Lag0006717 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0006717
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein IQ-DOMAIN 14-like
Locationchr6: 45221606 .. 45222178 (-)
RNA-Seq ExpressionLag0006717
SyntenyLag0006717
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCAATGAAACTTGGAGACCATATAAGAGCAAAAGCGGTCATATAAGTCTTTCACAAATTGAACGGATAGCGAATGAACCAAATGCTGATGCTTGTAGACGAAATCTTTCGATCCCAAAGAGGCAGCAACGGCACAAAAATCACTCCATCTCCACGGAACCGAACACTTCCGAGTACTACGTTTTAGTATCCAAACCAACTGCTGAAACAACCTTATTTTCCATGGATCAGCCAAGGCATTCAGATGTTGTGCCAGATGACTACCCCTTCTATCCAAATTATATGGCCAAGACAGAGTCCTCAAGGGCAAAACTACGGTCCCAGAGTGAACCGAGACAGCGACCCGGCTCGAACGCACAGCTGAAGAGCAAGCAAGCAGAAACAGTTGCCAGAATGAACTTGCCAATGAATGATCAAGTAAGCTCTTTACAAAACCTGAAGCATAATGGCTATGAAAATCACACCAGCCCTTGGTTCATGAAGTTTTATCAGTTCAAAAAATCATCCAAGAACAGAGATGGTGATTCTATTAGCAGTAAGTTCAGTTGTCCCAACAAACCACTTTGA

mRNA sequence

ATGAACCTCAATGAAACTTGGAGACCATATAAGAGCAAAAGCGGTCATATAAGTCTTTCACAAATTGAACGGATAGCGAATGAACCAAATGCTGATGCTTGTAGACGAAATCTTTCGATCCCAAAGAGGCAGCAACGGCACAAAAATCACTCCATCTCCACGGAACCGAACACTTCCGAGTACTACGTTTTAGTATCCAAACCAACTGCTGAAACAACCTTATTTTCCATGGATCAGCCAAGGCATTCAGATGTTGTGCCAGATGACTACCCCTTCTATCCAAATTATATGGCCAAGACAGAGTCCTCAAGGGCAAAACTACGGTCCCAGAGTGAACCGAGACAGCGACCCGGCTCGAACGCACAGCTGAAGAGCAAGCAAGCAGAAACAGTTGCCAGAATGAACTTGCCAATGAATGATCAAGTAAGCTCTTTACAAAACCTGAAGCATAATGGCTATGAAAATCACACCAGCCCTTGGTTCATGAAGTTTTATCAGTTCAAAAAATCATCCAAGAACAGAGATGGTGATTCTATTAGCAGTAAGTTCAGTTGTCCCAACAAACCACTTTGA

Coding sequence (CDS)

ATGAACCTCAATGAAACTTGGAGACCATATAAGAGCAAAAGCGGTCATATAAGTCTTTCACAAATTGAACGGATAGCGAATGAACCAAATGCTGATGCTTGTAGACGAAATCTTTCGATCCCAAAGAGGCAGCAACGGCACAAAAATCACTCCATCTCCACGGAACCGAACACTTCCGAGTACTACGTTTTAGTATCCAAACCAACTGCTGAAACAACCTTATTTTCCATGGATCAGCCAAGGCATTCAGATGTTGTGCCAGATGACTACCCCTTCTATCCAAATTATATGGCCAAGACAGAGTCCTCAAGGGCAAAACTACGGTCCCAGAGTGAACCGAGACAGCGACCCGGCTCGAACGCACAGCTGAAGAGCAAGCAAGCAGAAACAGTTGCCAGAATGAACTTGCCAATGAATGATCAAGTAAGCTCTTTACAAAACCTGAAGCATAATGGCTATGAAAATCACACCAGCCCTTGGTTCATGAAGTTTTATCAGTTCAAAAAATCATCCAAGAACAGAGATGGTGATTCTATTAGCAGTAAGTTCAGTTGTCCCAACAAACCACTTTGA

Protein sequence

MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSEYYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQRPGSNAQLKSKQAETVARMNLPMNDQVSSLQNLKHNGYENHTSPWFMKFYQFKKSSKNRDGDSISSKFSCPNKPL
Homology
BLAST of Lag0006717 vs. NCBI nr
Match: XP_038890615.1 (uncharacterized protein LOC120080123 [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 143/192 (74.48%), Postives = 164/192 (85.42%), Query Frame = 0

Query: 1   MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSE 60
           MN+NE  RPYK+KSGHIS SQIE++ NEPNA  CRRNLSIP+RQ +HKNHS+S EP+TSE
Sbjct: 186 MNVNEDLRPYKTKSGHISHSQIEQLENEPNA-YCRRNLSIPRRQHQHKNHSVSIEPDTSE 245

Query: 61  YYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQR--PG 120
           YY+LVSKPTAET L+SMDQPRHSD VPDDY FYPNYMAKTESSRAK+RSQSEP+QR  P 
Sbjct: 246 YYILVSKPTAETALYSMDQPRHSDFVPDDYLFYPNYMAKTESSRAKVRSQSEPKQRPCPT 305

Query: 121 SNAQLKSKQAETVARMNLPMNDQV-SSLQNLKHNGYENHTSPWFMKFYQFKKSSKNRDGD 180
            N+++KSKQ  T  RM+L  NDQ+ SSLQ+LKHNGYENH +PWFMK YQFKK SKNRDGD
Sbjct: 306 PNSRMKSKQIGTADRMSL--NDQIQSSLQSLKHNGYENHNNPWFMKLYQFKKPSKNRDGD 365

Query: 181 SISSKFSCPNKP 190
           S SS+FS P+ P
Sbjct: 366 STSSRFSFPDDP 374

BLAST of Lag0006717 vs. NCBI nr
Match: XP_022142952.1 (protein IQ-DOMAIN 14-like [Momordica charantia])

HSP 1 Score: 272.7 bits (696), Expect = 2.4e-69
Identity = 142/189 (75.13%), Postives = 155/189 (82.01%), Query Frame = 0

Query: 1   MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSE 60
           MNLNE WRPYKSKS HIS SQIE I NEPNA  CRRNLSIPKRQ RHKN SI  EPNTSE
Sbjct: 153 MNLNEHWRPYKSKSSHISHSQIELIENEPNAYICRRNLSIPKRQHRHKNDSIPIEPNTSE 212

Query: 61  YYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQR-PGS 120
           YYVLVSKP AE+ LFSMDQPR+SD +P DYP YP+YMAKTESSRAK+RSQSEP+QR PGS
Sbjct: 213 YYVLVSKPAAESALFSMDQPRNSDSMPHDYPLYPHYMAKTESSRAKVRSQSEPKQRPPGS 272

Query: 121 NAQLKSKQAETVARMNLPMNDQVSSL-QNLKHNGYENHTSPWFMKFYQFKKSSKNRDGDS 180
           +  +KSKQ ETV R +LPMNDQ+ S  QNLKH GYENH S WFMK YQ KK++K RDGDS
Sbjct: 273 SIWMKSKQTETVGRTSLPMNDQIQSYSQNLKHKGYENHNSGWFMKLYQLKKAAKTRDGDS 332

Query: 181 ISSKFSCPN 188
            SSK S P+
Sbjct: 333 TSSKLSRPD 341

BLAST of Lag0006717 vs. NCBI nr
Match: XP_023538254.1 (uncharacterized protein LOC111799089 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 8.5e-67
Identity = 136/189 (71.96%), Postives = 152/189 (80.42%), Query Frame = 0

Query: 1   MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSE 60
           MNL+ETWR YKSKSG+IS SQ+E+I N PNA +CRRNLSIP RQ +HKNHSIS EPN+SE
Sbjct: 184 MNLDETWRSYKSKSGYISRSQVEQIKNGPNACSCRRNLSIPTRQHQHKNHSISIEPNSSE 243

Query: 61  YYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQRPGSN 120
           YYVL+SKPTA  TL SMD PRHSD VPD+YP YPNYMAKTESSRAKLRSQSEPRQRPGS+
Sbjct: 244 YYVLMSKPTANRTLCSMDPPRHSDFVPDEYPCYPNYMAKTESSRAKLRSQSEPRQRPGSS 303

Query: 121 AQLKSKQAETVARMNLPMNDQVSSLQNLKHNGYENHTSPWFMKFYQFKKSSKNRDGDSIS 180
           A  K KQAE             S+LQN+KHNGYE+H+  WFMK YQ  KSSKN DGDS S
Sbjct: 304 AWPKCKQAE-------------SALQNMKHNGYESHSHTWFMKLYQLTKSSKNSDGDSTS 359

Query: 181 SKFSCPNKP 190
           SKFSCP++P
Sbjct: 364 SKFSCPDEP 359

BLAST of Lag0006717 vs. NCBI nr
Match: XP_022937672.1 (protein IQ-DOMAIN 14-like [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 6.1e-65
Identity = 135/189 (71.43%), Postives = 150/189 (79.37%), Query Frame = 0

Query: 1   MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSE 60
           MNL+ET R YKSKSG+IS SQ+E+I N PNA +CRRNLSIP RQ +HKNHSIS EPN SE
Sbjct: 185 MNLDETRRSYKSKSGYISRSQVEQIKNGPNACSCRRNLSIPTRQHQHKNHSISIEPNISE 244

Query: 61  YYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQRPGSN 120
           YYVL+SKPTA  TL SMD PRHSD VPD+YP YPNYMAKTESSRAKLRSQSEPRQRPGS+
Sbjct: 245 YYVLMSKPTANRTLCSMDPPRHSDFVPDEYPCYPNYMAKTESSRAKLRSQSEPRQRPGSS 304

Query: 121 AQLKSKQAETVARMNLPMNDQVSSLQNLKHNGYENHTSPWFMKFYQFKKSSKNRDGDSIS 180
           A  K KQAE             S+LQN+KHNGYE+H+  WFMK YQ  KSSKN DGDS S
Sbjct: 305 AWPKCKQAE-------------SALQNMKHNGYESHSHAWFMKLYQLTKSSKNSDGDSTS 360

Query: 181 SKFSCPNKP 190
           SKFSCP++P
Sbjct: 365 SKFSCPDEP 360

BLAST of Lag0006717 vs. NCBI nr
Match: KAG7021149.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 133/189 (70.37%), Postives = 149/189 (78.84%), Query Frame = 0

Query: 1   MNLNETWRPYKSKSGHISLSQIERIANEPNADACRRNLSIPKRQQRHKNHSISTEPNTSE 60
           MNL+ET R YKSKSG+IS SQ+E+I N PNA +CRRNLSIP RQ +HKN SIS EPN SE
Sbjct: 188 MNLDETRRSYKSKSGYISRSQVEQIKNGPNACSCRRNLSIPTRQHQHKNLSISIEPNISE 247

Query: 61  YYVLVSKPTAETTLFSMDQPRHSDVVPDDYPFYPNYMAKTESSRAKLRSQSEPRQRPGSN 120
           YYVL+SKPTA  TL SMD PRHSD VPD+YP YPNYMAKTESSRAKLRSQSEPRQRPGS+
Sbjct: 248 YYVLMSKPTANRTLCSMDPPRHSDFVPDEYPCYPNYMAKTESSRAKLRSQSEPRQRPGSS 307

Query: 121 AQLKSKQAETVARMNLPMNDQVSSLQNLKHNGYENHTSPWFMKFYQFKKSSKNRDGDSIS 180
           A  K KQAE             ++LQN+KHNGYE+H+  WFMK YQ  KSSKN DGDS S
Sbjct: 308 AWPKCKQAE-------------NALQNMKHNGYESHSHTWFMKLYQLTKSSKNSDGDSTS 363

Query: 181 SKFSCPNKP 190
           SKFSCP++P
Sbjct: 368 SKFSCPDEP 363

BLAST of Lag0006717 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.8e-04
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 89  DYPFYPNYMAKTESSRAKLRSQSEPRQRPGSNAQLKSKQAETVARMNLPMNDQV 143
           DYP +PNYMA T+SS+AK RSQS P+QRP    + K       + M  P N+ V
Sbjct: 320 DYPLFPNYMANTQSSKAKARSQSAPKQRPPEIYE-KQMSGRRRSSMEAPRNNGV 372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890615.16.3e-7074.48uncharacterized protein LOC120080123 [Benincasa hispida][more]
XP_022142952.12.4e-6975.13protein IQ-DOMAIN 14-like [Momordica charantia][more]
XP_023538254.18.5e-6771.96uncharacterized protein LOC111799089 [Cucurbita pepo subsp. pepo][more]
XP_022937672.16.1e-6571.43protein IQ-DOMAIN 14-like [Cucurbita moschata][more]
KAG7021149.12.6e-6370.37Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A1P8B5904.8e-0448.15Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025064Domain of unknown function DUF4005PFAMPF13178DUF4005coord: 68..146
e-value: 5.1E-12
score: 46.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..128
NoneNo IPR availablePANTHERPTHR32295IQ-DOMAIN 5-RELATEDcoord: 53..165
NoneNo IPR availablePANTHERPTHR32295:SF208IQ CALMODULIN-BINDING MOTIF PROTEINcoord: 53..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0006717.1Lag0006717.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005516 calmodulin binding