Lag0007283 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007283
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribosomal protein S4
Location	ScvUqRz_1244_HRSCAF_2115: 151156 .. 154286 (+)
RNA-Seq Expression	Lag0007283
Synteny	Lag0007283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGGTAAGAGTATGAACATCTATTAGTCCGTATCATGGGTCTACTTGTTACAAAAGGCGAACATCCCTATTCCAAAACATACACATAAGTCCTCAGGCAGGCGGGGACGAAAAGAGTCTATTTCTTTACAATATTCCGGAATGTATCATGGCCCTATCTATTCATCTTTTTATTAAAAAAAAAGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGGTGAGATCCGATGAGATCTGATCTCTCGAACGAAGTGAAGTGATAGGAAGAGAAGACAGCTGGCGGGAGATCTCTATTCATTACACCCCCTTGTATAGGTTGGGGAAAACGGAAGTGCGCTCCTGCGCACCAGCTGAAGGAAGGATCTTTGGCATAAAGATACCTTCTTATTAGAGAAAGGGGCAAGCCAAAACCAACTCCTAAAAAGGTTTGACGAAGTATCTCGAGCATTCTCCATCCGCCCGCCAGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATATAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGTCTCGAGTCTCGTCTAGATCGATTCATAGATCGATTTCTATCCATATGTATCGGTATCCCCGTGGATAGAGATAAAGATAGGGATCCATCTAGATCTTGATTCACTATTTCCATTTTTTTGATTGATTGCCTTTTTTTTGACAACAAGTTTGAAATCTTAATGCAGGCAAGGAAAGAGAGTTTTTCTATTATTACTTGCAGGATCGGAGCGTAGACGAGCGAGCAGAGCCCAGGGAACGGGGAAGCCCGTCATAGAGCAGTCGACTAGAAGTAGAAGACTGCTGGCCTGAGAGAAGACGGCCTCTCTCGGGAAACATGGCCTAATTTCTCTTCTTTCTTTTTGATTTCGGGTTTCTTTCTTTTTTCAGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGTAAGTAACTCAGCGAGTGCTTTCTAAGAAGGGCTTGACTTGGAAGAAGAAAATGAAATACGAACAACCGCGCTGGTCGTAATAGATCGACTTTCATGCTAGTTCTTGCTCCAGCATGAAAGTTCCATTTCAGGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA

mRNA sequence

ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA

Coding sequence (CDS)

ATGCATGAGCTGAGGCTCCCATGTCCCGCCGACCCTTCGAAAAAGTCAGGTCGTCAAACGGCTCATAGGGAGTCAGAAGCAAGCGGAGTCAAAGGCGGGTCAAACTCACATAAGCGGAGGGGGAGACACATTCATGAAAAGCGAGAAGCCGTGGGGGACTGGCCAACTATGAATAGATATCCGACTTTCGGAGTTCCGCATCTCTCCGAGGCCGGGAGAACAAATAGGCGTGAGGAAGAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTCCCGGATCACCCATCCCTTCCTTCCCCTTCGCCCGGCCTGCTGCAGAGGGGGTTCGATTCCCGTTATACGCGATGTGGCGAAAAAGACGGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGCCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCCTTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACTGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGATCGAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGGGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGCCGAACCTCTGATCGACCTGGAAACATCACAAATTCTCGGCGTCGAGAGAGATTTGAGATTCCGGAAGGACGACGTACCATGATACTTTCTGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCAGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATGTTCTTCATTTTAGATAATGAAACCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGGTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTCCGACGAAATGCTATTGATTTTAGGAGGACTATAATGAGGAGGACGACAGACCCACTCACGATCTACTAA

Protein sequence

MHELRLPCPADPSKKSGRQTAHRESEASGVKGGSNSHKRRGRHIHEKREAVGDWPTMNRYPTFGVPHLSEAGRTNRREEEGEGGLRALSRCCSRITHPFLPLRPACCRGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAVGPRTLKGGGEASRTSDRPGNITNSRRRERFEIPEGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTDPLTIY

Homology

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BLAST of Lag0007283 vs. NCBI nr
Match: YP_009913620.1 (ribosomal protein S4 [Luffa acutangula] >QLJ93050.1 ribosomal protein S4 [Luffa acutangula])

HSP 1 Score: 634.4 bits (1635), Expect = 1.1e-177
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 123 DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 182
           DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ
Sbjct: 2   DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 61

Query: 183 SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 242
           SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS
Sbjct: 62  SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 121

Query: 243 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 302
           HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV
Sbjct: 122 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 181

Query: 303 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 362
           RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE
Sbjct: 182 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 241

Query: 363 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 422
           HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
Sbjct: 242 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 301

Query: 423 IKRIELPTHYSEVNHRTLKAV 444
           IKRIELPTHYSEVNHRTLKAV
Sbjct: 302 IKRIELPTHYSEVNHRTLKAV 322

[Close]

BLAST of Lag0007283 vs. NCBI nr
Match: KAF3954221.1 (hypothetical protein CMV_020407 [Castanea mollissima])

HSP 1 Score: 624.8 bits (1610), Expect = 8.9e-175
Identity = 320/351 (91.17%), Postives = 327/351 (93.16%), Query Frame = 0


Query: 93  SRITHPFLPLRPACCRGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTII 152
           + I HP      A  RGGSIPVIRDVAKKTDSTRYALPALRF+TCRLL GNVRNRELTII
Sbjct: 20  NNILHPL-----ASSRGGSIPVIRDVAKKTDSTRYALPALRFKTCRLLSGNVRNRELTII 79

Query: 153 QRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIP 212
           QRRILR+LRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHG+LPITEMHRGTERTSYIP
Sbjct: 80  QRRILRRLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGNLPITEMHRGTERTSYIP 139

Query: 213 FPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQEND 272
           FPLNPETR DVI VRLHF ETIPQARQPISHRR+CVN GMVSITH KVSHGD ISFQEND
Sbjct: 140 FPLNPETRLDVILVRLHFCETIPQARQPISHRRLCVNNGMVSITHLKVSHGDLISFQEND 199

Query: 273 ARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQ 332
           ARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQ
Sbjct: 200 ARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQ 259

Query: 333 QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTR 392
           QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYH KSLFL  RRNEKNRN+PTR
Sbjct: 260 QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLLKRRNEKNRNIPTR 319

Query: 393 TRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAV 444
           TRS IVYNSSLYSNSTYCSA PHQFTMK +IKRIELPTHYSEVNHRT KAV
Sbjct: 320 TRSTIVYNSSLYSNSTYCSAPPHQFTMKRRIKRIELPTHYSEVNHRTPKAV 365

[Close]

BLAST of Lag0007283 vs. NCBI nr
Match: ALJ78540.1 (ribosomal protein S4, partial [Malus hupehensis var. mengshanensis])

HSP 1 Score: 612.5 bits (1578), Expect = 4.6e-171
Identity = 309/326 (94.79%), Postives = 316/326 (96.93%), Query Frame = 0


Query: 118 VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENL 177
           VAKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NL
Sbjct: 1   VAKKTDSTRYAVPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNL 60

Query: 178 NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQA 237
           NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHF ETIPQA
Sbjct: 61  NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQA 120

Query: 238 RQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKF 297
           RQPISH RVCVN GMVSITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKF
Sbjct: 121 RQPISHGRVCVNNGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKF 180

Query: 298 LDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLG 357
           LDHPVRMWRRTK EWFHLLKT RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLG
Sbjct: 181 LDHPVRMWRRTKAEWFHLLKTHRGCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLG 240

Query: 358 SSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF 417
           SSFAEHNRMKRNLYH KSLFLSNRRN+KNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Sbjct: 241 SSFAEHNRMKRNLYHFKSLFLSNRRNKKNRNLPTRTRSPIVYNSSLYRNSTYCSASPHQF 300

Query: 418 TMKSKIKRIELPTHYSEVNHRTLKAV 444
           TMK +IKRIELPTHYSEVNHRTLKAV
Sbjct: 301 TMKRRIKRIELPTHYSEVNHRTLKAV 326

[Close]

BLAST of Lag0007283 vs. NCBI nr
Match: WP_131747055.1 (hypothetical protein [Candidatus Frankia meridionalis])

HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-170
Identity = 311/342 (90.94%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 102 LRPACCRGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLR 161
           +RP    G   P+     K+       + ALRF+TCRLLLGNVRNRELTIIQRRILRKLR
Sbjct: 31  IRPPAAEGVRFPLYAMWRKRLIQRDMTMTALRFKTCRLLLGNVRNRELTIIQRRILRKLR 90

Query: 162 NKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS 221
           NKKRSIKRKIYPR NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS
Sbjct: 91  NKKRSIKRKIYPRSNLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS 150

Query: 222 DVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIR 281
           DVIPVRLHF ETIPQARQPISHRRVCVNKGMVSITHFKVSHGD ISFQENDARIRGEEIR
Sbjct: 151 DVIPVRLHFCETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIR 210

Query: 282 RSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEE 341
           RSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEE
Sbjct: 211 RSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEE 270

Query: 342 DLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNS 401
           DLERTKKFGSEKVCLGSSFAEHNRMKRN YH KSLFLSNRRNEKNRNLPTRTRSPIVYNS
Sbjct: 271 DLERTKKFGSEKVCLGSSFAEHNRMKRNFYHFKSLFLSNRRNEKNRNLPTRTRSPIVYNS 330

Query: 402 SLYSNSTYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAV 444
           SLYSNSTYCSASPHQFTMK KIKRIELPTHYSEVNHRTLKAV
Sbjct: 331 SLYSNSTYCSASPHQFTMKRKIKRIELPTHYSEVNHRTLKAV 372

[Close]

BLAST of Lag0007283 vs. NCBI nr
Match: YP_009522818.1 (ribosomal protein S4 [Styphnolobium japonicum] >AXQ37248.1 ribosomal protein S4 [Styphnolobium japonicum])

HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-170
Identity = 315/337 (93.47%), Postives = 318/337 (94.36%), Query Frame = 0


Query: 108 RGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI 167
           RGG IPVIRDVAKKTDS RYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSI
Sbjct: 6   RGGLIPVIRDVAKKTDSMRYALPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSI 65

Query: 168 KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR 227
           KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPF LNPETRSDVIPVR
Sbjct: 66  KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFLLNPETRSDVIPVR 125

Query: 228 LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIE 287
           LHF ETIPQARQPISHRRVCVN  MVSIT  KVSHGD ISFQENDARIRGEEIRRSFYIE
Sbjct: 126 LHFRETIPQARQPISHRRVCVNNRMVSITRLKVSHGDLISFQENDARIRGEEIRRSFYIE 185

Query: 288 ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFL-QQLRSSMQEEDLERT 347
           ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLL KSRFL QQLR SMQ E LERT
Sbjct: 186 ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLQKSRFLQQQLRFSMQAEYLERT 245

Query: 348 KKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSN 407
           KKFGSEKVCLGSSFAEHNRMKRNLYH KSLFLS RRNEKNRNLPTRTRSPIVYNSSLYSN
Sbjct: 246 KKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSN 305

Query: 408 STYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAV 444
           STYCSASPHQFTMK +IKRIELPTHYSEVNHRT KAV
Sbjct: 306 STYCSASPHQFTMKRRIKRIELPTHYSEVNHRTPKAV 342

[Close]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: Q31708 (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1 SV=2)

HSP 1 Score: 498.0 bits (1281), Expect = 1.7e-139
Identity = 267/318 (83.96%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 129 LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTR 188
           L  LRFQTCRLL GNV NRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTR
Sbjct: 14  LSPLRFQTCRLLSGNVWNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLTSYIQLQTTR 73

Query: 189 KLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVC 248
           KLP F+GDLPITEMHRGT+RTSYIPF LN ETR DVIP+RL+F ETIPQARQ ISHRRVC
Sbjct: 74  KLPFFYGDLPITEMHRGTKRTSYIPFLLNLETRFDVIPLRLYFLETIPQARQLISHRRVC 133

Query: 249 VNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRR 308
           VNKGMVSITHFK+SHGD ISFQEN+A IRGEEIRRSFY EI VEKIIGK L  P+RMWRR
Sbjct: 134 VNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPLRMWRR 193

Query: 309 TKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMK 368
           +KTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMK
Sbjct: 194 SKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMK 253

Query: 369 RNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR 428
           RNL  LKSLFLS RR +KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Sbjct: 254 RNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKR 313

Query: 429 IELPTHYSEVNHRTLKAV 444
           IELPTHY EVN+RT KAV
Sbjct: 314 IELPTHYLEVNYRTPKAV 329

[Close]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P60498 (NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-104
Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 482 MILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGA 541
           MILSVLSSPALVSGLMV RAKNPVHSVLFPIPVFR+TSGLLLLLGLDFFAMIFPVVHIGA
Sbjct: 1   MILSVLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVHIGA 60

Query: 542 IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTT 601
           IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNE+IPLLPTQRNTT
Sbjct: 61  IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTT 120

Query: 602 SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQ 661
           SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLV SLILLVAMIGAIVLTMHRTTKVKRQ
Sbjct: 121 SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQ 180

Query: 662 DVFRRNAIDFRRTIMRRTTDPLTIY 687
           DVFRRNAIDFRRTIMRRTTDPLTIY
Sbjct: 181 DVFRRNAIDFRRTIMRRTTDPLTIY 205

[Close]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P60497 (NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-97
Identity = 194/205 (94.63%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 482 MILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGA 541
           MILSVLSS ALVSGLMVVRAKNPVHSVLF I VF +TSGLLLLLGLDFFAMIF VV+IGA
Sbjct: 1   MILSVLSSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGA 60

Query: 542 IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTT 601
           IAV FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNE+IPLLPTQRNTT
Sbjct: 61  IAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTT 120

Query: 602 SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQ 661
           SLRYTVYAGKVRSWTNLETLGNLLYTYY VWFLV SLILLVAMIGAIVLTMHRTTKVKRQ
Sbjct: 121 SLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQ 180

Query: 662 DVFRRNAIDFRRTIMRRTTDPLTIY 687
           DVFRRNAIDFRRTIMRRTTDPLTIY
Sbjct: 181 DVFRRNAIDFRRTIMRRTTDPLTIY 205

[Close]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: Q02500 (NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-96
Identity = 191/211 (90.52%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 472 RFEIPEGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFA 531
           +F    GRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPI VF +TSGLL+LLGLDF A
Sbjct: 9   KFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSA 68

Query: 532 MIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 591
           MI PVVHIGAIAVSFLFVVMMF+IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI
Sbjct: 69  MISPVVHIGAIAVSFLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 128

Query: 592 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLT 651
           PLLPT RNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLT
Sbjct: 129 PLLPTHRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLT 188

Query: 652 MHRTTKVKRQDVFRRNAIDFRRTIMRRTTDP 683
           MHRTTKVKRQDVFRRNA+D R  IM RT  P
Sbjct: 189 MHRTTKVKRQDVFRRNALDSRSHIMNRTISP 219

[Close]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot
Match: P26850 (NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 PE=2 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 3.4e-68
Identity = 143/187 (76.47%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 491 ALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVV 550
           ALVSG MV+RAKNPVHSVLF I VF NTSGLL+LLGLDFFAMIF VV++GAIAV FLFVV
Sbjct: 11  ALVSGAMVIRAKNPVHSVLFLILVFCNTSGLLVLLGLDFFAMIFLVVYVGAIAVLFLFVV 70

Query: 551 MMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAG 610
           MM HI+I EIHE VLRYLPV GIIGLIF  E+F ++DN+ IP+LPT+ + T L YTVYAG
Sbjct: 71  MMLHIRIEEIHENVLRYLPVGGIIGLIFLLEIFLMVDNDYIPILPTKLSATYLTYTVYAG 130

Query: 611 KVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 670
           K+ SWTNLETLGNLLYT Y   FLVSSLILLVA+IGAIVLTMH+TTKVKRQDVF +NAID
Sbjct: 131 KIHSWTNLETLGNLLYTTYFFLFLVSSLILLVALIGAIVLTMHKTTKVKRQDVFIQNAID 190

Query: 671 FRRTIMR 678
           F+ TI +
Sbjct: 191 FQNTIKK 197

[Close]

BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A7D6BZG8 (Ribosomal protein S4 OS=Luffa acutangula OX=56866 GN=rps4 PE=3 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 5.5e-178
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 123 DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 182
           DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ
Sbjct: 2   DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQ 61

Query: 183 SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 242
           SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS
Sbjct: 62  SQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPIS 121

Query: 243 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 302
           HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV
Sbjct: 122 HRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPV 181

Query: 303 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 362
           RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE
Sbjct: 182 RMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAE 241

Query: 363 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 422
           HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
Sbjct: 242 HNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK 301

Query: 423 IKRIELPTHYSEVNHRTLKAV 444
           IKRIELPTHYSEVNHRTLKAV
Sbjct: 302 IKRIELPTHYSEVNHRTLKAV 322

[Close]

BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A0U2N8V3 (Ribosomal protein S4 (Fragment) OS=Malus hupehensis var. mengshanensis OX=550789 GN=rps4 PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 2.2e-171
Identity = 309/326 (94.79%), Postives = 316/326 (96.93%), Query Frame = 0


Query: 118 VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENL 177
           VAKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NL
Sbjct: 1   VAKKTDSTRYAVPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNL 60

Query: 178 NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQA 237
           NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHF ETIPQA
Sbjct: 61  NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQA 120

Query: 238 RQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKF 297
           RQPISH RVCVN GMVSITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKF
Sbjct: 121 RQPISHGRVCVNNGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKF 180

Query: 298 LDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLG 357
           LDHPVRMWRRTK EWFHLLKT RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLG
Sbjct: 181 LDHPVRMWRRTKAEWFHLLKTHRGCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLG 240

Query: 358 SSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF 417
           SSFAEHNRMKRNLYH KSLFLSNRRN+KNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Sbjct: 241 SSFAEHNRMKRNLYHFKSLFLSNRRNKKNRNLPTRTRSPIVYNSSLYRNSTYCSASPHQF 300

Query: 418 TMKSKIKRIELPTHYSEVNHRTLKAV 444
           TMK +IKRIELPTHYSEVNHRTLKAV
Sbjct: 301 TMKRRIKRIELPTHYSEVNHRTLKAV 326

[Close]

BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A385CAP3 (Ribosomal protein S4 OS=Styphnolobium japonicum OX=3897 GN=rps4 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 8.4e-171
Identity = 315/337 (93.47%), Postives = 318/337 (94.36%), Query Frame = 0


Query: 108 RGGSIPVIRDVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI 167
           RGG IPVIRDVAKKTDS RYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSI
Sbjct: 6   RGGLIPVIRDVAKKTDSMRYALPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSI 65

Query: 168 KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR 227
           KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPF LNPETRSDVIPVR
Sbjct: 66  KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFLLNPETRSDVIPVR 125

Query: 228 LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIE 287
           LHF ETIPQARQPISHRRVCVN  MVSIT  KVSHGD ISFQENDARIRGEEIRRSFYIE
Sbjct: 126 LHFRETIPQARQPISHRRVCVNNRMVSITRLKVSHGDLISFQENDARIRGEEIRRSFYIE 185

Query: 288 ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFL-QQLRSSMQEEDLERT 347
           ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLL KSRFL QQLR SMQ E LERT
Sbjct: 186 ISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLQKSRFLQQQLRFSMQAEYLERT 245

Query: 348 KKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSN 407
           KKFGSEKVCLGSSFAEHNRMKRNLYH KSLFLS RRNEKNRNLPTRTRSPIVYNSSLYSN
Sbjct: 246 KKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSN 305

Query: 408 STYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAV 444
           STYCSASPHQFTMK +IKRIELPTHYSEVNHRT KAV
Sbjct: 306 STYCSASPHQFTMKRRIKRIELPTHYSEVNHRTPKAV 342

[Close]

BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: A0A2P6P148 (Putative ribosomal protein S4/S9 OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0499001 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170
Identity = 308/327 (94.19%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 117 DVAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPREN 176
           DVAKKTDSTRYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+N
Sbjct: 49  DVAKKTDSTRYALPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKN 108

Query: 177 LNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQ 236
           LNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHF ETIPQ
Sbjct: 109 LNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQ 168

Query: 237 ARQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGK 296
           ARQPISHRRVCVN GMVSITH KVSH D I FQENDARIRGEEIRRSFYIEISVEKIIGK
Sbjct: 169 ARQPISHRRVCVNNGMVSITHLKVSHADLIFFQENDARIRGEEIRRSFYIEISVEKIIGK 228

Query: 297 FLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCL 356
           FLDHPVRMWRRTKTEWFHLLKT+RGCRLLLKSRFLQQL SSMQEEDLE+TK+FGSEKVCL
Sbjct: 229 FLDHPVRMWRRTKTEWFHLLKTQRGCRLLLKSRFLQQLGSSMQEEDLEKTKRFGSEKVCL 288

Query: 357 GSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQ 416
           GSSFAEHNRMKRNLYH KSLFLS RRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQ
Sbjct: 289 GSSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQ 348

Query: 417 FTMKSKIKRIELPTHYSEVNHRTLKAV 444
           FTMK +IKRIELPTHYSEVNHRT KAV
Sbjct: 349 FTMKRRIKRIELPTHYSEVNHRTPKAV 375

[Close]

BLAST of Lag0007283 vs. ExPASy TrEMBL
Match: J9JES1 (Ribosomal protein S4 OS=Malus domestica OX=3750 GN=rps4 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 4.2e-170
Identity = 307/326 (94.17%), Postives = 315/326 (96.63%), Query Frame = 0


Query: 118 VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENL 177
           +AKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NL
Sbjct: 1   MAKKTDSTRYAVPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNL 60

Query: 178 NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQA 237
           NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHF ETIPQA
Sbjct: 61  NSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFCETIPQA 120

Query: 238 RQPISHRRVCVNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKF 297
           RQPISH RVCVN GMVSITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKF
Sbjct: 121 RQPISHGRVCVNNGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKF 180

Query: 298 LDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLG 357
           LDHPVRMWRRTK EWFHLLKT RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLG
Sbjct: 181 LDHPVRMWRRTKAEWFHLLKTHRGCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLG 240

Query: 358 SSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF 417
           SSFAEHNRMKRNLYH KSLFLSNRRN+KNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Sbjct: 241 SSFAEHNRMKRNLYHFKSLFLSNRRNKKNRNLPTRTRSPIVYNSSLYRNSTYCSASPHQF 300

Query: 418 TMKSKIKRIELPTHYSEVNHRTLKAV 444
           TMK +IKRIELPTH SEVNHRTLKAV
Sbjct: 301 TMKRRIKRIELPTHXSEVNHRTLKAV 326

[Close]

BLAST of Lag0007283 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-149
Identity = 277/318 (87.11%), Postives = 290/318 (91.19%), Query Frame = 0


Query: 129 LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTR 188
           L  LRFQTCRLL GNVRNRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTR
Sbjct: 14  LSPLRFQTCRLLSGNVRNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLTSYIQLQTTR 73

Query: 189 KLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVC 248
           KLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVIP+RLHF ETIPQARQPISHRRVC
Sbjct: 74  KLPLFHGDLPITEMHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVC 133

Query: 249 VNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRR 308
           VNKGMVSITHFK+SHGD ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR
Sbjct: 134 VNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRR 193

Query: 309 TKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMK 368
           +KTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMK
Sbjct: 194 SKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMK 253

Query: 369 RNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR 428
           RNL  LKSLFLS RR +KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Sbjct: 254 RNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKR 313

Query: 429 IELPTHYSEVNHRTLKAV 444
           IELPTHYSEVNHRT KAV
Sbjct: 314 IELPTHYSEVNHRTPKAV 329

[Close]

BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 )

HSP 1 Score: 525.8 bits (1353), Expect = 5.3e-149
Identity = 277/318 (87.11%), Postives = 290/318 (91.19%), Query Frame = 0


Query: 129 LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTR 188
           L  LRFQTCRLL GNVRNRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTR
Sbjct: 14  LSPLRFQTCRLLSGNVRNRELTIIQRRILRRLRNRKRSIKKRKIYPKKYLTSYIQLQTTR 73

Query: 189 KLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVC 248
           KLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVIP+RLHF ETIPQARQPISHRRVC
Sbjct: 74  KLPLFHGDLPITEMHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVC 133

Query: 249 VNKGMVSITHFKVSHGDRISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRR 308
           VNKGMVSITHFK+SHGD ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR
Sbjct: 134 VNKGMVSITHFKLSHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRR 193

Query: 309 TKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMK 368
           +KTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMK
Sbjct: 194 SKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMK 253

Query: 369 RNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR 428
           RNL  LKSLFLS RR +KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Sbjct: 254 RNL--LKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRRIKR 313

Query: 429 IELPTHYSEVNHRTLKAV 444
           IELPTHYSEVNHRT KAV
Sbjct: 314 IELPTHYSEVNHRTPKAV 329

[Close]

BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00270.1 (NADH dehydrogenase 6 )

HSP 1 Score: 382.5 bits (981), Expect = 7.2e-106
Identity = 201/205 (98.05%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 482 MILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGA 541
           MILSVLSSPALVSGLMV RAKNPVHSVLFPIPVFR+TSGLLLLLGLDFFAMIFPVVHIGA
Sbjct: 1   MILSVLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVHIGA 60

Query: 542 IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTT 601
           IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNE+IPLLPTQRNTT
Sbjct: 61  IAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTT 120

Query: 602 SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQ 661
           SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLV SLILLVAMIGAIVLTMHRTTKVKRQ
Sbjct: 121 SLRYTVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQ 180

Query: 662 DVFRRNAIDFRRTIMRRTTDPLTIY 687
           DVFRRNAIDFRRTIMRRTTDPLTIY
Sbjct: 181 DVFRRNAIDFRRTIMRRTTDPLTIY 205

[Close]

BLAST of Lag0007283 vs. TAIR 10
Match: AT2G07718.1 (Cytochrome b/b6 protein )

HSP 1 Score: 60.5 bits (145), Expect = 6.3e-09
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 481 TMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIG 540
           TMILSVLSSPALVSGLMV RAKN VHSVLFPIP+F + + L       +F  +  + H+ 
Sbjct: 44  TMILSVLSSPALVSGLMVARAKNLVHSVLFPIPIFFSINQL-----FHYFCRLPIIKHLA 103

Query: 541 AIAVSFLFVVMMF 554
                 LF++  F
Sbjct: 104 TKCQLLLFLISHF 111

[Close]

BLAST of Lag0007283 vs. TAIR 10
Match: ATMG00590.1 (Cytochrome b/b6 protein )

HSP 1 Score: 60.5 bits (145), Expect = 6.3e-09
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 481 TMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIG 540
           TMILSVLSSPALVSGLMV RAKN VHSVLFPIP+F + + L       +F  +  + H+ 
Sbjct: 44  TMILSVLSSPALVSGLMVARAKNLVHSVLFPIPIFFSINQL-----FHYFCRLPIIKHLA 103

Query: 541 AIAVSFLFVVMMF 554
                 LF++  F
Sbjct: 104 TKCQLLLFLISHF 111

The following BLAST results are available for this feature:

BLAST of Lag0007283 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913620.1	1.1e-177	100.00	ribosomal protein S4 [Luffa acutangula] >QLJ93050.1 ribosomal protein S4 [Luffa ...	[more]
KAF3954221.1	8.9e-175	91.17	hypothetical protein CMV_020407 [Castanea mollissima]	[more]
ALJ78540.1	4.6e-171	94.79	ribosomal protein S4, partial [Malus hupehensis var. mengshanensis]	[more]
WP_131747055.1	1.7e-170	90.94	hypothetical protein [Candidatus Frankia meridionalis]	[more]
YP_009522818.1	1.7e-170	93.47	ribosomal protein S4 [Styphnolobium japonicum] >AXQ37248.1 ribosomal protein S4 ...	[more]

BLAST of Lag0007283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q31708	1.7e-139	83.96	Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1...	[more]
P60498	1.0e-104	98.05	NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=...	[more]
P60497	2.0e-97	94.63	NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE...	[more]
Q02500	1.0e-96	90.52	NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 ...	[more]
P26850	3.4e-68	76.47	NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 P...	[more]

BLAST of Lag0007283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6BZG8	5.5e-178	100.00	Ribosomal protein S4 OS=Luffa acutangula OX=56866 GN=rps4 PE=3 SV=1	[more]
A0A0U2N8V3	2.2e-171	94.79	Ribosomal protein S4 (Fragment) OS=Malus hupehensis var. mengshanensis OX=550789...	[more]
A0A385CAP3	8.4e-171	93.47	Ribosomal protein S4 OS=Styphnolobium japonicum OX=3897 GN=rps4 PE=3 SV=1	[more]
A0A2P6P148	1.4e-170	94.19	Putative ribosomal protein S4/S9 OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg04990...	[more]
J9JES1	4.2e-170	94.17	Ribosomal protein S4 OS=Malus domestica OX=3750 GN=rps4 PE=3 SV=1	[more]

BLAST of Lag0007283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07734.1	5.3e-149	87.11	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]
ATMG00290.1	5.3e-149	87.11	mitochondrial ribosomal protein S4	[more]
ATMG00270.1	7.2e-106	98.05	NADH dehydrogenase 6	[more]
AT2G07718.1	6.3e-09	52.05	Cytochrome b/b6 protein	[more]
ATMG00590.1	6.3e-09	52.05	Cytochrome b/b6 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 219..280 e-value: 7.0E-6 score: 35.5
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 222..266 e-value: 5.5E-8 score: 32.4
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 220..271 e-value: 5.96896E-10 score: 53.7926
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 218..304 e-value: 4.4E-12 score: 48.3
IPR042106	NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ	GENE3D	1.20.120.1200		coord: 481..652 e-value: 3.0E-37 score: 129.5
IPR001457	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	PFAM	PF00499	Oxidored_q3	coord: 495..650 e-value: 1.3E-29 score: 102.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..470
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR11831:SF30	RIBOSOMAL PROTEIN S4-RELATED	coord: 133..402
None	No IPR available	PROSITE	PS50889	S4	coord: 222..290 score: 9.451384
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 160..309
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 133..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007283.1	Lag0007283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045903	positive regulation of translational fidelity
biological_process	GO:0005987	sucrose catabolic process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004575	sucrose alpha-glucosidase activity
molecular_function	GO:0003723	RNA binding