Lag0006606 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCACTGTGTTTCTCCACTTCAGCCTCTTCCGTTCTTCCATTTCGAAAAACCGTTGGCTCTCCAAATTACACTTCCAATTTTCCCTCCAATTCAAAACCCTCGATTCTCTTCCCCTCCTCATCAAGCTCTCGATTCGCGACGATTTGCAGGCAAAGGATTGAAGGAGATGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTACTGTTTCTCTCTTCCTTTTGCCGCTTGGTTTCTCTCGTTGCTAAGAGAATTGAATTGTACTATCTAGATTTCTTGTAGGATATACATTTGAGTTTTCGGATTATGATTGGGGAGCGAAGTAGTGATTGGCTACTTGGGTTGATTGTAGAGTTTTTATTTTCTGTATGGACTTTCAGTTCGACTTCTGATTTGTGGCTGTATAGGTGAAGCAATTTCATCCGGACGTGTACAGAAATGGGAACGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGGTAGCTATGCATTTATAGAATCAAGAAGAAAGTTGTGTTGTGTTTTTATCTCAGTGACTAATGTTGTTTCTTTTGTAGGATGAACATTATGGGAATCATCATTTATGTTGATCTTAATTTGATTGTTATCTCCGCTTGCTTTACATTGTAAAATTCGAAACTATCTTTCTGCTGTCTCTTTGCTAGTAGGTAAGGCAGTTTAGTTTGCTTAAAGACTCGTAAGGAGATTGTTGATTAACTCTCCTTATATCCTCAAACAACTTCTGGGTTCTTATTGATATGCTTTGAATGATTTGACTCGCAGTCACTAATTAGTGAGAAAATGTGTTTAGAAGTTATTGAAAGAAGGTGTTTAGAGAGAGAAATTAGTGAGAGGAAGTGCATAGAGAGTAATCAAGAAAAATGGTGTCATTAAAGATCAATGATAAAATATTTAAGCCAATAGTACTTGTTTCATTTTTCGTCATTCTCTTTCTTATAATTTTTGGACTTCCATCATAAGAGACCGTAACAAAGTTGGAAGGATTTGTGTTTTGATGACCGGCTTGTTTTATCATCTACGTTGTAGTCAATAATGAAACTCAACAATGACTATGCTTTGTAAAATATGCAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAAAGGTATCGTAGTGCTTTTTGTGTTGATCTCAGGGTGTATAGAACTGCTCAACTTCTTGCGACATTCATCATAGAATAAATTGCGTACAACTTCTTGGAAAGTTTAGGGGAAATTTTTTTGTAAGTAAAAGATGCTTTATAATATATAACAATTGATTACTTTTTACTCAAATTCTACCATATATCAGGGATTAAATTACATTCTTGATAATTTGAAATTCAATGTGGTTTTATGATTTCAAGTTTCAGTTGTTCATTTTTATCACTCTATTTGATGATATATTTATTATTCTTTTTAAAAAAAAAAAAAAATATGAAACTCTCACAATTGAACTTATGAACTCAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTACAATCTTTGATCCAACTTATGAAAGTTACAATTTAAGTTCTTTGTTATGATACAATAATCATGTCCTTCCCACTTATTCTCCTTTGTTTAATGTGTTGTCATAATAATTATGCAGGCTGCCCATATTCTTGTGTGGATAGAGCTCCCCATGTCTTCACTTTTGCTCCTTCCACCGGGACAGCCCGGGCCACTTCTCAAGGTTCGTTTGAGTGATAATGCAATTATAATTTCAGTTTTTTGAGTGCATCACCAAAAGACTTATGCGTGTCATTTTAACGAGGGTCTCTCGATTTATTCCCTGTAATTAGGACATGGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTTTAGAAGAGCTACTTGACAGGTAGAACAATATTGCAATCTATATATATGTTTGAATTATAGAAAGTATAAGTAGATTCATGTTGCCAACAAGAGCATAGCTCAATTGGCATAAAGCATGAACTCTGAAACAAGAGGTCTGAGGATCGAATCTCCCACCCCACATATAGTCAAAAAAAAAAAAAAAAATGTAGATTCACGTTTAAAAACAACCACTCTTCTTATTCATACGGAGAAATGTAATTTGAGATGAGAAATCTCAACCCCTAGAAACTCCAAATCAGATTTTTTTTTCTTTTTTTTTTGGTTGCACTACCATTTTAGATCTTTAGTTGGCACTATTCTTTTTCCTTGCTTTAGCTTTTTAGTAACTGTGGTTTATCTTTGTTTGTATTAGTGCCTTGGATGTACCTTATGATAATTCCGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGA ATGGAGGCACTGTGTTTCTCCACTTCAGCCTCTTCCGTTCTTCCATTTCGAAAAACCGTTGGCTCTCCAAATTACACTTCCAATTTTCCCTCCAATTCAAAACCCTCGATTCTCTTCCCCTCCTCATCAAGCTCTCGATTCGCGACGATTTGCAGGCAAAGGATTGAAGGAGATGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTGAAGCAATTTCATCCGGACGTGTACAGAAATGGGAACGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAAAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGCTGCCCATATTCTTGTGTGGATAGAGCTCCCCATGTCTTCACTTTTGCTCCTTCCACCGGGACAGCCCGGGCCACTTCTCAAGGACATGGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTTTAGAAGAGCTACTTGACAGTGCCTTGGATGTACCTTATGATAATTCCGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGA ATGGAGGCACTGTGTTTCTCCACTTCAGCCTCTTCCGTTCTTCCATTTCGAAAAACCGTTGGCTCTCCAAATTACACTTCCAATTTTCCCTCCAATTCAAAACCCTCGATTCTCTTCCCCTCCTCATCAAGCTCTCGATTCGCGACGATTTGCAGGCAAAGGATTGAAGGAGATGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTGAAGCAATTTCATCCGGACGTGTACAGAAATGGGAACGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAAAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGCTGCCCATATTCTTGTGTGGATAGAGCTCCCCATGTCTTCACTTTTGCTCCTTCCACCGGGACAGCCCGGGCCACTTCTCAAGGACATGGTGAAGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTTTAGAAGAGCTACTTGACAGTGCCTTGGATGTACCTTATGATAATTCCGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGA MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVKQFHPDVYRNGNDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY Homology
BLAST of Lag0006606 vs. NCBI nr
Match: KAA0047985.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 485.3 bits (1248), Expect = 3.3e-133 Identity = 242/267 (90.64%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of Lag0006606 vs. NCBI nr
Match: KGN60912.1 (hypothetical protein Csa_023479 [Cucumis sativus]) HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131 Identity = 240/267 (89.89%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of Lag0006606 vs. NCBI nr
Match: XP_022150755.1 (pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia]) HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131 Identity = 237/269 (88.10%), Postives = 250/269 (92.94%), Query Frame = 0
BLAST of Lag0006606 vs. NCBI nr
Match: XP_038877028.1 (pentatricopeptide repeat-containing protein At3g05340 [Benincasa hispida]) HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129 Identity = 230/244 (94.26%), Postives = 236/244 (96.72%), Query Frame = 0
BLAST of Lag0006606 vs. NCBI nr
Match: XP_023537184.1 (uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537185.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537187.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 470.7 bits (1210), Expect = 8.4e-129 Identity = 237/267 (88.76%), Postives = 244/267 (91.39%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy Swiss-Prot
Match: Q9FMX6 (Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJC76 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.8e-08 Identity = 64/258 (24.81%), Postives = 109/258 (42.25%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy Swiss-Prot
Match: A5W9N6 (Curved DNA-binding protein OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=cbpA PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy Swiss-Prot
Match: Q88DH7 (Curved DNA-binding protein OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=cbpA PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy Swiss-Prot
Match: B1J5W7 (Curved DNA-binding protein OS=Pseudomonas putida (strain W619) OX=390235 GN=cbpA PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy Swiss-Prot
Match: B1ZUS0 (Chaperone protein DnaJ OS=Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) OX=452637 GN=dnaJ PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 23/62 (37.10%), Postives = 34/62 (54.84%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy TrEMBL
Match: A0A5A7U2T5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00480 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133 Identity = 242/267 (90.64%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy TrEMBL
Match: A0A0A0LJM6 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022810 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132 Identity = 240/267 (89.89%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy TrEMBL
Match: A0A6J1D9D8 (pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=3673 GN=LOC111018815 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132 Identity = 237/269 (88.10%), Postives = 250/269 (92.94%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy TrEMBL
Match: A0A6J1FBN2 (uncharacterized protein LOC111443953 OS=Cucurbita moschata OX=3662 GN=LOC111443953 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.4e-128 Identity = 236/267 (88.39%), Postives = 242/267 (90.64%), Query Frame = 0
BLAST of Lag0006606 vs. ExPASy TrEMBL
Match: A0A6J1HMW8 (uncharacterized protein LOC111465640 OS=Cucurbita maxima OX=3661 GN=LOC111465640 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 1.0e-127 Identity = 234/267 (87.64%), Postives = 243/267 (91.01%), Query Frame = 0
BLAST of Lag0006606 vs. TAIR 10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 308.5 bits (789), Expect = 5.1e-84 Identity = 158/240 (65.83%), Postives = 192/240 (80.00%), Query Frame = 0
BLAST of Lag0006606 vs. TAIR 10
Match: AT2G42750.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-14 Identity = 67/226 (29.65%), Postives = 103/226 (45.58%), Query Frame = 0
BLAST of Lag0006606 vs. TAIR 10
Match: AT5G23240.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-09 Identity = 64/258 (24.81%), Postives = 109/258 (42.25%), Query Frame = 0
BLAST of Lag0006606 vs. TAIR 10
Match: AT1G80920.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Lag0006606 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 42.0 bits (97), Expect = 9.0e-04 Identity = 36/125 (28.80%), Postives = 58/125 (46.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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