Lag0004843 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004843
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr6: 7649907 .. 7651681 (-)
RNA-Seq ExpressionLag0004843
SyntenyLag0004843
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGATCGGGTCTGGAAGCAAGTCCAAGGGTGGAAGGGCAAATTTTTCTCAACGGGTGGCAAGGAAGTGTTGCTTAAATCTATCGTGCAAGCCATTCCATGCTACACAATGAACTGTTTCAGATTGCTGAAATGTTTGATTGGTGAAATCCATCGTCTCATGGCGAACTTTTGGTGGGATAATCCTGAAGGGGGGAAAGAAGATTCATTGGTTGAGCTGGAAATCCCTTTGTCTCCCAAAGTGTCGAGGTGGGTTGGGGTTTAGAGATATGGAATTGTTTAATCAGTCCCTTCTGGCAAAACAATGCTGGCGGGTGCTCCATGACCCTTCCTCTCTCCTTAGCTTGGTGCTGAAGGGTCGGTACTTTCTAGGTACGAGTTTCGTTGGGGCCAGTTTGGGGCATCGACCGTCATATGTTTGGAGAAGCTTATTATGGGGGCGTGATCTTCTGATGAGAGGGTGTCAGTGGCGTATAGGTAATGGCTCTTTGGTCCCTATTTACTTCTCGAATTGGCTCCCGAATGAGTTTTCATTGCAAGTTCACTCTTTCCCCTCCTTGCCTTTGACCAGTTGTGTTCGTGATTTGTTTACTGGTTCAGGACATTGGGATGAGGTGAAAGTCCGATCCCATTTTACCATGGCAGACAGTGAAGCTATCTTGAGAATACCGCTTGGGCATCTTTCTCTGGAAGATAAGTTGATATGGCATTTTGAGAAGAATGGCCTTTACTCTGTTAAGGGTGGATACCGGTTGGCTCATAGATTGAGTGTGCAAGATCAACCATCCTCGTCAGACTCGGCTTTATGGCATGAGTGGTGGTCTAGTCTCTGGAAGATGAATGTTCCAAGCAAAGTTAAATTCTTCTTTTGGAGGTTATGTCACAACCGGCTACCCACAAAGGACAATCTTCTTAAAAGAGGTATGGATGTTTCTAATATGTGTGTGATATGTCAATCTTCTCCGGAGAGTTGTTTTCATATTTATTGGGATTGTCCTATGATTAAATCCATGTGGTGTTGCTCTGAGTTTGTATCGTTATACCAATCTTTTTCTGAATTGAATTTTGAATCGTTGTTGTGGGCTTTAAAGGAGAAAGTGAGCAGGCTGGATTTTGAGTTTTTTGTTGTTTTCTGGTGGACTATATGGAACTCTCGTAATTCTCTGTTATGGGAGGGAAGGTGTGATGACCGTGATCTGTTTCAGTGGGCGAGAAATTACCTTGAGACGTTCCAGCAGGCGTCGATAAGGAATGGGTTGTCGCCGGCGTCGGGGGTGGTGCGGTAGTGGCGTGGGTTCCTCCAGCCGAGAATGAACTGAAGTTGAATGTTGACGCAGCAGTTAGGCCCGAGACGAGAGAGGCTAGTGGTGGCTTTGTCTTGCGCAATGGTAGGGGGAAGTGTTGTTGACAGCGTGTGAACTTCTGCCTTCGTGTTGGAACGTTGATTTGGCAGAGGGCTGGGCAATGTTGAGGGGTATACAAGTTGCTCGTCAGATGGGTTTTTTCTGTTTTCATGTTGAGACCGATTCGTTGAGATTATCTAAAGTTCTGACTGATGATGTGGACGATATTTCGGAAGTAGGTGCAATTATGGATGTGATTCGAGGATTGCTTCGACAAGATTCTTCATGTAGGGTGTTGTTCACACCCAGGCAAGGCAACATGGTAGCACATACCATGGCTTCTTTAGCTTTTGTTTATGCTAATTTTGTTTGGCTTGAGGATTGGCCCTCTGAGGCCTCAGATGTACTTTCTCGTGACTTTTCCTCCTAA

mRNA sequence

ATGAGAGATCGGGTCTGGAAGCAAGTCCAAGGGTGGAAGGGCAAATTTTTCTCAACGGGTGGCAAGGAAGTGTTGCTTAAATCTATCGTGCAAGCCATTCCATGCTACACAATGAACTGTTTCAGATTGCTGAAATGTTTGATTGGTGAAATCCATCGTCTCATGGCGAACTTTTGGTGGGATAATCCTGAAGGGGGGAAAGAAGATTCATTGGTTGAGCTGGAAATCCCTTTGTCTCCCAAAGTGTCGAGCTTGGTGCTGAAGGGTCGGTACTTTCTAGGTACGAGTTTCGTTGGGGCCAGTTTGGGGCATCGACCGTCATATGTTTGGAGAAGCTTATTATGGGGGCGTGATCTTCTGATGAGAGGGTGTCAGTGGCGTATAGGTAATGGCTCTTTGGTCCCTATTTACTTCTCGAATTGGCTCCCGAATGAGTTTTCATTGCAAGTTCACTCTTTCCCCTCCTTGCCTTTGACCAGTTGTGTTCGTGATTTGTTTACTGGTTCAGGACATTGGGATGAGGTGAAAGTCCGATCCCATTTTACCATGGCAGACAGTGAAGCTATCTTGAGAATACCGCTTGGGCATCTTTCTCTGGAAGATAAGTTGATATGGCATTTTGAGAAGAATGGCCTTTACTCTGTTAAGGGTGGATACCGGTTGGCTCATAGATTGAGTGTGCAAGATCAACCATCCTCGTCAGACTCGGCTTTATGGCATGAGTGGTGGTCTAGTCTCTGGAAGATGAATGTTCCAAGCAAAGTTAAATTCTTCTTTTGGAGGTTATGTCACAACCGGCTACCCACAAAGGACAATCTTCTTAAAAGAGCAGGCGTCGATAAGGAATGGGTTGTCGCCGGCGTCGGGGGTGGTGCGGTAGTGGCGTGGGTTCCTCCAGCCGAGAATGAACTGAAGTTGAATGTTGACGCAGCAGTTAGGCCCGAGACGAGAGAGGCTAGTGGTGGCTTTGTCTTGCGCAATGAGGGCTGGGCAATGTTGAGGGGTATACAAGTTGCTCGTCAGATGGGTTTTTTCTGTTTTCATGTTGAGACCGATTCGTTGAGATTATCTAAAGTTCTGACTGATGATGTGGACGATATTTCGGAAGTAGGTGCAATTATGGATGTGATTCGAGGATTGCTTCGACAAGATTCTTCATGTAGGGTGTTGTTCACACCCAGGCAAGGCAACATGGTAGCACATACCATGGCTTCTTTAGCTTTTGTTTATGCTAATTTTGTTTGGCTTGAGGATTGGCCCTCTGAGGCCTCAGATGTACTTTCTCGTGACTTTTCCTCCTAA

Coding sequence (CDS)

ATGAGAGATCGGGTCTGGAAGCAAGTCCAAGGGTGGAAGGGCAAATTTTTCTCAACGGGTGGCAAGGAAGTGTTGCTTAAATCTATCGTGCAAGCCATTCCATGCTACACAATGAACTGTTTCAGATTGCTGAAATGTTTGATTGGTGAAATCCATCGTCTCATGGCGAACTTTTGGTGGGATAATCCTGAAGGGGGGAAAGAAGATTCATTGGTTGAGCTGGAAATCCCTTTGTCTCCCAAAGTGTCGAGCTTGGTGCTGAAGGGTCGGTACTTTCTAGGTACGAGTTTCGTTGGGGCCAGTTTGGGGCATCGACCGTCATATGTTTGGAGAAGCTTATTATGGGGGCGTGATCTTCTGATGAGAGGGTGTCAGTGGCGTATAGGTAATGGCTCTTTGGTCCCTATTTACTTCTCGAATTGGCTCCCGAATGAGTTTTCATTGCAAGTTCACTCTTTCCCCTCCTTGCCTTTGACCAGTTGTGTTCGTGATTTGTTTACTGGTTCAGGACATTGGGATGAGGTGAAAGTCCGATCCCATTTTACCATGGCAGACAGTGAAGCTATCTTGAGAATACCGCTTGGGCATCTTTCTCTGGAAGATAAGTTGATATGGCATTTTGAGAAGAATGGCCTTTACTCTGTTAAGGGTGGATACCGGTTGGCTCATAGATTGAGTGTGCAAGATCAACCATCCTCGTCAGACTCGGCTTTATGGCATGAGTGGTGGTCTAGTCTCTGGAAGATGAATGTTCCAAGCAAAGTTAAATTCTTCTTTTGGAGGTTATGTCACAACCGGCTACCCACAAAGGACAATCTTCTTAAAAGAGCAGGCGTCGATAAGGAATGGGTTGTCGCCGGCGTCGGGGGTGGTGCGGTAGTGGCGTGGGTTCCTCCAGCCGAGAATGAACTGAAGTTGAATGTTGACGCAGCAGTTAGGCCCGAGACGAGAGAGGCTAGTGGTGGCTTTGTCTTGCGCAATGAGGGCTGGGCAATGTTGAGGGGTATACAAGTTGCTCGTCAGATGGGTTTTTTCTGTTTTCATGTTGAGACCGATTCGTTGAGATTATCTAAAGTTCTGACTGATGATGTGGACGATATTTCGGAAGTAGGTGCAATTATGGATGTGATTCGAGGATTGCTTCGACAAGATTCTTCATGTAGGGTGTTGTTCACACCCAGGCAAGGCAACATGGTAGCACATACCATGGCTTCTTTAGCTTTTGTTTATGCTAATTTTGTTTGGCTTGAGGATTGGCCCTCTGAGGCCTCAGATGTACTTTCTCGTGACTTTTCCTCCTAA

Protein sequence

MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKRAGVDKEWVVAGVGGGAVVAWVPPAENELKLNVDAAVRPETREASGGFVLRNEGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFVYANFVWLEDWPSEASDVLSRDFSS
Homology
BLAST of Lag0004843 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 5.3e-72
Identity = 144/310 (46.45%), Postives = 186/310 (60.00%), Query Frame = 0

Query: 1   MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
           ++DRVWK +QGWK K FS GGKEVL+K++ QAIPCYTM+CFRL K LI E H + A FWW
Sbjct: 561 IKDRVWKHLQGWKAKLFSIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWW 620

Query: 61  DNPEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKG 120
            + +  K+   V       PK                               + S VLKG
Sbjct: 621 GSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKG 680

Query: 121 RYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQ 180
           RYF   SF+ A +   PSY+WRS+LWGRDLL +G +WRIGNG  V IY  NW+PN+ +L+
Sbjct: 681 RYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLK 740

Query: 181 VHSFPSLPLTSCVRDLFT-GSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFE 240
           + S P LPL S V  L     G W    VR  FT  +++ IL IP+G  + ED+LIW++E
Sbjct: 741 ILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYE 800

Query: 241 KNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR 277
           K G+YSV+ GY++A  +   VQ  PSSS S     WW+  WKM++P+K+K F WRLC +R
Sbjct: 801 KTGVYSVRSGYKVALLNNPCVQ-APSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDR 860

BLAST of Lag0004843 vs. NCBI nr
Match: CAB4263564.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 269.2 bits (687), Expect = 6.0e-68
Identity = 177/530 (33.40%), Postives = 248/530 (46.79%), Query Frame = 0

Query: 1    MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
            ++DRVW +V GW+GK  S  GKEVL+KS+ QAIP Y+M+ FRL   L  EI  ++A FWW
Sbjct: 730  VKDRVWNKVNGWQGKLLSKAGKEVLIKSVCQAIPSYSMSVFRLPVGLCREIESIIAKFWW 789

Query: 61   DNPEG-------------GKEDSLVE-------------------LEIPLSPKVSSLVLK 120
               +G              K D  +                    LE P S  + + + K
Sbjct: 790  SKNDGRGIHWKTWRFMCQHKSDGGIGFRELTSFNQALLCKQGWRLLEFPNS--LIARMFK 849

Query: 121  GRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL 180
             RYF  + F+ AS G  PS+ W+SLLWGRDLL  G +WRIG+G LV IY   W+P +   
Sbjct: 850  ARYFPHSDFLAASSGSLPSFTWQSLLWGRDLLRLGLRWRIGDGRLVNIYGDPWVPYDRFF 909

Query: 181  QVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFE 240
             + S P+LP+TS V DLFT SG WD  KV + F+  ++EAIL IPL   +L D+ IW+F 
Sbjct: 910  TIQSIPTLPVTSRVCDLFTASGGWDVRKVFASFSFPEAEAILSIPLMGDTL-DRRIWNFT 969

Query: 241  KNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL 300
            KNG YSVK GY  A        LS       S S+L  + W  LWK+ VP K+    WR+
Sbjct: 970  KNGRYSVKSGYWAALEYKRLEELSTGGVAGPSSSSL--KSWKHLWKLKVPQKILHLLWRV 1029

Query: 301  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA- 360
              + LP+K+ L +R                            +D  W +      ++ A 
Sbjct: 1030 AQDILPSKEVLFRRRITQGEVWEALDFPSNFLLPTLADVGTWMDAIWSIIPPDKQSLFAF 1089

Query: 361  ------------WVPPAENELKLNVDAAVRPETREASGGFVLRN---------------- 420
                        W PP  N  KLNVD A   ET     G ++R+                
Sbjct: 1090 TVSLSSPVCDIKWRPPTGNCFKLNVDGATDMETGARGAGAIVRDSHGKLVGALAMRAPSR 1149

Query: 421  ------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLL 431
                  E +A+  GI  A  M      +E+DSL+   ++  + + ++  G ++D +R LL
Sbjct: 1150 ISVLATELYALKVGISFALDMSPVPLEIESDSLQAVSMVNSEEECLAAEGGLVDGVRRLL 1209

BLAST of Lag0004843 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 245.7 bits (626), Expect = 7.1e-61
Identity = 165/580 (28.45%), Postives = 246/580 (42.41%), Query Frame = 0

Query: 4    RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNP 63
            RV  ++  W+ KFF++GGKEVL+K++ QAIP Y M+ F++   L  +I + MA FWW   
Sbjct: 570  RVLNKISSWQHKFFTSGGKEVLIKAVAQAIPTYAMSVFKIPLGLCEDIQKAMARFWWGTK 629

Query: 64   EGGK---------------------------EDSLVELE----IPLSPKVSSLVLKGRYF 123
            +  K                             +LV  +    +     + + VLK RYF
Sbjct: 630  QDRKGIHWARWERISHSKARGGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYF 689

Query: 124  LGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHS 183
              T F+ A LG +PS+VWRS++WGR +L +G +WRIGNG  V +Y +NW+P   + +  S
Sbjct: 690  KHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPIS 749

Query: 184  FPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGL 243
             PS+   + V +L      W E  +  HF   D+EAI++IPL     ED+LIWH++K G 
Sbjct: 750  APSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGY 809

Query: 244  YSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDN 303
            YSVK GY++A R+   + PS S+       W  +WK+ +P KVK F WR  H+ LPT +N
Sbjct: 810  YSVKSGYQVAMRIKFPEDPSCSNHD--QNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAEN 869

Query: 304  LLKR-----------------------------------------AGV---DKEWVV--- 363
            L K+                                          GV   D  W++   
Sbjct: 870  LWKKKVLQEPMCQSCHCHVETVSHALVECNRARKIWRYSNLAEELRGVYRCDIVWMLQFW 929

Query: 364  ----AGVGGGAVVA---------------------------------------------- 423
                A V G  V A                                              
Sbjct: 930  PRQHAKVEGAEVAALLWAIWKARNKWLFEGKKENPLRVVANAEAIVESFKKIRQPEMVYK 989

BLAST of Lag0004843 vs. NCBI nr
Match: XP_030487384.1 (uncharacterized protein LOC115704310 [Cannabis sativa])

HSP 1 Score: 243.0 bits (619), Expect = 4.6e-60
Identity = 113/276 (40.94%), Postives = 166/276 (60.14%), Query Frame = 0

Query: 1   MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
           +++RVW +++GWKG FFS   KEVL+K+IVQAIP YTM+CFRL K  I  IH + A FWW
Sbjct: 463 IKNRVWNKLKGWKGSFFSAARKEVLIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARFWW 522

Query: 61  DNPEGGKEDSLVELEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLL 120
            + E   +D+ +             VLK  Y+  +  + A  G+  S+VWRSL+WG+ ++
Sbjct: 523 GSSE---KDAKIHW-------CKCKVLKASYYPYSGVLEAKCGNHASFVWRSLVWGKKII 582

Query: 121 MRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSH 180
            +G +WRIGN + V +   +WLP   + +++  P LP    V DL    G WD+  VR+ 
Sbjct: 583 QKGHRWRIGNRNSVRVLEDSWLPRPITFKIYDKPPLPDQLYVIDLKEPHGAWDKEFVRAV 642

Query: 181 FTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWH 240
           F   D++ IL +P     +EDK++WH+ K+G YSV+ GYR+A  L V+D    SD+    
Sbjct: 643 FNPTDADLILSMPTSEWDIEDKILWHYSKDGEYSVRSGYRMAAALKVRD--VQSDTEATE 702

Query: 241 EWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR 277
           +WW  LWK+ +P KVK F W++ H+ +PT   L  R
Sbjct: 703 KWWKLLWKLKIPPKVKHFVWKMAHSWIPTNAVLAHR 726

BLAST of Lag0004843 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 242.7 bits (618), Expect = 6.0e-60
Identity = 163/587 (27.77%), Postives = 252/587 (42.93%), Query Frame = 0

Query: 4    RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNP 63
            +V  ++ GW+ KF S+GGKEVL+K+  QAIP Y M+ F+L +    +I R +A FWW + 
Sbjct: 806  KVLNKIAGWQQKFLSSGGKEVLIKAAAQAIPAYAMSVFKLPRGFCDDIQRAIAKFWWGSK 865

Query: 64   -------------------EGGK--------EDSLVE------LEIPLSPKVSSLVLKGR 123
                                GG           +LV       L+ P S  + S VL+ R
Sbjct: 866  GDKRGIHWRKWEKLSQAKIRGGLGFREFSCFNQALVAKQAWRLLQYPNS--LVSRVLQAR 925

Query: 124  YFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQV 183
            YF  +SF+ A  G   SY+WRS++WGR ++ +G +WRIGNG  + I+  NWLP   + + 
Sbjct: 926  YFRNSSFLCAKAGANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRP 985

Query: 184  HSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKN 243
                SLP++S V DL      WDE+K+R HF   D+  IL+IPL     ED+++WH++K 
Sbjct: 986  IFPLSLPVSSVVADLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKR 1045

Query: 244  GLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTK 303
            G YSVK GY+LA R    D  S ++++  H++WS+LW + +P K+K F WR  +N LP+ 
Sbjct: 1046 GNYSVKSGYQLALRSKFPDSTSCTEAS--HKYWSALWTLELPEKLKIFMWRASNNLLPSA 1105

Query: 304  DNLLKRAGVD-------------------------KEW---------------------- 363
            +NL KR  V+                         K W                      
Sbjct: 1106 ENLWKRKVVEEPTCKRCKLSVETISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQ 1165

Query: 364  -------------------------------------VVAGVGGGAVVA----------- 423
                                                 +++     +V+            
Sbjct: 1166 NMAKELRKSDLELMVALCWSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQS 1225

Query: 424  ------------WVPPAENELKLNVDAAVRPETREASGGFVLRN---------------- 428
                        W+PP +N  K+NVDAA   +   A  G V+R+                
Sbjct: 1226 HISISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLK 1285

BLAST of Lag0004843 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-19
Identity = 73/312 (23.40%), Postives = 142/312 (45.51%), Query Frame = 0

Query: 3   DRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDN 62
           +RV  ++ GW+ K  S  G+  L K+++ ++P ++M+   L + ++  + +L   F W +
Sbjct: 18  ERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGS 77

Query: 63  PEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKGRY 122
               K+  LV+     SPK                               + +LVL+ +Y
Sbjct: 78  TAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKY 137

Query: 123 FLGTSFVGASLGHRPSY--VWRSLLWG-RDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL 182
            +G       L  + S+   WRS+  G RD++  G  W  G+G  +  +   W+  +  L
Sbjct: 138 HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLL 197

Query: 183 QVHS--FPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHL--SLEDKLI 242
           ++ +   P+   T   +DL+     WD  K+   +T  ++   LR  +  L     D+L 
Sbjct: 198 ELDNGERPTDCDTVVAKDLWIPGRGWDFAKI-DPYTTNNTRLELRAVVLDLVTGARDRLS 257

Query: 243 WHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCH 277
           W F ++G +SV+  Y +   L+V + P  + ++    +++ LWK+ VP +VK F W + +
Sbjct: 258 WKFSQDGQFSVRSAYEM---LTVDEVPRPNMAS----FFNCLWKVRVPERVKTFLWLVGN 317

BLAST of Lag0004843 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 0

Query: 32  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK---------- 91
           A+P Y M+CFRL K L  ++   M  FWW + E  ++ S V  +     K          
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 92  ----------------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDL 149
                                 + S +L+ RYF  +S +  S+G RPSY WRS++ GR+L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

BLAST of Lag0004843 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.5e-72
Identity = 144/310 (46.45%), Postives = 186/310 (60.00%), Query Frame = 0

Query: 1   MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
           ++DRVWK +QGWK K FS GGKEVL+K++ QAIPCYTM+CFRL K LI E H + A FWW
Sbjct: 561 IKDRVWKHLQGWKAKLFSIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWW 620

Query: 61  DNPEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKG 120
            + +  K+   V       PK                               + S VLKG
Sbjct: 621 GSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKG 680

Query: 121 RYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQ 180
           RYF   SF+ A +   PSY+WRS+LWGRDLL +G +WRIGNG  V IY  NW+PN+ +L+
Sbjct: 681 RYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLK 740

Query: 181 VHSFPSLPLTSCVRDLFT-GSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFE 240
           + S P LPL S V  L     G W    VR  FT  +++ IL IP+G  + ED+LIW++E
Sbjct: 741 ILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYE 800

Query: 241 KNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR 277
           K G+YSV+ GY++A  +   VQ  PSSS S     WW+  WKM++P+K+K F WRLC +R
Sbjct: 801 KTGVYSVRSGYKVALLNNPCVQ-APSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDR 860

BLAST of Lag0004843 vs. ExPASy TrEMBL
Match: A0A803Q0L5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.5e-69
Identity = 169/562 (30.07%), Postives = 250/562 (44.48%), Query Frame = 0

Query: 1   MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
           ++++VW +++GWK   FS  GKEVL+K++VQAIP Y M+CFRL K  I  IHR+ A FWW
Sbjct: 349 IKNKVWAKMKGWKSSMFSMAGKEVLIKAVVQAIPTYAMSCFRLSKKTISSIHRMAARFWW 408

Query: 61  DNPEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKG 120
            + E  K+    +      PK                               + S VLK 
Sbjct: 409 GSSEKDKKIHWCKWAHLCKPKDKGGLGFRDLGFFNQAILAKQVWRCIRCLNNLCSRVLKA 468

Query: 121 RYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQ 180
            YF   + + A  G   S+VWRSL+WG+ +++ G +WR+GNG  V +    WLP   + +
Sbjct: 469 SYFPHKTILEAKSGACASFVWRSLIWGKKVIVNGYRWRVGNGENVRVLEDPWLPRPVTFK 528

Query: 181 VHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEK 240
           ++  P LP    V D+  G G WD + ++  F   D+E IL +P     LEDK++WH+ K
Sbjct: 529 IYDKPPLPANMVVADMKHGDGSWDSIFIQEVFNSDDAELILSMPSTGWELEDKIMWHYSK 588

Query: 241 NGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT 300
           NG Y+VK GY++A  L V++Q  S+D  L  +WW +LW+  +P K+K F W+L +N LPT
Sbjct: 589 NGEYTVKSGYKMASSL-VEEQYQSNDKVL-VDWWKALWRFKIPPKIKHFVWKLAYNWLPT 648

Query: 301 KDNLLKRAGVDKEWVVAGV----------------------------------------- 360
              L KR G  + W V+G                                          
Sbjct: 649 NVTLAKRGGSKEFWAVSGFKDEMKRLKDEDVLSFLMRMARQWDKGKFEFFLVLTWNIWNI 708

Query: 361 ----------------------------GGGAVVA---------WVPPAENELKLNVDAA 420
                                       GGGA            W  P    +K+NVDA 
Sbjct: 709 RNSVIHGGIAPMAGEMVDWCRKYLTEFEGGGATAVSRVRRENSKWGAPELGRMKINVDAR 768

Query: 421 VRPETREASGGFVLRNEG----------------------WAMLRGIQVARQMGFFCFHV 431
           V+     +  G V+R+ G                       A+L G+QV        F +
Sbjct: 769 VKSGGGVSGIGCVIRDSGGRTLYASSAVVHQELAPLQLELQAILVGLQVGIHRKIHRFSI 828

BLAST of Lag0004843 vs. ExPASy TrEMBL
Match: A0A6J5TIF9 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4077 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.9e-68
Identity = 177/530 (33.40%), Postives = 248/530 (46.79%), Query Frame = 0

Query: 1    MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
            ++DRVW +V GW+GK  S  GKEVL+KS+ QAIP Y+M+ FRL   L  EI  ++A FWW
Sbjct: 730  VKDRVWNKVNGWQGKLLSKAGKEVLIKSVCQAIPSYSMSVFRLPVGLCREIESIIAKFWW 789

Query: 61   DNPEG-------------GKEDSLVE-------------------LEIPLSPKVSSLVLK 120
               +G              K D  +                    LE P S  + + + K
Sbjct: 790  SKNDGRGIHWKTWRFMCQHKSDGGIGFRELTSFNQALLCKQGWRLLEFPNS--LIARMFK 849

Query: 121  GRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL 180
             RYF  + F+ AS G  PS+ W+SLLWGRDLL  G +WRIG+G LV IY   W+P +   
Sbjct: 850  ARYFPHSDFLAASSGSLPSFTWQSLLWGRDLLRLGLRWRIGDGRLVNIYGDPWVPYDRFF 909

Query: 181  QVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFE 240
             + S P+LP+TS V DLFT SG WD  KV + F+  ++EAIL IPL   +L D+ IW+F 
Sbjct: 910  TIQSIPTLPVTSRVCDLFTASGGWDVRKVFASFSFPEAEAILSIPLMGDTL-DRRIWNFT 969

Query: 241  KNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL 300
            KNG YSVK GY  A        LS       S S+L  + W  LWK+ VP K+    WR+
Sbjct: 970  KNGRYSVKSGYWAALEYKRLEELSTGGVAGPSSSSL--KSWKHLWKLKVPQKILHLLWRV 1029

Query: 301  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA- 360
              + LP+K+ L +R                            +D  W +      ++ A 
Sbjct: 1030 AQDILPSKEVLFRRRITQGEVWEALDFPSNFLLPTLADVGTWMDAIWSIIPPDKQSLFAF 1089

Query: 361  ------------WVPPAENELKLNVDAAVRPETREASGGFVLRN---------------- 420
                        W PP  N  KLNVD A   ET     G ++R+                
Sbjct: 1090 TVSLSSPVCDIKWRPPTGNCFKLNVDGATDMETGARGAGAIVRDSHGKLVGALAMRAPSR 1149

Query: 421  ------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLL 431
                  E +A+  GI  A  M      +E+DSL+   ++  + + ++  G ++D +R LL
Sbjct: 1150 ISVLATELYALKVGISFALDMSPVPLEIESDSLQAVSMVNSEEECLAAEGGLVDGVRRLL 1209

BLAST of Lag0004843 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-66
Identity = 168/574 (29.27%), Postives = 250/574 (43.55%), Query Frame = 0

Query: 1   MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
           ++++VW +++GWK   FS  GKEVL+K IVQAIP YTM+CF+L K  I  +HR+ + FWW
Sbjct: 115 IKNKVWAKMKGWKTSMFSVAGKEVLIKVIVQAIPTYTMSCFKLPKKTISSLHRMASRFWW 174

Query: 61  DNPEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKG 120
            + +  K+    +      PK                               + S VLK 
Sbjct: 175 GSLDKEKKIHWCKWRYLCRPKDKGGLGFRDLGMFNQALLAKQIWRCLRHPQLLCSRVLKA 234

Query: 121 RYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQ 180
            YF     + A  G   S+VWRSL+WG+ L+++G +WR+GNG  V +    WLP   + +
Sbjct: 235 SYFPRKGVLEAGCGANASFVWRSLVWGKKLILKGYRWRVGNGESVRVLEDPWLPRPVTFK 294

Query: 181 VHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEK 240
           V+  PSLP    V DL    G WDE  +RS F   D + IL IP      EDK++WH+ K
Sbjct: 295 VYDQPSLPANLYVTDLKLADGQWDEGFIRSIFNPTDVDLILGIPCSDWDFEDKILWHYSK 354

Query: 241 NGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT 300
            G YSVK GYR+A   + +   S+  S +  +WW  LW++ +P KVK F W++ HN LP 
Sbjct: 355 YGEYSVKSGYRMAASFTTEQHQSNEHSIV--QWWKKLWRLKIPPKVKHFVWKVAHNWLPA 414

Query: 301 KDNLLKR------------AGVDKE--------------WVVAGV--------------- 360
             NL KR            + VD+               W V+G+               
Sbjct: 415 NVNLAKRGIASSVVCSRCSSHVDESVAHALWECKASKGYWRVSGLYDDLKQMLGEDNLTM 474

Query: 361 --------------------------------GG------------GAVVA--------- 417
                                           GG            G  +A         
Sbjct: 475 LMRIAAEWDKEKLEFFLLVSWNIWNVRNTVVHGGYHPKPEEMIEWCGNFLADFRGDTGRE 534

BLAST of Lag0004843 vs. ExPASy TrEMBL
Match: A0A803NHG3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.0e-64
Identity = 122/307 (39.74%), Postives = 175/307 (57.00%), Query Frame = 0

Query: 1    MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWW 60
            +++RVW +++GWKG  FS G KEVL+K+IVQAIP YTM+C+RL K  I  IHR+ A FWW
Sbjct: 1206 IKNRVWNRLRGWKGHMFSMGVKEVLIKAIVQAIPAYTMSCYRLTKSTITSIHRMAARFWW 1265

Query: 61   DNPEGGKEDSLVELEIPLSPK-------------------------------VSSLVLKG 120
             +    K+    + E    PK                               + S VLK 
Sbjct: 1266 GSTAKKKKIHWCKWEYLCRPKEEGGLGFRDLELFNQALLAKQIWRCLRQPGSLCSKVLKA 1325

Query: 121  RYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQ 180
             YF   S + A  G   S+VWRSL+WG++++++G +WR+GNG  V +    WLP   S +
Sbjct: 1326 SYFPHKSVLAAKCGAHASFVWRSLVWGKEIILKGYRWRVGNGQQVRVLEDPWLPRPTSFK 1385

Query: 181  VHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEK 240
            V+  P  P   CV DL   SG WDE  +R++F   D+E ILR+P  H  LEDK++WH+ +
Sbjct: 1386 VYDKPPFPQQLCVVDLTHPSGVWDESFIRANFNREDAEMILRLPPLHEDLEDKVMWHYSR 1445

Query: 241  NGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT 277
            NG Y+V+ GYR+A    ++   ++ +  L  +WW  LWK+ +P KVK F W+L ++ LPT
Sbjct: 1446 NGEYTVRSGYRMA--AEIRKSEATLEGQLMKDWWRKLWKLKLPPKVKHFAWKLANSWLPT 1505

BLAST of Lag0004843 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 4.8e-23
Identity = 75/286 (26.22%), Postives = 119/286 (41.61%), Query Frame = 0

Query: 32  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDN-------------------PEGG---KED 91
           A+P YTM CF L K +  +I  ++A+FWW N                    EGG   K+ 
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 92  SLVELE---------IPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLL 151
               L          +     + + V K RYF  +  + A LG RPS+VW+S+   +++L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 152 MRGCQWRIGNGSLVPIYFSNWL---PNEFSLQVHSFPSLPLTSC-----VRDLFTGSG-H 211
            +G +  +GNG  + I+   WL   P   +L++   P     S      V DL   SG  
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181

Query: 212 WDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGY-RLAHRLSVQDQ 271
           W +  +   F   + + I  +  G   + D   W +  +G Y+VK GY  L   ++ +  
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241

Query: 272 PSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR 277
           P        +  +  +WK     K++ F W+   N LP    L  R
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYR 287

BLAST of Lag0004843 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-17
Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 0

Query: 87  LKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEF 146
           +K RYF   S + A +  + SY W SLL G  LL +G +  IG+G  + I   N      
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDN------ 60

Query: 147 SLQVHSFPSLPLTS-------CVRDLFTGSG---HWDEVKVRSHFTMADSEAILRIPLGH 206
              V S P  PL +        + +LF   G    WD+ K+      +D   I RI L  
Sbjct: 61  --IVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAK 120

Query: 207 LSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVK 266
               DK+IW++   G Y+V+ GY L       + P+ +      +  + +W + +  K+K
Sbjct: 121 SKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLK 180

Query: 267 FFFWRLCHNRLPTKDNLLKR 277
            F WR     L T + L  R
Sbjct: 181 HFLWRALSQALATTERLTTR 192

BLAST of Lag0004843 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 0

Query: 32  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK---------- 91
           A+P Y M+CFRL K L  ++   M  FWW + E  ++ S V  +     K          
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 92  ----------------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDL 149
                                 + S +L+ RYF  +S +  S+G RPSY WRS++ GR+L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150918.15.3e-7246.45uncharacterized protein LOC111018954 [Momordica charantia][more]
CAB4263564.16.0e-6833.40unnamed protein product [Prunus armeniaca][more]
XP_024037590.17.1e-6128.45uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_030487384.14.6e-6040.94uncharacterized protein LOC115704310 [Cannabis sativa][more]
XP_024950112.16.0e-6027.77uncharacterized protein LOC112496847 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
P0C2F61.4e-1923.40Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932951.5e-1330.20Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DAR42.5e-7246.45uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803Q0L54.5e-6930.07Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J5TIF92.9e-6833.40Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... [more]
A0A803QQT22.1e-6629.27Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NHG32.0e-6439.74Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.14.8e-2326.22Ribonuclease H-like superfamily protein [more]
AT3G09510.13.9e-1729.00Ribonuclease H-like superfamily protein [more]
ATMG00310.11.1e-1430.20RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 328..407
e-value: 3.1E-11
score: 43.2
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 213..276
e-value: 1.7E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 2..273
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..273
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 306..404
e-value: 5.29858E-12
score: 60.7908
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 302..407

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004843.1Lag0004843.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity