Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAAGGATTGTGGGGAAGTGAACTTAGTCGATCAGTCACAATGCCCTGTCTTGAACTATGGAGATTGGCTGAGATTTGACGCAAAGGGTGCAATGTTAGCTGGGATGCCGCTGGCGGGGATTTCAGCTGAGCTCGGAATCCTCAAATCAATCTTAGGAGGCCTTCAGTGGTGAAGTCATTGTTACAGTTTAACATCTCAAACAGAGATCTGAAGCTGAATCCTCGTAGCAGCTATGGAAGGCAATCAACGTCGGTTAGTAAAACGGCTTGGTACTCCTTTTCTGGAAATGCTCGTCCTCAAGATAAAGGCAAAGCAAAAATTGATGATTGCTTAACGGTGATGATGCAGAAGCAGTGGGTTGCAATGGGGAAGTGGAATCCATCATCTTCTTCGTCTAAGGGGTTGGCGACAGACGTAGGTTTTCCGGCAAAGATGGAGATTCTGGGCAACTCCCAGACGGCTACGGTTCCAGCGGAGGAATTAAATGAAATGGAGCGGTGTAACCGAATTATTAATAATGTCTTTAATGACATTATCTCTCAGCAAACAGAGAAGGAAACGATTGGGTTTAATCCCCTTAATTCATGGGTCAATGGAATTGATTAAAGGATTCAGCCCGTTGTTGCAGCAAATGGTGGTGCAGGTTCGAGCAAAGAAGGGAAGGTAAAATGGCCAGGAATCTCATGGAAAAAACGTGCTAGAGCGAGATTTGTTCCTTCCAGGTTAAGTTTAGCATCGATTGAGGAATTCCACTAGTGCAAGAATGGTCCTATTCTTTTTTCTCCTGAGACGAATCATTCCTAATGATTGTAATAAGGTTGGATCTGCTGAGCAGACCCGCCTGAATCCATGAAAACTTTGTGTTGGAATGTCCGTGGATTGGGGAGTCCATGGACATCCTGTAGTGTCTACGATGGGTTAAGTTGATTATGTCCCCATCTTTATTTCCTGTCCGAGACTAAGTGTTCGTCTTTTATTTTGAATAAAATGAAGCTACGGTTGAATTATTCTGGGTGCCTTATAGATAATAGAATTGGTCTAAGTGGTGGATTATGTTTGTTATGGAAGGATGATGTAGATGTGACAATTCGTAGTTATTCGGTCCATCATATTGATGCCTATATTGTGTGACAAAATTTAGGGTGGAGGTTTACTGGTATTTATGGTCAACCTGATTCTTCTTTGCGTTCGCAAACTTGGGACCTTATAAGGCGTATTCAGAATAACGACGATTCTCCTTGGGTCATAGGAGGGGATTTCAATGAGATATTGTGGGATCACGAGAAAGCAGGTGGGCCAATGAGGGATCGTCGCTTAATCCAAAATTTCAGGGAAACTTTAGATGATTGTGGATTACGTGATCTAGAGTGTCAGGGAGTCATCTATACATGGTGTAATAGTCGTTTATTGGGCAACCAAGTAAAACCGATAGAACTTTGTTTGCATGGCGAGACTTATGGAAGGAGTTGGAGATGGGATTCCAAACCTTTCAAGTTCGAGGAATTCTGGACTCGAGATAAGGAATGCCAACATATTATTAGCAAGGTGGGATTGTGGGAAGTTATGGATAGTAGAGGCTCCACTCTCCAACAGAACTTAAGTGTGTGTGCCTCGGCTTTACAAAGGTGGGGTCACTGGCAATTTTTGTCTCGGCGAGAAAACATTCGGAAAGCTAAGGCTCAACTTAAAGAGGAATATGGTAGACCGTTGCCATTAGTTTTTTGGAAGATCCGTCAGATTGAGGATCAGAAAGCTTCATCCAGGAGGAAGCGAAATGAGATTCGGGGTGTGATGGATGAGCATGGCATCTGGCATGAGAATATTGAGGAAATTCGTCATGTTTTTGAAGATTATTTCAAGGACATTTTTAGTACAAAACACCCGTCTTCTAAAGATCTAGATAAGGTTCTGAAACATATTCCACGACGAGTTACCCCGGAAATGAGTCGATATCTGAATACAGAATACTCTCGTGAAGAGGTGGAGAGGGCAATCAAGAATTTCCATCCTACTAAGGCTCCTGGCCTAGATGGGTTTCCTGCTCTGTTTTATCAAAAGTACTGGGAGATTGTTGGTCCTAGAACTGTGGACAACTGCCTCGCTATTCTCAACAGAAAGCAATCTATCAAGGACTGGAATCATACGAATTTGGTTCTTATTCCAAAAAAGCGGCAAGCGAGGTTAGTTTCAGACTATCGACCTATTAGTTTATGTAATGTTTCATATAAAATTGTTACAAAGGTTATTGCGAATCGGCTGAGGAATGGGCTTAAGACTATTATAGATGATTGCCAGTCAGCATTTATCCCAGGTCGATCTATTTTGATAATATGATTATAGGTCATGAAACATTACACTTTCTTAAAAATAAGAAAAGAGGAAAAAAAAAGGTTTTGCAGCCATGAAATTAGACATGAGTAAAGCCTATGACAGAGTAAAATGATCTTATCTTATTGCAGTAATGGATAAATTAGGATTTCCTACTGATTTGGTGGAGTTAATTCAGGACTGCATTTCGTCTACTTCCTTTTCCATTATTGTTAATGGGGAGGCACGTGGGTGTTTTGGGGCTTCAAGGGGTTTATGACAGGGGGATCCATTATCTCCTTATTTATTCTTGCTCTGCTCTGAAGGGTTATCTTTTATGTTAGCAAATGCTAGAAATATAACAGGGCTGGTATTTTGATCGCCTCAACAGCTCCCAAGGTATCTCACCTATTCTTTGCGGATGATAGTCTTATTTTCCTCAAAGCACAGGCTTCAAAGTTTGGTCATTTTAAAGTTATCATGGAAGAATATGAGAGGGCTTTGGGTCAATGTACAAATCTGGTCAAATCGATGGTATGTTTTTCTAAAAATGTGCCAGAAGAAACAAGAGCATACCTTGGTTCAAAATTGAAGATGCAGGTGGTGGATAATCTGGGGTCTTATTTGGGGTTGCCATCATCTTTCCAAAGAGGGAAAAGCAAAGATTTTCAAAGCATTATGGATAAGGTGTGGACTACTTTGCAAGGGTTGAAGGAAAGGTTTTTATTTTTTTAATGGGTGGTGAGGAGATCCTCATTAAAAGTATTGTTCAGGCTATCCCTTCATATGCTATGAGGTGTTTTCGACTGCCAAAAGGGTTCTTATCCAAAATTGCGGCTTTATGTGCTAAGTTTTAGTGGGGCTCATCGGAAATGAAACATCGTATCCATTAGCGTAAGTGGGAGGAATTATGCAAACCCAAGGAAGTTGAGATGGATATCAAAGATAAATGGTTACACCTTAGCTCATGTGTGTCTACTGAAGTTTTTGAGTAGATTTGTGTTATTGCTTGGACTGTTTGGAGTGATCGAAACAATATTATGCACAATAAGCTGACTTCTCCTGTGGAAATCAAGTGTGAATGGATCAATGGATACCTGTTCGAGTTCAAAAGTGCAAACCAACAGAAAAGAAGGAAGAAGCAATCTGAACAGGATGTCCGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCTGCATGTAATTTTGATAATTGTCGTTGTGGAATTGGTATTGTGCTCCGTGATCGGAAGGATCATTTGGAGTGTGCGATGCATCAAGGTTTGAATACTTTTACTTCTTTGTTATGTGCTTAAGCGATGACCATACTTGAAGGTATGAAGATAGCAATCCAAAATGGAGTACAACGTTTAACTATTTTTTTAGATTCTTTAGCTTTGATCTCCATTATTTTGCGGAAGGAACGATGCACAATGGACTGTTCTACAATCTTTTGGGATATTGAGTTTCTTCGAGGTTCGTTTCAAGATATCTCTTTCTTTCATGCAAATCGCGAGTTTAATTATTTGACAAATGTTGTAGCCTGTACAGGGTTGTATGCTTCACCACAGATGTGGTTCTCAGACTATCCAGAGTGGATAGTACGTTTCACTCATTGTGAGCAACGTTTATTGTAA
mRNA sequence
ATGCTCAAGGATTGTGGGGAAGTGAACTTAGTCGATCAGTCACAATGCCCTGTCTTGAACTATGGAGATTGGCTGAGATTTGACGCAAAGGGTGCAATGTTAGCTGGGATGCCGCTGGCGGGGATTTCAGCTGAGCTCGGAATCCTCAAATCAATCTTAGGAGGCCTTCAGTGCTATGGAAGGCAATCAACGTCGGTTAGTAAAACGGCTTGGTACTCCTTTTCTGGAAATGCTCGTCCTCAAGATAAAGGCAAAGCAAAAATTGATGATTGCTTAACGGTGATGATGCAGAAGCAGTGGGTTGCAATGGGGAAGTGGAATCCATCATCTTCTTCGTCTAAGGGGTTGGCGACAGACGTAGGTTTTCCGGCAAAGATGGAGATTCTGGGCAACTCCCAGACGGCTACGGTTCCAGCGGAGGAATTAAATGAAATGGAGCGGATTCAGCCCGTTGTTGCAGCAAATGGTGGTGCAGACCCGCCTGAATCCATGAAAACTTTGTGTTGGAATGTCCGTGGATTGGGGAGTCCATGGACATCCTGGTGGAGGTTTACTGGTATTTATGGTCAACCTGATTCTTCTTTGCGTTCGCAAACTTGGGACCTTATAAGGCGTATTCAGAATAACGACGATTCTCCTTGGGTCATAGGAGGGGATTTCAATGAGATATTGTGGGATCACGAGAAAGCAGGTGGGCCAATGAGGGATCGTCGCTTAATCCAAAATTTCAGGGAAACTTTAGATGATTGTGGATTACGTGATCTAGAGTGTCAGGGAGTCATCTATACATGGTGTAATAGTCGTTTATTGGGCAACCAAGTAAAACCGATAGAACTTTGTTTGCATGGCGAGACTTATGGAAGGAGTTGGAGATGGGATTCCAAACCTTTCAAGTTCGAGGAATTCTGGACTCGAGATAAGGAATGCCAACATATTATTAGCAAGGTGGGATTGTGGGAAGTTATGGATAGTAGAGGCTCCACTCTCCAACAGAACTTAAGTGTGTGTGCCTCGGCTTTACAAAGGTGGGGTCACTGGCAATTTTTGTCTCGGCGAGAAAACATTCGGAAAGCTAAGGCTCAACTTAAAGAGGAATATGGTAGACCGTTGCCATTAGTTTTTTGGAAGATCCGTCAGATTGAGGATCAGAAAGCTTCATCCAGGAGGAAGCGAAATGAGATTCGGGGTGTGATGGATGAGCATGGCATCTGGCATGAGAATATTGAGGAAATTCGTCATGTTTTTGAAGATTATTTCAAGGACATTTTTAGTACAAAACACCCGTCTTCTAAAGATCTAGATAAGGTTCTGAAACATATTCCACGACGAGTTACCCCGGAAATGAGTCGATATCTGAATACAGAATACTCTCGTGAAGAGGTGGAGAGGGCAATCAAGAATTTCCATCCTACTAAGGCTCCTGGCCTAGATGGGTTTCCTGCTCTGTTTTATCAAAAGTACTGGGAGATTGTTGGTCCTAGAACTGTGGACAACTGCCTCGCTATTCTCAACAGAAAGCAATCTATCAAGGACTGGAATCATACGAATTTGGTTCTTATTCCAAAAAAGCGGCAAGCGAGGGCTGGTATTTTGATCGCCTCAACAGCTCCCAAGGTATCTCACCTATTCTTTGCGGATGATAGTCTTATTTTCCTCAAAGCACAGGCTTCAAAGTTTGGTCATTTTAAAGTTATCATGGAAGAATATGAGAGGGCTTTGGGTCAATGTACAAATCTGGTCAAATCGATGGTATGTTTTTCTAAAAATGTGCCAGAAGAAACAAGAGCATACCTTGGTTCAAAATTGAAGATGCAGGTGGTGGATAATCTGGGGTCTTATTTGGGGTTGCCATCATCTTTCCAAAGAGGGAAAAGCAAAGATTTTCAAAGCATTATGGATAAGATTTGTGTTATTGCTTGGACTGTTTGGAGTGATCGAAACAATATTATGCACAATAAGCTGACTTCTCCTGTGGAAATCAAGTGTGAATGGATCAATGGATACCTGTTCGAGTTCAAAAGTGCAAACCAACAGAAAAGAAGGAAGAAGCAATCTGAACAGGATGTCCGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCTGCATGTAATTTTGATAATTGTCGTTGTGGAATTGGTATTGTGCTCCGTGATCGGAAGGATCATTTGGAGTGTGCGATGCATCAAGATTCTTTAGCTTTGATCTCCATTATTTTGCGGAAGGAACGATGCACAATGGACTGTTCTACAATCTTTTGGGATATTGAGTTTCTTCGAGGGTTGTATGCTTCACCACAGATGTGGTTCTCAGACTATCCAGAGTGGATAGTACGTTTCACTCATTGTGAGCAACGTTTATTGTAA
Coding sequence (CDS)
ATGCTCAAGGATTGTGGGGAAGTGAACTTAGTCGATCAGTCACAATGCCCTGTCTTGAACTATGGAGATTGGCTGAGATTTGACGCAAAGGGTGCAATGTTAGCTGGGATGCCGCTGGCGGGGATTTCAGCTGAGCTCGGAATCCTCAAATCAATCTTAGGAGGCCTTCAGTGCTATGGAAGGCAATCAACGTCGGTTAGTAAAACGGCTTGGTACTCCTTTTCTGGAAATGCTCGTCCTCAAGATAAAGGCAAAGCAAAAATTGATGATTGCTTAACGGTGATGATGCAGAAGCAGTGGGTTGCAATGGGGAAGTGGAATCCATCATCTTCTTCGTCTAAGGGGTTGGCGACAGACGTAGGTTTTCCGGCAAAGATGGAGATTCTGGGCAACTCCCAGACGGCTACGGTTCCAGCGGAGGAATTAAATGAAATGGAGCGGATTCAGCCCGTTGTTGCAGCAAATGGTGGTGCAGACCCGCCTGAATCCATGAAAACTTTGTGTTGGAATGTCCGTGGATTGGGGAGTCCATGGACATCCTGGTGGAGGTTTACTGGTATTTATGGTCAACCTGATTCTTCTTTGCGTTCGCAAACTTGGGACCTTATAAGGCGTATTCAGAATAACGACGATTCTCCTTGGGTCATAGGAGGGGATTTCAATGAGATATTGTGGGATCACGAGAAAGCAGGTGGGCCAATGAGGGATCGTCGCTTAATCCAAAATTTCAGGGAAACTTTAGATGATTGTGGATTACGTGATCTAGAGTGTCAGGGAGTCATCTATACATGGTGTAATAGTCGTTTATTGGGCAACCAAGTAAAACCGATAGAACTTTGTTTGCATGGCGAGACTTATGGAAGGAGTTGGAGATGGGATTCCAAACCTTTCAAGTTCGAGGAATTCTGGACTCGAGATAAGGAATGCCAACATATTATTAGCAAGGTGGGATTGTGGGAAGTTATGGATAGTAGAGGCTCCACTCTCCAACAGAACTTAAGTGTGTGTGCCTCGGCTTTACAAAGGTGGGGTCACTGGCAATTTTTGTCTCGGCGAGAAAACATTCGGAAAGCTAAGGCTCAACTTAAAGAGGAATATGGTAGACCGTTGCCATTAGTTTTTTGGAAGATCCGTCAGATTGAGGATCAGAAAGCTTCATCCAGGAGGAAGCGAAATGAGATTCGGGGTGTGATGGATGAGCATGGCATCTGGCATGAGAATATTGAGGAAATTCGTCATGTTTTTGAAGATTATTTCAAGGACATTTTTAGTACAAAACACCCGTCTTCTAAAGATCTAGATAAGGTTCTGAAACATATTCCACGACGAGTTACCCCGGAAATGAGTCGATATCTGAATACAGAATACTCTCGTGAAGAGGTGGAGAGGGCAATCAAGAATTTCCATCCTACTAAGGCTCCTGGCCTAGATGGGTTTCCTGCTCTGTTTTATCAAAAGTACTGGGAGATTGTTGGTCCTAGAACTGTGGACAACTGCCTCGCTATTCTCAACAGAAAGCAATCTATCAAGGACTGGAATCATACGAATTTGGTTCTTATTCCAAAAAAGCGGCAAGCGAGGGCTGGTATTTTGATCGCCTCAACAGCTCCCAAGGTATCTCACCTATTCTTTGCGGATGATAGTCTTATTTTCCTCAAAGCACAGGCTTCAAAGTTTGGTCATTTTAAAGTTATCATGGAAGAATATGAGAGGGCTTTGGGTCAATGTACAAATCTGGTCAAATCGATGGTATGTTTTTCTAAAAATGTGCCAGAAGAAACAAGAGCATACCTTGGTTCAAAATTGAAGATGCAGGTGGTGGATAATCTGGGGTCTTATTTGGGGTTGCCATCATCTTTCCAAAGAGGGAAAAGCAAAGATTTTCAAAGCATTATGGATAAGATTTGTGTTATTGCTTGGACTGTTTGGAGTGATCGAAACAATATTATGCACAATAAGCTGACTTCTCCTGTGGAAATCAAGTGTGAATGGATCAATGGATACCTGTTCGAGTTCAAAAGTGCAAACCAACAGAAAAGAAGGAAGAAGCAATCTGAACAGGATGTCCGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCTGCATGTAATTTTGATAATTGTCGTTGTGGAATTGGTATTGTGCTCCGTGATCGGAAGGATCATTTGGAGTGTGCGATGCATCAAGATTCTTTAGCTTTGATCTCCATTATTTTGCGGAAGGAACGATGCACAATGGACTGTTCTACAATCTTTTGGGATATTGAGTTTCTTCGAGGGTTGTATGCTTCACCACAGATGTGGTTCTCAGACTATCCAGAGTGGATAGTACGTTTCACTCATTGTGAGCAACGTTTATTGTAA
Protein sequence
MLKDCGEVNLVDQSQCPVLNYGDWLRFDAKGAMLAGMPLAGISAELGILKSILGGLQCYGRQSTSVSKTAWYSFSGNARPQDKGKAKIDDCLTVMMQKQWVAMGKWNPSSSSSKGLATDVGFPAKMEILGNSQTATVPAEELNEMERIQPVVAANGGADPPESMKTLCWNVRGLGSPWTSWWRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQNFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSWRWDSKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQNLSVCASALQRWGHWQFLSRRENIRKAKAQLKEEYGRPLPLVFWKIRQIEDQKASSRRKRNEIRGVMDEHGIWHENIEEIRHVFEDYFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARAGILIASTAPKVSHLFFADDSLIFLKAQASKFGHFKVIMEEYERALGQCTNLVKSMVCFSKNVPEETRAYLGSKLKMQVVDNLGSYLGLPSSFQRGKSKDFQSIMDKICVIAWTVWSDRNNIMHNKLTSPVEIKCEWINGYLFEFKSANQQKRRKKQSEQDVRQMISQGQNLIMHVDAACNFDNCRCGIGIVLRDRKDHLECAMHQDSLALISIILRKERCTMDCSTIFWDIEFLRGLYASPQMWFSDYPEWIVRFTHCEQRLL
Homology
BLAST of Lag0005648 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 260.0 bits (663), Expect = 6.7e-65
Identity = 168/518 (32.43%), Postives = 255/518 (49.23%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR +GIYG P++ + TW L+RR+ PW+ GDFNEIL +EK GG R+ ++
Sbjct: 54 WRCSGIYGHPETIQKRHTWTLLRRLAGMFTWPWLCFGDFNEILHPNEKLGGKDRNLDMVA 113
Query: 242 NFRETLDDCGLRDLECQGVIYTWCN------------SRLLGNQ---------------- 301
FRET++DC L DL C+G +TW N R LG++
Sbjct: 114 AFRETVNDCNLIDLGCRGYPFTWSNRRFGPQLIEERLDRFLGSKDWEQSPYNLIVSNLDT 173
Query: 302 ----VKPIELCLHGETYGRSWRWDSKPFKF-EEFWTRDKECQHIIS----KVGLWEVMDS 361
P+ L + ++ +S P F E+ W+ + C++I+ K G W D
Sbjct: 174 WCSDHSPVMLEMQERNKFAWYKKNSSPRVFYEDMWSHYEVCKNIVKEEWLKGGSWSQGDP 233
Query: 362 RGSTLQQNLSVCASALQRWGHWQFLSRRENIRKAKAQLK------------------EEY 421
+ ++ + C + L+ W +F ++E +++ K +L EE
Sbjct: 234 -VTIFKKTSNNCLAQLRIWSRNEFDGQKEKLKQLKKKLSEMKHNFTQREEVSEIKSTEEQ 293
Query: 422 GRPLPL---VFWKIRQIED-------------QKASSRRKRNEIRGVMDEHGIWHENIEE 481
+ L V+WK R D KASSR+++N I GVMD+H +W ++ E
Sbjct: 294 IEKMLLDEEVYWKQRSRADWLKEGDKNTKYFHSKASSRKRKNRIWGVMDQHDVWVDDREG 353
Query: 482 IRHVFEDYFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHP 541
+ F +YF +F+T PS K ++ L + RVT EM+ L++ ++ EEV A+ P
Sbjct: 354 VEKQFCEYFASLFTTSSPSEKQIEAALAGLKPRVTLEMNNQLDSPFTEEEVSTALSQMCP 413
Query: 542 TKAPGLDGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARAGI 601
TKAPG DG PA F+QK+W+ V + CL ILN +++ +NL++ ++++ GI
Sbjct: 414 TKAPGPDGLPAAFFQKHWDSVKLGVISTCLHILNGREAF-----SNLLVQAEQQRHIHGI 473
Query: 602 LIASTAPKVSHLFFADDSLIFLKAQASKFGHFKVIMEEYERALGQCTNLVKSMVCFSKNV 629
A KVSHL FADDSLIF +A H K + E Y +A GQ N KS + FSK
Sbjct: 474 HFGKDA-KVSHLLFADDSLIFTRAAVEDCKHLKALFECYGKASGQIFNFEKSSMFFSKGT 533
BLAST of Lag0005648 vs. NCBI nr
Match:
XP_024033484.1 (uncharacterized protein LOC112095607 [Citrus clementina])
HSP 1 Score: 258.5 bits (659), Expect = 1.9e-64
Identity = 163/495 (32.93%), Postives = 243/495 (49.09%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
+R +Y P+ + W L+RR+ PW+ GDFNE+L +EK GG R+ LI+
Sbjct: 57 FRCNSVYDHPEVGQKKHIWTLLRRLAGLSLLPWLCFGDFNEVLHPYEKTGGNERELSLIR 116
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSW-RWDSKPFKFE 301
N RE L DC L D+ +G +TW N R + ++ G G W R S +E
Sbjct: 117 NDREALRDCNLVDMGYKGYPFTWNNGRYGPHYIEE----RLGRGRGLCWKRKKSTRIHYE 176
Query: 302 EFWTRDKECQHII----SKVGLWEVMDSRGSTL-QQNLSVCASALQRWGHWQFLSRRENI 361
+ W+ + C+ II S G W D+ L Q+ + + L W +F R + +
Sbjct: 177 DLWSPYEACKEIIKTEWSSYGSWN--DANPIPLFQKVVKESMARLLLWSKEEFGEREKKL 236
Query: 362 RKAKAQ---LKEEY-----GRPLPLV-------------FWKIRQIED------------ 421
++ Q LK+ Y G + + FWK R +
Sbjct: 237 KQIMNQLERLKQSYVQYDSGEEIKKLEGQIHDILINEEKFWKQRSRAEWLKAGDKNTKYF 296
Query: 422 -QKASSRRKRNEIRGVMDEHGIWHENIEEIRHVFEDYFKDIFSTKHPSSKDLDKVLKHIP 481
KASSR+K+N I G+ + G W + EE+ + F +YF +F+T PS +++ L+ I
Sbjct: 297 HYKASSRKKKNRIWGIENGSGSWTDKAEEVEYEFCEYFAKLFTTSQPSQEEISAALEGIT 356
Query: 482 RRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDGFPALFYQKYWEIVGPRTVDNCLA 541
RV+ M+ L ++ E++ A+ PTKAPG DG PA FYQK+W +V + + CL
Sbjct: 357 PRVSEAMNEQLEQPFTLEDITEALAQMSPTKAPGPDGLPAAFYQKHWNVVKKKVITTCLH 416
Query: 542 ILNRKQSIKDWNHTNLVLIPK-KRQARAGILIASTAPKVSHLFFADDSLIFLKAQASKFG 601
ILN + ++ NHT + L+PK +RQ L +SHL FADDSLIF++A G
Sbjct: 417 ILNEQGTMAPLNHTYIALVPKAERQKLIHGLSFGKDINISHLLFADDSLIFIRASPMDCG 476
Query: 602 HFKVIMEEYERALGQCTNLVKSMVCFSKNVPEETRAYLGSKLKMQVVDNLGSYLGLPSSF 636
+ K I + Y A GQ NL KS + FSKN E + + + ++ VV YLGLPS
Sbjct: 477 NLKRIFDSYTTASGQLFNLEKSSMFFSKNTKVEEISAIQNIFQLNVVSRHEKYLGLPSMI 536
BLAST of Lag0005648 vs. NCBI nr
Match:
OMO83127.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 246.1 bits (627), Expect = 9.9e-61
Identity = 164/560 (29.29%), Postives = 251/560 (44.82%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WRFTG YG+P++ R+++W L+R + +N PW+ GDFNEIL EK GG +R R ++
Sbjct: 577 WRFTGFYGRPETHRRNESWQLLRTLNSNSSLPWLCTGDFNEILQSDEKVGGVIRPFRQME 636
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSWRWD-------- 301
FR +++C L G TW + ++ G + L R+W WD
Sbjct: 637 GFRSIVEECQFLHLPVVGPFLTW-HKKINGEWIFE---RLDRVLVTRAW-WDRFRHSIEK 696
Query: 302 --------------------------SKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGS 361
+ FKFE+ WT K+ ++ W + +
Sbjct: 697 HLVTTVSDHLPLLISIKEQQGIFTNRQRNFKFEKMWTGHKDFDRVVR--DSW--FSNSTN 756
Query: 362 TLQQNLSVCASALQRWGHWQFLSRRENI---RKAKAQLKEEYGRPLPL------------ 421
+ + C+ L W F + R N+ RK L E P +
Sbjct: 757 AIVDKIWNCSRVLDDWNKRIFGNIRFNLESKRKELVALYREQSDPDRMEECQFEMDGLLH 816
Query: 422 ---VFWKIR-------------QIEDQKASSRRKRNEIRGVMDEHGIWHENIEEIRHVFE 481
V W+ R + A++RRK+N I G+ D + +W ++++ +
Sbjct: 817 QEEVMWRQRSKALWLREGDRNTKYFHSVANARRKKNVILGIEDFNCMWRTEVKDVEEIVC 876
Query: 482 DYFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGL 541
+Y++D+F++ P+ L+ V+ H+P RV +M L+ ++ EE++ A+ KAPG
Sbjct: 877 NYYQDMFTSTTPTMAALNPVISHVPTRVDADMRCSLDAPFTSEEIKDAVFQLEADKAPGP 936
Query: 542 DGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARA-------- 601
DGFP FY K W IVG V L LN ++ D NHTN+VLI K +
Sbjct: 937 DGFPPSFYHKCWHIVGKDVVAFALDFLNNGGNLPDVNHTNIVLIAKNNNPKTMKDYRPIV 996
Query: 602 --------------------------GILIASTAPKVSHLFFADDSLIFLKAQASKFGHF 641
G+ I TAP++SHLFF DDSL+FL A
Sbjct: 997 LCNVIFKIISKAIANRLKADNSNVIHGVAINRTAPRISHLFFTDDSLLFLWACLEDCTAV 1056
BLAST of Lag0005648 vs. NCBI nr
Match:
XP_030958763.1 (uncharacterized protein LOC115980674 [Quercus lobata])
HSP 1 Score: 243.8 bits (621), Expect = 4.9e-60
Identity = 177/613 (28.87%), Postives = 279/613 (45.51%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR TG YG P + R ++WDL++ + PW+ GDFNEI+ EK GG R ++ +
Sbjct: 126 WRITGFYGNPKTHQRKESWDLLKSLSQKYQLPWLCFGDFNEIVSVEEKLGGVQRSQKQMD 185
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSR------------------------------LLG 301
FRE + C +DL G +TWCN + L+
Sbjct: 186 EFREAIHHCRFKDLGYYGPEFTWCNMQEDESRLYLRLDRALATPEWVDHYKNIKVHHLME 245
Query: 302 NQVKPIELCLHGETYGRSWRWDSKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQ 361
+ L + + + + + + F+FE W R +EC++II +V + S +
Sbjct: 246 STSDHCALLISDDIFVQK-HSNQRRFQFEAMWARREECKNIIQEVWDGSQELNSPSGIAA 305
Query: 362 NLSVCASALQRWGHWQFLSRRENIRKAKAQLKE--------EYGRPLPLVFWKIRQIEDQ 421
LS CA L RW F + I+K + L G + ++ +I ++ D
Sbjct: 306 RLSHCAKNLSRWNKMVFGQIPKQIQKKREILSTLVCRDKDGSLGSEINVIRKEINELLDS 365
Query: 422 --------------------------KASSRRKRNEIRGVMDEHGIWHENIEEIRHVFED 481
KAS RR+RN I +MDE+G WHE+I+ I V
Sbjct: 366 EEIMCHQRSKVQWLGLGDRNTKYFHTKASDRRRRNTINSIMDENGNWHESIDGIVEVVVS 425
Query: 482 YFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGLD 541
YFK+++ST +P+ + +VL IP +VT +M++ L E++REEVE A+K HPTKA
Sbjct: 426 YFKNLYSTSYPT--HILEVLDTIPTKVTEDMNQRLIQEFTREEVEAALKQMHPTKAQ--- 485
Query: 542 GFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARAGILIASTAP 601
+ Y+ VG R D + + ++L+ Q +G+ I P
Sbjct: 486 ------VRMYYSFVGLRQGDPISPYI---FLLCTDGFSSLINNAAMNQRISGVSICRGCP 545
Query: 602 KVSHLFFADDSLIFLKAQASKFGHFKVIMEEYERALGQCTNLVKSMVCFSKNVPEETRAY 661
K++HLFFADDSL+F KA + + +++ YE A GQ N KS V F+ N P + R
Sbjct: 546 KITHLFFADDSLLFCKANSQECQTLIDVLQLYEAASGQKINADKSSVFFNSNTPNDRRCE 605
Query: 662 LGSKLKMQVVDNLGSYLGLPSSF-------QRGKSKDFQSIMDKICVIAWTVWSDRNNIM 721
+ + L YLGLPS + G S D + AW +W +RN I+
Sbjct: 606 VLNMLGPMQDTQHKKYLGLPSIIDIAMKLVELGTSCDLEVFFR----AAWAIWYNRNKIV 665
Query: 722 HNKLTS-PVEIKCEWINGYLFEFKSANQQKRRKKQSEQDVRQMISQGQNLIMHVDAACNF 723
H + P +I C + Y+ EFKSA+ + ++ D + + + ++VD A +
Sbjct: 666 HETSSQHPDQIWC-FAEKYIREFKSAS-IICSQGSAKTDGKWIAPPPGYVKINVDGATSK 717
BLAST of Lag0005648 vs. NCBI nr
Match:
OMO96399.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 235.3 bits (599), Expect = 1.8e-57
Identity = 178/656 (27.13%), Postives = 265/656 (40.40%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR TG YG+P++S R ++WDL+R++ PW+ GDFNEIL + EK GGP R +R ++
Sbjct: 63 WRLTGFYGRPETSRRHESWDLLRQLSEQSTLPWMCVGDFNEILTNDEKIGGPPRSQRQME 122
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSW---RWDSKPFK 301
FR T++ C RDL +G + TW SRL+ ++ L LH E + W ++ + F+
Sbjct: 123 MFRATVEFCEFRDLPIKGPLMTW--SRLMSSESD--HLPLHIEILDKPWVGIHYNHR-FR 182
Query: 302 FEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQNLSVCASALQRWGHWQFLSRRENIRKA 361
FE W Q II+ G W V ++QQ ++ CA +LQ W F + R +IRK
Sbjct: 183 FERMWLTHDGVQTIIN--GSWNVQQE--MSIQQRIASCAQSLQHWDKTVFGNVRYSIRKK 242
Query: 362 KAQLKEEY--------GRPLPLVFWKIRQIEDQKAS------------------------ 421
K L+ Y PL I ++ D++ S
Sbjct: 243 KRDLERYYKEAQRNGLSGPLNDCLNDIHELYDREESMWRQRSKVSWLREGDRNSRFFHSI 302
Query: 422 --SRRKRNEIRGVMDEHGIWHENIEEIRHVFEDYFKDIFSTKHPSSKDLDKVLKHIPRRV 481
SR+ + I + D +G W ++ + HV YFKDIF++ P D+++VL + RRV
Sbjct: 303 VNSRKNQTTISSIQDANGEWQTDLASMEHVVCSYFKDIFTSSKPLHSDVEQVLGVVERRV 362
Query: 482 TPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDGFPALFYQKYWEIVGPRTVDNCLAILN 541
T +M+ L E++ EE+ A + K+PG DG P LFYQKYW +VG + + LA LN
Sbjct: 363 TADMNAQLVREFTMEEIRVATFDMGADKSPGPDGMPPLFYQKYWHVVGAKVSEMALAFLN 422
Query: 542 RKQSIKDWNHTNLVLIPK------------------------------------------ 601
S+ D N T++VL+PK
Sbjct: 423 SGVSLPDVNQTDVVLLPKIDHPSSVRDYRPISLCNVIFKIVSKTLANRLREVLPFIIDPN 482
Query: 602 --------------------------KRQA------------------------------ 636
KR
Sbjct: 483 QSAFVPGRMIFDSSIIAFESIHYMKNKRSGGEKHMALKLDLSKAYDRVEWVFLERIMARL 542
BLAST of Lag0005648 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 2.7e-08
Identity = 50/185 (27.03%), Postives = 90/185 (48.65%), Query Frame = 0
Query: 350 SRRENIRKAKAQLKE-EYGRPLPLV-------FWKIRQIEDQKA---SSRRKRNEIRGVM 409
SRR+ I K +A+LKE E + L + F +I +I+ A +R++N+I +
Sbjct: 335 SRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIK 394
Query: 410 DEHGIWHENIEEIRHVFEDYFKDIFSTKHPSSKDLDKVL-KHIPRRVTPEMSRYLNTEYS 469
++ G + EI+ +Y+K +++ K + +++D L + R+ E LN +
Sbjct: 395 NDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPIT 454
Query: 470 REEVERAIKNFHPTKAPGLDGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNL 523
E+ I + K+PG DGF A FYQ+Y E + P + +I + ++
Sbjct: 455 GSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASI 514
BLAST of Lag0005648 vs. ExPASy TrEMBL
Match:
A0A2N9J506 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59303 PE=4 SV=1)
HSP 1 Score: 282.7 bits (722), Expect = 4.6e-72
Identity = 170/525 (32.38%), Postives = 251/525 (47.81%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR + IYG+P + R TW+L+RR+ N PW GDFNEI+ E G R R +Q
Sbjct: 933 WRLSFIYGEPVTHKRMATWNLLRRLHNQHSLPWCCMGDFNEIIKSEEMQGRRPRPDRQMQ 992
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNS------------RLLGN----QVKPIELCLHGET 301
FR+ +DDC L D+ G +TWCN+ R L N Q P+ + H +
Sbjct: 993 AFRDAIDDCNLLDMGYSGFPFTWCNNRDPPHTTWVRLDRGLANMDWLQQNPLAIMEHIDV 1052
Query: 302 YG-------RSW------RWDSKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQN 361
SW + KPF+FEE WT D+ C++ I + V+ + +
Sbjct: 1053 TNSDHKCLFMSWEPHTTSHFQCKPFRFEEVWTSDEGCENTIKESWENRVVGTTMFKVANK 1112
Query: 362 LSVCASALQRWGH-------WQFLSRRENIRKA----------------KAQLKEEYGRP 421
L+ C L W H Q +R +R A K ++ +G+
Sbjct: 1113 LNQCKKGLGNWSHRTFGNISKQLAEKRRLLRSAEIEAVRSGNMSTVKSLKMEVNSLFGKE 1172
Query: 422 LPLVFWKIR------QIEDQ-------KASSRRKRNEIRGVMDEHGIWHENIEEIRHVFE 481
L W+ R + DQ +AS RR+RN I G+ DE G W ++ EE+ +
Sbjct: 1173 ERL--WRQRSRSNWLRAGDQNTRFFHGRASQRRRRNRIVGLRDEDGNWRDSSEEVVAILT 1232
Query: 482 DYFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGL 541
Y++ IF T P +D ++++P +T M+ L+ E+S EV++A+K P APG
Sbjct: 1233 RYYESIFQTSLPD--QIDNAVRYVPNVITQSMNANLDREFSASEVDQALKQMAPLTAPGP 1292
Query: 542 DGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARAGILIASTA 601
DG P LFYQKYW +VGP L+ LN Q + NHT + LIPK + G+ +
Sbjct: 1293 DGLPPLFYQKYWHVVGPDVTKGVLSYLNSGQVLSSINHTYITLIPKVKNPEKGVSLCRMG 1352
Query: 602 PKVSHLFFADDSLIFLKAQASKFGHFKVIMEEYERALGQCTNLVKSMVCFSKNVPEETRA 642
P+++HLFFA+DSL+F +A + I+ YERA GQ N K+ + FSK T+
Sbjct: 1353 PRITHLFFANDSLLFSRATLGDCAKIQEILSTYERASGQQVNRDKTTLFFSKGTSMNTQD 1412
BLAST of Lag0005648 vs. ExPASy TrEMBL
Match:
A0A1R3IKL8 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_11548 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 4.8e-61
Identity = 164/560 (29.29%), Postives = 251/560 (44.82%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WRFTG YG+P++ R+++W L+R + +N PW+ GDFNEIL EK GG +R R ++
Sbjct: 577 WRFTGFYGRPETHRRNESWQLLRTLNSNSSLPWLCTGDFNEILQSDEKVGGVIRPFRQME 636
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSWRWD-------- 301
FR +++C L G TW + ++ G + L R+W WD
Sbjct: 637 GFRSIVEECQFLHLPVVGPFLTW-HKKINGEWIFE---RLDRVLVTRAW-WDRFRHSIEK 696
Query: 302 --------------------------SKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGS 361
+ FKFE+ WT K+ ++ W + +
Sbjct: 697 HLVTTVSDHLPLLISIKEQQGIFTNRQRNFKFEKMWTGHKDFDRVVR--DSW--FSNSTN 756
Query: 362 TLQQNLSVCASALQRWGHWQFLSRRENI---RKAKAQLKEEYGRPLPL------------ 421
+ + C+ L W F + R N+ RK L E P +
Sbjct: 757 AIVDKIWNCSRVLDDWNKRIFGNIRFNLESKRKELVALYREQSDPDRMEECQFEMDGLLH 816
Query: 422 ---VFWKIR-------------QIEDQKASSRRKRNEIRGVMDEHGIWHENIEEIRHVFE 481
V W+ R + A++RRK+N I G+ D + +W ++++ +
Sbjct: 817 QEEVMWRQRSKALWLREGDRNTKYFHSVANARRKKNVILGIEDFNCMWRTEVKDVEEIVC 876
Query: 482 DYFKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGL 541
+Y++D+F++ P+ L+ V+ H+P RV +M L+ ++ EE++ A+ KAPG
Sbjct: 877 NYYQDMFTSTTPTMAALNPVISHVPTRVDADMRCSLDAPFTSEEIKDAVFQLEADKAPGP 936
Query: 542 DGFPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARA-------- 601
DGFP FY K W IVG V L LN ++ D NHTN+VLI K +
Sbjct: 937 DGFPPSFYHKCWHIVGKDVVAFALDFLNNGGNLPDVNHTNIVLIAKNNNPKTMKDYRPIV 996
Query: 602 --------------------------GILIASTAPKVSHLFFADDSLIFLKAQASKFGHF 641
G+ I TAP++SHLFF DDSL+FL A
Sbjct: 997 LCNVIFKIISKAIANRLKADNSNVIHGVAINRTAPRISHLFFTDDSLLFLWACLEDCTAV 1056
BLAST of Lag0005648 vs. ExPASy TrEMBL
Match:
A0A2N9F9E4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11522 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 4.8e-61
Identity = 174/631 (27.58%), Postives = 259/631 (41.05%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR TG+YG P++ R +TW L+R + PW GDFNEI+ E G R R ++
Sbjct: 490 WRLTGVYGAPETHRRDETWTLLRHLSTMFQLPWCCIGDFNEIVKLDEMKGRFPRPDRQMR 549
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSR----------------LLGNQVKPIELCLHGET 301
FR LDDCGL +L +G YTWCN+R + Q P+ + H +
Sbjct: 550 GFRSALDDCGLINLRFRGFPYTWCNNRDPPATTWVRLDRAVATIDWLQRFPMSMVEHIDV 609
Query: 302 YGRS----W---------RWDSKPFKFEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQN 361
W R +PF+FEE W D C+ +I + + +R T+ Q
Sbjct: 610 VKSDHKCIWLDCSLRMIARSKQRPFRFEEVWMADGRCEEVIKQAWEFSQSGTRMYTVWQK 669
Query: 362 LSVCASALQRWGHWQFLS-----------------------RRENIRKAKAQL------K 421
L C+ L W F + R +NI + +L +
Sbjct: 670 LKECSKQLGEWSRTSFGNIKKKIDHLKQKIHQAENNAIQDRRHDNINDLRRELNILLEKE 729
Query: 422 EEYGRPLPLVFWKIRQIEDQ-----KASSRRKRNEIRGVMDEHGIWHENIEEIRHVFEDY 481
E R V W + + KAS RR+RN I + DE G W+++ EEI + +Y
Sbjct: 730 ERMWRQRSRVSWLTQGDRNTKYFHGKASQRRRRNHISRLSDERGRWYDSNEEIAALMIEY 789
Query: 482 FKDIFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDG 541
+ +FST +P+S L++ + +IP+ VT +M+ L ++ EEVE+AIK P+KAPG DG
Sbjct: 790 YNTLFSTSNPTS--LNEAVANIPKVVTVDMNNNLIRDFRVEEVEQAIKQMAPSKAPGPDG 849
Query: 542 FPALFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKR-------------- 601
P +FYQKYW +VG L+ LN + +K NHT + LIPK +
Sbjct: 850 MPPIFYQKYWHVVGHDVTTAVLSCLNSGRVLKSINHTFITLIPKVKCPEKVAFETLHHMH 909
Query: 602 ---------------QARA----------------------------------------- 636
++A
Sbjct: 910 TNKLGREGAMALKLDMSKAYDRVEWSYLEAVMEKMGFHQKWIALMLECISSVSYSVLING 969
BLAST of Lag0005648 vs. ExPASy TrEMBL
Match:
A0A2N9HLP3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1)
HSP 1 Score: 238.0 bits (606), Expect = 1.3e-58
Identity = 165/608 (27.14%), Postives = 246/608 (40.46%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WRFTG YG P++S R ++W L+RR+ + PW GDFNE++ EK G R R +Q
Sbjct: 471 WRFTGFYGAPETSKREESWALLRRLNSQSTLPWCCMGDFNELVRIKEKQGRHSRSERQMQ 530
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRL-------LGNQVKPIELCLH---GETYGRSWR 301
FR+ LDDCG DL G +TW N+RL L V E L Y R
Sbjct: 531 LFRDVLDDCGFVDLGFNGPKFTWTNNRLGDMTWERLDRAVATPEWLLRFPSARVYHLDVR 590
Query: 302 WDS----------------KPFKFEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQNLSV 361
W KPF+FEE WT D+ C+ ++ V ++ + +
Sbjct: 591 WSDHKPLWVSTNPMKCQIRKPFRFEEVWTSDQGCEETVANAWKQSVNGVPMFSVWEKIHK 650
Query: 362 CASALQRWGHWQFLSRRENIRKAKAQLKEEYG---------------RPLPLVFWKIRQI 421
C L+ W F + + I++ + +LK+ R L + K ++
Sbjct: 651 CRRDLRSWSKHNFGNIKAKIKEVEHRLKQAEAVSMQGYQHHHVWYLRRELHSLLAKEERL 710
Query: 422 EDQ-------------------KASSRRKRNEIRGVMDEHGIWHENIEEIRHVFEDYFKD 481
Q +A+ R++RN + + + G W N ++ +F D++
Sbjct: 711 WRQRSRAEWLKAGDRNTRYFHCRATQRQRRNYVYQLKNSEGRWTTNHAQVPALFLDHYNS 770
Query: 482 IFSTKHPSSKDLDKVLKHIPRRVTPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDGFPA 541
+F T P +D+V +HI VT EM+ LN ++ EV A+K P KAPG DG P
Sbjct: 771 LFQTGFPD--QIDQVAEHIMPVVTEEMNADLNRTFTPGEVVAALKQMAPLKAPGPDGLPP 830
Query: 542 LFYQKYWEIVGPRTVDNCLAILNRKQSIKDWNHTNLVLIPKKRQARA------------- 601
LF+QKYW +G + L LN + +K NHT + LIPK + A
Sbjct: 831 LFFQKYWHFIGDEVTEVVLTCLNTGKILKAINHTYITLIPKVQNPEAVVDFRPIGLCNVI 890
Query: 602 ------------------------------------------------------------ 636
Sbjct: 891 YKIISKVLANRLKILLPKIISESQSAFVPGRLITDNILVAFETLHHMQHQKKGRIGSMAL 950
BLAST of Lag0005648 vs. ExPASy TrEMBL
Match:
A0A1R3JNE6 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_04975 PE=4 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 8.5e-58
Identity = 178/656 (27.13%), Postives = 265/656 (40.40%), Query Frame = 0
Query: 182 WRFTGIYGQPDSSLRSQTWDLIRRIQNNDDSPWVIGGDFNEILWDHEKAGGPMRDRRLIQ 241
WR TG YG+P++S R ++WDL+R++ PW+ GDFNEIL + EK GGP R +R ++
Sbjct: 63 WRLTGFYGRPETSRRHESWDLLRQLSEQSTLPWMCVGDFNEILTNDEKIGGPPRSQRQME 122
Query: 242 NFRETLDDCGLRDLECQGVIYTWCNSRLLGNQVKPIELCLHGETYGRSW---RWDSKPFK 301
FR T++ C RDL +G + TW SRL+ ++ L LH E + W ++ + F+
Sbjct: 123 MFRATVEFCEFRDLPIKGPLMTW--SRLMSSESD--HLPLHIEILDKPWVGIHYNHR-FR 182
Query: 302 FEEFWTRDKECQHIISKVGLWEVMDSRGSTLQQNLSVCASALQRWGHWQFLSRRENIRKA 361
FE W Q II+ G W V ++QQ ++ CA +LQ W F + R +IRK
Sbjct: 183 FERMWLTHDGVQTIIN--GSWNVQQE--MSIQQRIASCAQSLQHWDKTVFGNVRYSIRKK 242
Query: 362 KAQLKEEY--------GRPLPLVFWKIRQIEDQKAS------------------------ 421
K L+ Y PL I ++ D++ S
Sbjct: 243 KRDLERYYKEAQRNGLSGPLNDCLNDIHELYDREESMWRQRSKVSWLREGDRNSRFFHSI 302
Query: 422 --SRRKRNEIRGVMDEHGIWHENIEEIRHVFEDYFKDIFSTKHPSSKDLDKVLKHIPRRV 481
SR+ + I + D +G W ++ + HV YFKDIF++ P D+++VL + RRV
Sbjct: 303 VNSRKNQTTISSIQDANGEWQTDLASMEHVVCSYFKDIFTSSKPLHSDVEQVLGVVERRV 362
Query: 482 TPEMSRYLNTEYSREEVERAIKNFHPTKAPGLDGFPALFYQKYWEIVGPRTVDNCLAILN 541
T +M+ L E++ EE+ A + K+PG DG P LFYQKYW +VG + + LA LN
Sbjct: 363 TADMNAQLVREFTMEEIRVATFDMGADKSPGPDGMPPLFYQKYWHVVGAKVSEMALAFLN 422
Query: 542 RKQSIKDWNHTNLVLIPK------------------------------------------ 601
S+ D N T++VL+PK
Sbjct: 423 SGVSLPDVNQTDVVLLPKIDHPSSVRDYRPISLCNVIFKIVSKTLANRLREVLPFIIDPN 482
Query: 602 --------------------------KRQA------------------------------ 636
KR
Sbjct: 483 QSAFVPGRMIFDSSIIAFESIHYMKNKRSGGEKHMALKLDLSKAYDRVEWVFLERIMARL 542
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O00370 | 2.7e-08 | 27.03 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9J506 | 4.6e-72 | 32.38 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59303 PE=4 SV=1 | [more] |
A0A1R3IKL8 | 4.8e-61 | 29.29 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_11548 PE=4 SV... | [more] |
A0A2N9F9E4 | 4.8e-61 | 27.58 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9HLP3 | 1.3e-58 | 27.14 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1 | [more] |
A0A1R3JNE6 | 8.5e-58 | 27.13 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_04975 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |