Lag0007291 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTCTCATTCGACATTCTCTCTTACCAAGCTCTCGTACTCGCCAGGGTTGAGGAGGCAGTCCGTGCCGTGAGCTAATTGGGCTTCGAGATTGCGTATACGCGAAAAGAGCTCGCTTTCGACTTTCTACCTCGGCGTTTTGTGCCCGGTTCAGGTTCAGGAAAGGGTCTTATCTCTTTCATTGGAGCACATTGATGCCGAAGGAGTCTTCGGAACCGGTGGAGAGGCTATGATGATTGAAGGCTATTCAAATAGCATGACTGATACCACAAAGAATGGGTATCTAAGTCACACCAGTGGAATAGCTTTTATAGAATAATTCTCTCGATATATGATACCAAAAACCTGCCTTATGACTGATAAGGTCAGGGGTTTCAAAAGACAAAAAAATGACAATTCTACGTGTGATAGAAAAAAATGGAGATCTTCTTTTTTTTTCAGTGTGCGCGGTTCGCCTGCCTTCCTGACCACGGATAGGCTACGGGGCTTTGCACTTCGGCCCCTGAGAATACCACATCAAGGTGACAGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACACCTCGTCTCACCCCCCCGGAGCATATAGATCCACCCAATCGATGAACACTCAAACCAAACTCGCCCATCCTTTTGGGCACAGGGACGCGAGAACCAATCCGAGTAATCCACCGCTTTTTTTTTGAATCTACCTCCTGCAATCTCGGGCGACGCCAAAAAGCCGTCTCGTGCAGGAGCGAAGCCGATAGGGAGAGGGGAAGGAGCAAAGCCACTTTACCGAGTTTACGAGGTGAAGGAGCGCTCACATTTTGTTTTGCTTCCTCTTTCATTTGCATTTCCAAATCCGGCTCGCTCCCGGCTACGTGTCCTTTGGACCCTTTGCTTAGAAGTGGATTCGAACCACTGACACAAGGATTTTCAGTCCTTTGCTCTAACCAGCTGAGCTACCTGAACCACTTTCCTAAAGTCTGTTTTCTTCAAAGAATACGCCCTACCTTACCACTTGACTAGTAAGGGAAAAGCCCTTTACTCAAATAATTAGGGCTTTATTTTTTCGCTTGTTCGTCAAGCTTTCGAGCTGCTCTTTCAATTCAACTGCCGCCTAATCTCCCAACATGCTCAAAAACCGAGAGCCGCCCAGGGACTGGACAACCGGAGGGAGCTTGCTTCTCGAAAGAGGATAGGCCGGTCAAACAAAAACAAGGCGCAACGGGCTCTCCCTCCGCTCCTAGTCACTAAGTTGTGCTATTCTGTCCTCGGGGGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGTTCCACTTCCGTGCCGGAGGAAATGGGATGAGAACCCATGA ATGTATTTCTCATTCGACATTCTCTCTTACCAAGCTCTCGTACTCGCCAGGGTTGAGGAGGCAGTCCGTGCCGTTCAGGAAAGGGTCTTATCTCTTTCATTGGAGCACATTGATGCCGAAGGAGTCTTCGGAACCGGTGGAGAGGCTATGATGATTGAAGGCTATTCAAATAGCATGACTGATACCACAAAGAATGGTGTGCGCGGTTCGCCTGCCTTCCTGACCACGGATAGGCTACGGGGCTTTGCACTTCGGCCCCTGAGAATACCACATCAAGGGACGCGAGAACCAATCCGAGTAATCCACCGCTTTTTTTTTGAATCTACCTCCTGCAATCTCGGGCGACGCCAAAAAGCCGTCTCGTGCAGGAGCGAAGCCGATAGGGAGAGGGGAAGGAGCAAAGCCACTTTACCGAGTTTACGAGGTGAAGGAGCGCTCACATTTTGTTTTGCTTCCTCTTTCATTTGCATTTCCAAATCCGGCTCGCTCCCGGCTACGTGTCCTTTGGACCCTTTGCTTAGAAGTGGATTCGAACCACTGACACAAGGATTTTCAGTCCTTTGCTCTAACCAGCTGAGCTACCTGAACCACTTTCCTAAAGGCTTTATTTTTTCGCTTGTTCGTCAAGCTTTCGAGCTGCTCTTTCAATTCAACTGCCGCCTAATCTCCCAACATGCTCAAAAACCGAGAGCCGCCCAGGGACTGGACAACCGGAGGGAGCTTGCTTCTCGAAAGAGGATAGGCCGGTCAAACAAAAACAAGGCGCAACGGGCTCTCCCTCCGCTCCTAGTCACTAAGTTGTGCTATTCTGTCCTCGGGGGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGTTCCACTTCCGTGCCGGAGGAAATGGGATGAGAACCCATGA ATGTATTTCTCATTCGACATTCTCTCTTACCAAGCTCTCGTACTCGCCAGGGTTGAGGAGGCAGTCCGTGCCGTTCAGGAAAGGGTCTTATCTCTTTCATTGGAGCACATTGATGCCGAAGGAGTCTTCGGAACCGGTGGAGAGGCTATGATGATTGAAGGCTATTCAAATAGCATGACTGATACCACAAAGAATGGTGTGCGCGGTTCGCCTGCCTTCCTGACCACGGATAGGCTACGGGGCTTTGCACTTCGGCCCCTGAGAATACCACATCAAGGGACGCGAGAACCAATCCGAGTAATCCACCGCTTTTTTTTTGAATCTACCTCCTGCAATCTCGGGCGACGCCAAAAAGCCGTCTCGTGCAGGAGCGAAGCCGATAGGGAGAGGGGAAGGAGCAAAGCCACTTTACCGAGTTTACGAGGTGAAGGAGCGCTCACATTTTGTTTTGCTTCCTCTTTCATTTGCATTTCCAAATCCGGCTCGCTCCCGGCTACGTGTCCTTTGGACCCTTTGCTTAGAAGTGGATTCGAACCACTGACACAAGGATTTTCAGTCCTTTGCTCTAACCAGCTGAGCTACCTGAACCACTTTCCTAAAGGCTTTATTTTTTCGCTTGTTCGTCAAGCTTTCGAGCTGCTCTTTCAATTCAACTGCCGCCTAATCTCCCAACATGCTCAAAAACCGAGAGCCGCCCAGGGACTGGACAACCGGAGGGAGCTTGCTTCTCGAAAGAGGATAGGCCGGTCAAACAAAAACAAGGCGCAACGGGCTCTCCCTCCGCTCCTAGTCACTAAGTTGTGCTATTCTGTCCTCGGGGGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGTTCCACTTCCGTGCCGGAGGAAATGGGATGAGAACCCATGA MYFSFDILSYQALVLARVEEAVRAVQERVLSLSLEHIDAEGVFGTGGEAMMIEGYSNSMTDTTKNGVRGSPAFLTTDRLRGFALRPLRIPHQGTREPIRVIHRFFFESTSCNLGRRQKAVSCRSEADRERGRSKATLPSLRGEGALTFCFASSFICISKSGSLPATCPLDPLLRSGFEPLTQGFSVLCSNQLSYLNHFPKGFIFSLVRQAFELLFQFNCRLISQHAQKPRAAQGLDNRRELASRKRIGRSNKNKAQRALPPLLVTKLCYSVLGGTPPRGSFSHVISPVPLPCRRKWDENP Homology
BLAST of Lag0007291 vs. NCBI nr
Match: YP_173477.1 (hypothetical protein NitaMp140 [Nicotiana tabacum] >BAD83543.1 hypothetical protein [Nicotiana tabacum]) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-11 Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of Lag0007291 vs. NCBI nr
Match: GER39013.1 (Orf110b protein [Striga asiatica]) HSP 1 Score: 72.8 bits (177), Expect = 5.7e-09 Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of Lag0007291 vs. NCBI nr
Match: NP_064104.1 (orf110b gene product [Beta vulgaris subsp. vulgaris] >YP_004222346.1 hypothetical protein BevumaM_p112 [Beta vulgaris subsp. maritima] >YP_004842151.1 hypothetical protein BemaM_p107 [Beta macrocarpa] >CBJ14076.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBJ17566.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBJ20714.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBL51962.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX24956.1 hypothetical protein [Beta macrocarpa]) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-06 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of Lag0007291 vs. NCBI nr
Match: KJB09734.1 (hypothetical protein B456_001G161000, partial [Gossypium raimondii]) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-06 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of Lag0007291 vs. NCBI nr
Match: CAD1835933.1 (unnamed protein product [Ananas comosus var. bracteatus]) HSP 1 Score: 59.3 bits (142), Expect = 6.5e-05 Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of Lag0007291 vs. ExPASy TrEMBL
Match: Q5M9T5 (Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=orf116b PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.0e-12 Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of Lag0007291 vs. ExPASy TrEMBL
Match: A0A4D8YGR2 (Ribulose bisphosphate carboxylase large chain OS=Salvia splendens OX=180675 GN=Saspl_047308 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09 Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 0
BLAST of Lag0007291 vs. ExPASy TrEMBL
Match: A0A5A7Q1I4 (Orf110b protein OS=Striga asiatica OX=4170 GN=STAS_15603 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.8e-09 Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of Lag0007291 vs. ExPASy TrEMBL
Match: E6ZE61 (Uncharacterized protein orf110b OS=Beta vulgaris subsp. maritima OX=350892 GN=orf110b PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-06 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of Lag0007291 vs. ExPASy TrEMBL
Match: G2XLW7 (Uncharacterized protein OS=Beta macrocarpa OX=343494 GN=orf110b PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-06 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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