Lag0007283 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGGTAAGAGTATGAACATCTATTAGTCCGTATCATGGGTCTACTTGTTACAAAAGGCGAACATCCCTATTCCAAAACATACACATAAGTCCTCAGGCAGGCGGGGACGAAAAGAGTCTATTTCTTTACAATATTCCGGAATGTATCATGGCCCTATCTATTCATCTTTTTATTAAAAAAAAAGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGGTGAGATCCGATGAGATCTGATCTCTCGAACGAAGTGAAGTGATAGGAAGAGAAGACAGCTGGCGGGAGATCTCTATTCATTACACCCCCTTGTATAGGTTGGGGAAAACGGAAGTGCGCTCCTGCGCACCAGCTGAAGGAAGGATCTTTGGCATAAAGATACCTTCTTATTAGAGAAAGGGGCAAGCCAAAACCAACTCCTAAAAAGGTTTGACGAAGTATCTCGAGCATTCTCCATCCGCCCGCCAGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGTCTCGAGTCTCGTCTAGATCGATTCATAGATCGATTTCTATCCATATGTATCGGTATCCCCGTGGATAGAGATAAAGATAGGGATCCATCTAGATCTTGATTCACTATTTCCATTTTTTTGATTGATTGCCTTTTTTTTGACAACAAGTTTGAAATCTTAATGCAGGCAAGGAAAGAGAGTTTTTCTATTATTACTTGCAGGATCGGAGCGTAGACGAGCGAGCAGAGCCCAGGGAACGGGGAAGCCCGTCATAGAGCAGTCGACTAGAAGTAGAAGACTGCTGGCCTGAGAGAAGACGGCCTCTCTCGGGAAACATGGCCTAATTTCTCTTCTTTCTTTTTGATTTCGGGTTTCTTTCTTTTTTCAGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGTAAGTAACTCAGCGAGTGCTTTCTAAGAAGGGCTTGACTTGGAAGAAGAAAATGAAATACGAACAACCGCGCTGGTCGTAATAGATCGACTTTCATGCTAGTTCTTGCTCCAGCATGAAAGTTCCATTTCAGGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA MHELRLPCPADPSKKSGRQTAHRESEASGVKGGSNSHKRRGRHIHEKREAVGDWPTMNRYPTFGVPHLSEAGRTNRREEEGEGGLRALSRCCSRITHPFLPLRPACCRGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAVGPRTLKGGGEASRTSDRPGNITNSRRRERFEIPEGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTDPLTIY Homology
BLAST of Lag0007283 vs. NCBI nr
Match: YP_009913620.1 (ribosomal protein S4 [Luffa acutangula] >QLJ93050.1 ribosomal protein S4 [Luffa acutangula]) HSP 1 Score: 634.4 bits (1635), Expect = 1.1e-177 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
BLAST of Lag0007283 vs. NCBI nr
Match: KAF3954221.1 (hypothetical protein CMV_020407 [Castanea mollissima]) HSP 1 Score: 624.8 bits (1610), Expect = 8.9e-175 Identity = 320/351 (91.17%), Postives = 327/351 (93.16%), Query Frame = 0
BLAST of Lag0007283 vs. NCBI nr
Match: ALJ78540.1 (ribosomal protein S4, partial [Malus hupehensis var. mengshanensis]) HSP 1 Score: 612.5 bits (1578), Expect = 4.6e-171 Identity = 309/326 (94.79%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of Lag0007283 vs. NCBI nr
Match: WP_131747055.1 (hypothetical protein [Candidatus Frankia meridionalis]) HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-170 Identity = 311/342 (90.94%), Postives = 316/342 (92.40%), Query Frame = 0
BLAST of Lag0007283 vs. NCBI nr
Match: YP_009522818.1 (ribosomal protein S4 [Styphnolobium japonicum] >AXQ37248.1 ribosomal protein S4 [Styphnolobium japonicum]) HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-170 Identity = 315/337 (93.47%), Postives = 318/337 (94.36%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: Q31708 (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1 SV=2) HSP 1 Score: 498.0 bits (1281), Expect = 1.7e-139 Identity = 267/318 (83.96%), Postives = 283/318 (88.99%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P60498 (NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.0e-104 Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P60497 (NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.0e-97 Identity = 194/205 (94.63%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: Q02500 (NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.0e-96 Identity = 191/211 (90.52%), Postives = 196/211 (92.89%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P26850 (NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 PE=2 SV=2) HSP 1 Score: 261.2 bits (666), Expect = 3.4e-68 Identity = 143/187 (76.47%), Postives = 161/187 (86.10%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A7D6BZG8 (Ribosomal protein S4 OS=Luffa acutangula OX=56866 GN=rps4 PE=3 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 5.5e-178 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A0U2N8V3 (Ribosomal protein S4 (Fragment) OS=Malus hupehensis var. mengshanensis OX=550789 GN=rps4 PE=3 SV=1) HSP 1 Score: 612.5 bits (1578), Expect = 2.2e-171 Identity = 309/326 (94.79%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A385CAP3 (Ribosomal protein S4 OS=Styphnolobium japonicum OX=3897 GN=rps4 PE=3 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 8.4e-171 Identity = 315/337 (93.47%), Postives = 318/337 (94.36%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A2P6P148 (Putative ribosomal protein S4/S9 OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0499001 PE=3 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170 Identity = 308/327 (94.19%), Postives = 315/327 (96.33%), Query Frame = 0
BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: J9JES1 (Ribosomal protein S4 OS=Malus domestica OX=3750 GN=rps4 PE=3 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 4.2e-170 Identity = 307/326 (94.17%), Postives = 315/326 (96.63%), Query Frame = 0
BLAST of Lag0007283 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein ) HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-149 Identity = 277/318 (87.11%), Postives = 290/318 (91.19%), Query Frame = 0
BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 ) HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-149 Identity = 277/318 (87.11%), Postives = 290/318 (91.19%), Query Frame = 0
BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00270.1 (NADH dehydrogenase 6 ) HSP 1 Score: 382.5 bits (981), Expect = 7.2e-106 Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Lag0007283 vs. TAIR 10
Match: AT2G07718.1 (Cytochrome b/b6 protein ) HSP 1 Score: 60.5 bits (145), Expect = 6.3e-09 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00590.1 (Cytochrome b/b6 protein ) HSP 1 Score: 60.5 bits (145), Expect = 6.3e-09 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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