Lag0004969 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTGTGGAGTGGGAAGCATAAAGAACCTCGAACATCTAATGGATCTGCTCTAAATGCTTCACTAGATACAGCCATTCGGGAACCGGATACTCTGAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGGAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCTGGGTCTGAATCTGATGATTCAGATTGGTCGATTGGATGGTCGGAACCCCATGGACCTGGATTCCAGAGCGATGATGACACAGACAACAGTTTTGCTGTGCTGGTTCCTTGTTATGGACGCATTTATAATGATTTTGTGGACGAAACTAAGAACAGTATCCTTAGTGCTGTTGGAAACATCAACGATAGCTTTTCTGCCGGTAAGATTTGTTTCTTCTCAAGCTTGCATTTTGATTGGTGTTGCTTGTTTGTTTTTATTGCTTCGCCTTCCGAAATATTCTTCTAG ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTGTGGAGTGGGAAGCATAAAGAACCTCGAACATCTAATGGATCTGCTCTAAATGCTTCACTAGATACAGCCATTCGGGAACCGGATACTCTGAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGGAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCTGGGTCTGAATCTGATGATTCAGATTGGTCGATTGGATGGTCGGAACCCCATGGACCTGGATTCCAGAGCGATGATGACACAGACAACAGTTTTGCTGTGCTGGTTCCTTGTTATGGACGCATTTATAATGATTTTGTGGACGAAACTAAGAACAGTATCCTTAGTGCTGTTGGAAACATCAACGATAGCTTTTCTGCCGGTAAGATTTGTTTCTTCTCAAGCTTGCATTTTGATTGGTGTTGCTTGTTTGTTTTTATTGCTTCGCCTTCCGAAATATTCTTCTAG ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTGTGGAGTGGGAAGCATAAAGAACCTCGAACATCTAATGGATCTGCTCTAAATGCTTCACTAGATACAGCCATTCGGGAACCGGATACTCTGAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGGAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCTGGGTCTGAATCTGATGATTCAGATTGGTCGATTGGATGGTCGGAACCCCATGGACCTGGATTCCAGAGCGATGATGACACAGACAACAGTTTTGCTGTGCTGGTTCCTTGTTATGGACGCATTTATAATGATTTTGTGGACGAAACTAAGAACAGTATCCTTAGTGCTGTTGGAAACATCAACGATAGCTTTTCTGCCGGTAAGATTTGTTTCTTCTCAAGCTTGCATTTTGATTGGTGTTGCTTGTTTGTTTTTATTGCTTCGCCTTCCGAAATATTCTTCTAG MSVAFPQLSWWLWSGKHKEPRTSNGSALNASLDTAIREPDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDTDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKICFFSSLHFDWCCLFVFIASPSEIFF Homology
BLAST of Lag0004969 vs. NCBI nr
Match: KAA0065096.1 (Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa]) HSP 1 Score: 324.7 bits (831), Expect = 5.1e-85 Identity = 157/165 (95.15%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of Lag0004969 vs. NCBI nr
Match: KAG7020253.1 (hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 151/160 (94.38%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of Lag0004969 vs. NCBI nr
Match: XP_023001877.1 (uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001879.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001880.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023536720.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536721.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536722.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80 Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of Lag0004969 vs. NCBI nr
Match: XP_022951746.1 (uncharacterized protein LOC111454487 [Cucurbita moschata] >XP_022951747.1 uncharacterized protein LOC111454487 [Cucurbita moschata]) HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80 Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of Lag0004969 vs. NCBI nr
Match: KAG6585342.1 (hypothetical protein SDJN03_18075, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79 Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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