL DFCY
Sbjct: 151 DVEEIEGDGADGWAGPF-IRVRVKIDVSKPLRRGIKLKNSDG-KDIWCPLRYEKLPDFCY 210

Query: 257 GCGLLGHIIKECE--VNYGSNNEELSYGPSLRKPVKLKTHEFTHGSTSTMFGR-GRG--- 316
            CG +GH  +ECE      + N    YG  LR  +  K+            GR GRG   
Sbjct: 211 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQV 270

Query: 317 RGADGGRGSWRYTVAEEVEKEQEGTNSRFQAAKEAGQQEIGQSSRPESDRPEVASLVRKL 370
            G  GGRG WR    +E  ++ +G  S  + A E G   +   +       E+     K+
Sbjct: 271 NGGRGGRGDWRR--RDENWRDIDGPESSHRRAVEEGVDRV--PNEESVTAAEITLRQAKI 330

BLAST of Lag0007722 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-24
Identity = 73/244 (29.92%), Postives = 119/244 (48.77%), Query Frame = 0

Query: 45  AADSIIKQLGELKVTDAKRACMYKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMM 104
           AA +++++    K+T  +      +   A + T   LE +++CK+ + R IS  V  + +
Sbjct: 2   AASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTL 61

Query: 105 PKIWNQEHTI--IHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDED 164
              W  +     +  +GFN+FL  F  +  + RI+  GPW +D+A+++++ P       D
Sbjct: 62  KIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLD 121

Query: 165 MDF------------------KELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDV 224
           MDF                  K +   +G+ +G  E V+    NN  W   LR++++ DV
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDV 181

Query: 225 SVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKEC-EVNYGSNNEELSYG 268
             PL RGI L         WI + YE+L DF Y CG L HI+K+C +    S ++ L YG
Sbjct: 182 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG 241

BLAST of Lag0007722 vs. ExPASy TrEMBL
Match: A0A6P9EGW2 (uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23
Identity = 80/265 (30.19%), Postives = 132/265 (49.81%), Query Frame = 0

Query: 56  LKVTDAKRACMYKLQEDATDKTKHQLENA-ILCKIFTNRKISLEVFCSMMPKIWNQEHTI 115
           LK+T+ ++   Y  +E+ T    H + N+ ++  +  +R+++   F + M ++WN E  I
Sbjct: 12  LKLTEEEQQEYYLKEEEIT--FSHDISNSCLVALVAADREVNKGAFKATMTRLWNGEGGI 71

Query: 116 -IHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDEDMDF-------- 175
               +G N FL +F N+ ++ R++   PW +D+ ++ ++E KG +  +D+DF        
Sbjct: 72  TFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRLALKDIDFSLEPFWLQ 131

Query: 176 ----------KELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDVSVPLKRGIFLQ 235
                     K     +G+  GKV  VD+DE   + W   LR+K+ ID+S PL RG  + 
Sbjct: 132 LQDLPFATMNKRTSEKLGTSAGKVIMVDVDE-KGRAWGEVLRVKVMIDLSKPLTRGCVI- 191

Query: 236 SSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSNN----EELSYGPSLR-KPV 295
            + GD   WI   YEKL  FCY CG++ H    C  ++   +      L YGP LR  P 
Sbjct: 192 -NVGDARSWIPFKYEKLPSFCYYCGIVLHTHHRCSRHFSDGSTHTKSPLQYGPWLRADPP 251

BLAST of Lag0007722 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-23
Identity = 67/244 (27.46%), Postives = 119/244 (48.77%), Query Frame = 0

Query: 47  DSIIKQLGELKVTDAKRACMYKLQEDATDKTKHQLENAILCKIFTNRKISLEVFCSMMPK 106
           ++++    + K+T  +      +  DA    +  L  +++ K+   R IS +V   ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 107 IWNQEHTI-IHHMGFNLFLCKFWNTRIKGRIIDFGPWFYDKAMLLMEEPKGDIYDEDMDF 166
            W  EH + +  +G NLFL  F       R++  GPWF+DKA++++++P       +++F
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 167 ------------------KELVVAIGSLLGKVEQVDLDEDNNKQWEFSLRIKIQIDVSVP 226
                             K + + +G+ +G    VD +E     W  SLRI++ ID++ P
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNE-KGFSWGASLRIRVLIDITKP 183

Query: 227 LKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKECEVNYGSNNEE----LSYG 268
           L+RGI +         WI + YE+L DFCY CG++GH   +C+  Y +  ++      YG
Sbjct: 184 LRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYG 243

BLAST of Lag0007722 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 45.1 bits (105), Expect = 2.1e-04
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 0

Query: 201 QIDVSVPLKRGIFLQSSKGDNDRWIKVTYEKLLDFCYGCGLLGHIIKEC 250
           +I  S+  + G+FL+++ G +   +K  YEKL +FC  CG+L H   EC
Sbjct: 122 RIITSIGERMGLFLETNLGRDVSVLKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_021713609.11.2e-2530.49uncharacterized protein LOC110681792 [Chenopodium quinoa][more]
XP_015380691.17.9e-2533.17uncharacterized protein LOC107174364 [Citrus sinensis][more]
XP_022149484.15.1e-2428.93uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_022132681.11.1e-2329.92uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_023921482.11.9e-2334.83uncharacterized protein LOC112032948 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A803MME02.9e-2529.64Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A6J1D7652.5e-2428.93uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1BSZ15.5e-2429.92uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6P9EGW21.2e-2330.19uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 P... [more]
A0A6J1DU551.6e-2327.46uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT3G42140.12.1e-0438.78zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..335
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 85..468
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 75..152
e-value: 3.4E-7
score: 29.9
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 202..250
e-value: 1.1E-10
score: 41.0
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 85..468
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 236..249
score: 9.075821

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007722.1Lag0007722.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding