Lag0003227 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0003227
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	H(+)-exporting diphosphatase
Location	chr4: 49239942 .. 49246867 (-)
RNA-Seq Expression	Lag0003227
Synteny	Lag0003227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGATTCTCAAGGCCTCCGCTGTGGGCAGCATAATGTATGCAATGCTCTGCACAAGGCCTGACATCTGTGATGATGTAGGGATAGTTAGCACATATCAATCAGTATCCATGGTCAAACTTTACAAAGGAGCTATAATGTGGCATAATTACAGTCTTAACCATATAAGCCAAAAATATAGTTGCTTGTGAAGCAGCGATAGAGATTGTAAGGTTTAGAAAGTTCTTGACTGATTTGGAATGTGTTCCAAATGTGAACTTGCCCATCAGACTTTATAGTGATACAGTGGTGTTGTGGCAAATTCATCAGAACTTTCCAGCCCAAGACAAGCTCACACATTGAATTAAATTGAAATATTCACGAAGACTCTTTCGGCTAAAGGGTATGAGGGTCATCTAGAAGGTCTAGGTCTACGAGTTATGTACAAAGATGAAATCTGGGGCAAGTGGGAGAAATGTAATGGGTATAGTGATATCATCATACATTGGGTATAGTGATGCCCTAGTTTATTGTATTTGTACATTGTATATGTTTTATACATGTATTTATACACCCACTATTGAATAAGATTGTTGTACATCCCACTAAACTAGAGTTTTAGTTAAAGTGGGAGTTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTGTATACTTGTATTTAATAAAGTGTTATTTAATTTTCTGCAATAAAATGTTATTGATAAATATTGCACTATTTGACCCTAATCCAATAAACTAGACATCCTAGGCTGTAATATGAGTCTTGAACTATATGTAGCGACATATGGGGATCATTGTTCAAGAAACAACCTAAAAGGTCTATAGTATAGGGATAAGACTGGGTGCCTTATCCTGGCAACACTATGGATACGACCCACTTTGTATTTGATACAAACGCTGCGATCCAACGCGTTCGTGTAGGAGACATGCGAGTTGAGGTATCCTATGCAATGAGTTTGCATAAGACCAGACCGCGAAATAGTAACCACTGGTTATAACACCGTTAACTAGTTGGTTTTCTATTTCACTAGGACGACCTAGACAACTTAGTCTTAATCCTGAGTTGATTATGGACTCCTGCTCATGAGAGATTGTCCTTTGATTTGTATGGATGAGAGTGGCCAATACGCCGACTCAATAAGCCTACCACTTTGGGGACAAGACCGAATGAGGAGCTGGGAACATAATCGTACAAGATGGAATTCACACCTTCCCGACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTTACTCCGAGTCTTGAACAGAGGGCCTTACCCTCTCAATGGCACGAGAGGGTTTTCTGTTTGATGGTTGGACCACAAACAAGTTGTTCATTAGAGGAGAATTGGTACTTAAGGAAATAGAGGTAACCCAGGTTTCCTCTTTTCTTTAGAAAAGTTTTAAAAATAAATTTAGATTTATTTTAGCATGTTTAAACCAAATTTTACATCGGCTTTAAAGGTTGTTTAAAGTTTTGTTTGAGTTATCGTAACGGTATTTTAATGTTAATTAATATACGGCGTAAGGTCCAATCGATGCGCTTCCGCTGCGTGAGGACTTTTATTCCCTTCACATAATTGTACCTATAAAAGGATGAACTTCCATGTAAAGTTTGCAACACCAAATTTTCTACTTCAATTAGAAGTTTATTCATCTTTTGGATTTCACACTCTCTCGTTTTCTATTTTCTCTCTTTGTTCAACAAACATTGAGAGTTTGATTATTGCTTCCGCAATATTTTTTCGACCTTTCAATTTTCAATTTTCTCAACATTACCTTATAAAAAATAAAAATAATAATAAACAATACGAAATTATACTAACAATTAATTTTAAAAAGTCAAGTAGTTTTTAAAATCAAGTAAGTTACATGTTAAATTGCCTTTTCTAAGATTAAAAAAAAATATAATATAAGATTTAAGCAAAACAATTTATTATTAAAATTTAGGGCTGGTTGCAAGGATAGCAATATGGGCCAAAATAATTGCAAATCTAGCAACCCACAAAAAAAATTGCAAAAATGGCAAAATCTAATAGTTTGTGTGTTGCATTTACTAAAATACCCCTCCAGTTTTTCTTTCACTAATAGAAATTTTTTCTATCACTGATAGATTCTATCAGTGATAGAAAGATTTTCTATCAGTGATAGAAATTTTCTATCACTGATAGAAAGATTTTCTATCATGATAGAAATTTTCTATCAATGATAGATTCTATCAGTGATAGAAATTTTCTTTCACGGATAGATTCTATCATATGATAGAAAATTTTTCTACTACTGATAGATTCTATCGGCGATAGATATTTTTCTATCACTTGTTCGATGTTCTATCAGTGTTTGGTTGTTGTTATTTGGTTTTCTATCAGTGTTTGGTTTTTGCTTTTCAGTGTTTGATTTCTATAATCGTTCGTTTTTGCTTTATTTTTCAATGCTTGATTTCACCATGTATCACCATCGCTGATAGAAACAAAAGATCTTCTATCACCGATAGTAAAGTATCAGTGATAGAAAGATTTTCTATAACTCACGAAAAGTTTTTCTTTCAGTCTCAGTGATAGAGATAGAAAGTTTTTCTATCACTCATAGAAATATTTTCTATGAATGATAGAGATTTTTTCTATCACTCATAGAAAAAATTTCTATAAGTGATAGAAGATTTCTATCACTAATAGGTTCTATCAGGGATTGAAAGATTTTCTATCAAGAGTTTTCTATCATTGATAGAATATCTTTCTATCACTGATAGAATAGTAAAAATTCTATCAGTAAAAGATCGATAGAAAGCTTTTCTATCGGTGATAGAAAGCTTTTCTATCGGTGATAGAAAGTTTTTCTATCACTTATAGATTATATCGGTGATAGAAAGATTTCTATCGGAGATAGAAAGATTTTTATGGATGATCAGGGATTGAAAGATTTTTTATCAAAAGTTTTTCTATGATTTTCTATAAAAAGTTTTTTTATCACTGATATAACCTATCACTGATAGAAATCTTTTATCACTGATAGAAAAAGTTTCTATTAGTGATAGAAATCTTCTATTCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTCATAGAAATATTAGTGATAGAAACTTTCTATCGCCGATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTGATAGAAATATCACTGATAGAAACTGTATTCTATCAGTGATATAAACTTTCTATCACTAATAGAAACTTTATTCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTAATAAAAAGACTTTCTATCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGACGAGGAAGAAGAAGATGGGCACACAGGGGCAATTTAGGAATATAAAAAATTAATTAAAAAATTTTGCCATATTTGCAAATATTTTTAAAAATTGCTATATTTGTAATTATTTACCTTCATGTTGCCACCCATTACAATTATCCTAAAATTTAAGTAGCTGATGTTAGATAATTAATAGCATTAAAAAACTTTCCACTAAAACCAATTACATAAATTTAAATATAAATACTAAAAGTTCTTGTCTTTGTGATTAATGAACAAAAAATTAATCTATTCAATTAGAAAATTGAGAGTGTTTTCTCTTCAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATTGAGAGTGTGCTCAATTATTTTGGTGTTTGAAAATTTTAATTTCATTTAAAATTATGCATGCATTTATTAATTAATAAGTTTTTTTTAAGGAATAACTTAATAATTTTTAGGCTACTGAGTTTTATTTTTATTTTATTATTATCATTTTCACACTTATAAGTTTCCAACCTAAAATGTATTAATTAGTTTGTATATTAAAATACAAATTTGGTCATACATTTAGACAATTTTATTTTGGTCACTGTGGTTTTAAAAGTTTCAATTTAGTCCCAATAGTTTGAGGATAACTTCAATTTTCTTCCTATGGTTTGGATTTAGTTCCAATTTGTCTAAGTCATCCCTAAATTGTATTTTACCAACTTGAAAGTCCACGTTTTTTCTTTTTATTTTTACCTAGCCCTAAACTCCAAGTTAGTCAACTTAACACAAATTACTTAGATAGAAACTTGCTACATAAAAAAAATGGCAATATATGATAACGACAAAGAAAACTACAATAATGTAATAATCAAAATAGAAACATGCTCATAAATAAAATAAGTGATTTTCTTACGGATGACCCTCTAAAATAGACGAAAATGATAAATGTCCTACATTTTCAATTGGATATATGTCATTTTGCTTGCGTAAGCATCTTAGTAAAATTACCATTCTACTCTCTACTCTAACCTCGTTCACTTTCGCTACTCTTGCTCTCTCTCCAACCCTTTTTTTTTTTTAAAAACAGTGGAAGAAGAAAAGGGAGGGATGAAGAGGGAAGACAAATAAGGAAAAAAGGAGGAGAAGGAAGAAGAATAAAAGAGGAGAAAAATAGAAAAAAAATGAAAAACGACAGTTTTCGGCGGCGGTATCGACAACGACGGTGGCTACTGCAAATGAATTGAGATTAGGGTTTGAAGGAGAGGAGAAGAAGATTAAGGAAGAAAATGGAAGAAGAAAAAAGAAAAGAAAAAAAATAATAAAAAAGGATTTAATATAAGGTCGGTTGCAAGGATAGCAATATGGGCCAAAATAATTGCAAATCTAGCAACCCACAAAAAAAAATTGCAAAAATGGCAAAATCTAATAGTTTGTGTGTTGCATTTACTAAAATACCCCTCCAGATTTTCTTTCACTGATAGAAAGTTTTTCTATCACTGATAGATTCTATCAGTGATAGAAAGATTTTCTATCAGTGATAGAAATTTTCTATCACTGATAGATTCTATCAGTGATAGAAATTTTCTTTCACGGATAGATTCTATCATATGATAGAAAATTTTTCTACTACTGATAGATTCAATCGGCGATAGATATTTTTCTATCACTTGTTCGGTGTCTATCAATGTTTGGTTGTTGTTATTTGGTTTTCTATCAGTGTTTGGTTGTTGTTATTTGGTTTTCTATCAGTGTTTGGTTTTTGTTTTTCGGTGTTTGATTTCTATAATCGTTCGTTTTTGCTTTATTTTTCAATGCTCGATTTCACCATGTATCACCATCGCTGATAGAAACAAAAGATCTTCTATCACTGATAGAAAAGTATCAGTGATAGAAAGATTTTCTATAACTCACGAAAAGTTAGGTTCTATCAGGGATTGAAATATTTTCTATCAAGAGTTTTTTATCATTGATAGAATATCTTTCTATCACTGATAGAATAGTAAAAATTTCTATCAGTAATAGAAATCTTTTATCACTGATAGAAAGCTTTTCTATCGGTGATAGAAAGTTTTTCTATCACTTATAGATTATATCGGTGATAGAAATATTTTTATGGATGATCAGGGATTGAAAGATTTTTTATCAAAAGTTTTTCTATGATTTTCTATAAAAAGTTTTTTTTTATCACTGATAGAACCTATCAGTGATAAAAATCTTTTATCACTGATAGAAAAAGTTTCTATTAGTGATAGAAATCTTCTATTCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTCATAGAAATATTAGTGATAGAAACTTTCTATCGTCAATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTGATAGAAATATCACTGATAGAAATTTTATTCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAAATTTTCTACCACTGATAGAATCTATCAGTAATAAAAAGACTTTCTATCAGTAAATAATAATAAAAAAAAATTAAAAAAAAACAAAAAAAAAAACTGACGAGAAAGAAGAAGATGGGCACACATGGGCAATTTAGGAATATCAAAAATTAATTAAAAAATTTTGCCATATTTGCAAATATTTTTAAAAATTGCTATATTTGCAATTATTTACCTTCATGTTGCCACCCATTACAATTATCCTTTAATATATTGTTTTATTTGAAAAAAATTAAAAATATATTTTTTAAAATAAAAACCAATTGCCATTCATTCTGTTTCAAGGACGAAAAGTGTAATGAAATCCAAAAGAGACCAAAAAGTGTATTTTTTCCTTACTTTACATCCGTATCAGGAGGCTCGGTTGGTTTGAATTACCGCCCTAATCTTATTTACTGGAGAGCAAAGTGAATGGAAGTAGGTTTTAATTAGATTTGAAGGTCTCCAGTTCATGAACCGGGAATTCTTTGCTATTCTCCTGTAATTGGTGTTTTCAATATTCTAGTCCGTGGCTGGTTAGTTAGGAAATTCCAAAATTCAGCGACCAGGGTCAGGGGGCGATTTGCCCCAGGGTGGCGAGTACAGCCCTTATCCTATTGCCCGGAGGGTAAATTCCTCCCATACGGTGGTCATGGATGATGACATTGAAAATGCTAGTTTGGGGGCATACCAGGACAGGCAAAGGACTTTTCCTGACATGCGTTGTAAAGTCAACACCCCATTGGTGAGTACCTTAACCCTGCCAATCATCTGCGTTCTAATTTCAATGTATGTTGATATATTTACTGCTGGTTTGAAAAACGTGATTTTCTGACTTCTACCATGTTCTTCTATTGTATTATCTTCTTAATGACTTAACTAGCAATATTATGAAGTTATATGGTTATTTAGTTGCTTAGCATATCACAACTGAACTTGATGGACGCTATATTTGAATTACATTGTCTTGTATGATTAAGGTCTAGGTTGTTCCAGGTCACATCCTGTTGTTATTTTTTTGTATTGGATTTTACAGGGTTTAGGGTTTTAA

mRNA sequence

ATGAGACAGATTCTCAAGGCCTCCGCTGTGGGCAGCATAATGTATGCAATGCTCTGCACAAGGCCTGACATCTGTGATGATGTAGGGATAGTTAGCACATATCAATCATTAGGAAATTCCAAAATTCAGCGACCAGGGTCAGGGGGCGATTTGCCCCAGGGTGGCGAGTACAGCCCTTATCCTATTGCCCGGAGGGTAAATTCCTCCCATACGGTGGTCATGGATGATGACATTGAAAATGCTAGTTTGGGGGCATACCAGGACAGGCAAAGGACTTTTCCTGACATGCGTTGTAAAGTCAACACCCCATTGGGTTTAGGGTTTTAA

Coding sequence (CDS)

ATGAGACAGATTCTCAAGGCCTCCGCTGTGGGCAGCATAATGTATGCAATGCTCTGCACAAGGCCTGACATCTGTGATGATGTAGGGATAGTTAGCACATATCAATCATTAGGAAATTCCAAAATTCAGCGACCAGGGTCAGGGGGCGATTTGCCCCAGGGTGGCGAGTACAGCCCTTATCCTATTGCCCGGAGGGTAAATTCCTCCCATACGGTGGTCATGGATGATGACATTGAAAATGCTAGTTTGGGGGCATACCAGGACAGGCAAAGGACTTTTCCTGACATGCGTTGTAAAGTCAACACCCCATTGGGTTTAGGGTTTTAA

Protein sequence

MRQILKASAVGSIMYAMLCTRPDICDDVGIVSTYQSLGNSKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDRQRTFPDMRCKVNTPLGLGF

Homology

[Close]

BLAST of Lag0003227 vs. NCBI nr
Match: KAA0059327.1 (pyrophosphate-energized membrane proton pump 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 40  SKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDRQRTFPDMRCK 99
           SKIQRPGSGGDLPQGGEY+PYP+ARRVNSSHTV+MDDDIE+ASLG YQDRQRTFPDMR K
Sbjct: 730 SKIQRPGSGGDLPQGGEYNPYPVARRVNSSHTVLMDDDIESASLGVYQDRQRTFPDMRSK 789

Query: 100 VNTPL 105
           VNTPL
Sbjct: 790 VNTPL 794

[Close]

BLAST of Lag0003227 vs. NCBI nr
Match: TYK04000.1 (pyrophosphate-energized membrane proton pump 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 40  SKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDRQRTFPDMRCK 99
           SKIQRPGSGGDLPQGGEY+PYP+ARRVNSSHTV+MDDDIE+ASLG YQDRQRTFPDMR K
Sbjct: 725 SKIQRPGSGGDLPQGGEYNPYPVARRVNSSHTVLMDDDIESASLGVYQDRQRTFPDMRSK 784

Query: 100 VNTPL 105
           VNTPL
Sbjct: 785 VNTPL 789

[Close]

BLAST of Lag0003227 vs. NCBI nr
Match: KAG7013924.1 (Pyrophosphate-energized membrane proton pump 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 38  GNSKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDRQRTFPDMR 97
           G SKIQRPGSGGDLPQGGE++PYPIARRVNSSHTVVMDDDIE+ASLG YQDR RTFPDMR
Sbjct: 50  GISKIQRPGSGGDLPQGGEFNPYPIARRVNSSHTVVMDDDIESASLGVYQDRPRTFPDMR 109

Query: 98  CKVNTPL 105
            KVNTPL
Sbjct: 110 SKVNTPL 116

[Close]

BLAST of Lag0003227 vs. NCBI nr
Match: CAB4302606.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 30  IVSTYQSLGNSKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDR 89
           I+S+     N KIQRPGSG DLPQGGEYSP+P+AR+VNSSH++VMD D+E+ +LG YQDR
Sbjct: 31  ILSSEDCWTNFKIQRPGSGADLPQGGEYSPFPVARKVNSSHSMVMDVDVEDGNLGPYQDR 90

Query: 90  QRTFPDMRCKVNTPL 105
            RTFP+MR K   PL
Sbjct: 91  PRTFPNMRGKSYNPL 105

[Close]

BLAST of Lag0003227 vs. NCBI nr
Match: RXH67506.1 (hypothetical protein DVH24_027653 [Malus domestica])

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-19
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 41  KIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGAYQDRQRTFPDMRCKV 100
           KIQRPGSGGDLPQGGEYSP+P+AR+VNS H+VVMD D+E  +LG YQDR RTFP+MR K 
Sbjct: 5   KIQRPGSGGDLPQGGEYSPFPVARKVNSIHSVVMDVDVEGGNLGPYQDRPRTFPNMRGKS 64

Query: 101 NTPL 105
             PL
Sbjct: 65  YNPL 68

[Close]

BLAST of Lag0003227 vs. ExPASy Swiss-Prot
Match: Q9FWR2 (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana OX=3702 GN=AVPL2 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-04
Identity = 18/33 (54.55%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 72  VVMDDDIENASLGAYQDRQRTFPDMRCKVNTPL 105
           ++MD+D+E A+L +Y D+ RTFPDMR K  +PL
Sbjct: 1   MMMDEDVEQATLVSYSDKPRTFPDMRSKTYSPL 33

[Close]

BLAST of Lag0003227 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.6e-04
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 1    MRQILKASAVGSIMYAMLCTRPDICDDVGIVSTY 35
            M ++  +SAVGS+MYAM+CTRPDI   VG+VS +
Sbjct: 1106 MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRF 1139

The following BLAST results are available for this feature:

BLAST of Lag0003227 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059327.1	1.1e-26	90.77	pyrophosphate-energized membrane proton pump 2-like [Cucumis melo var. makuwa]	[more]
TYK04000.1	1.1e-26	90.77	pyrophosphate-energized membrane proton pump 2-like [Cucumis melo var. makuwa]	[more]
KAG7013924.1	2.4e-26	89.55	Pyrophosphate-energized membrane proton pump 3, partial [Cucurbita argyrosperma ...	[more]
CAB4302606.1	9.8e-20	65.33	unnamed protein product [Prunus armeniaca]	[more]
RXH67506.1	4.9e-19	73.44	hypothetical protein DVH24_027653 [Malus domestica]	[more]

BLAST of Lag0003227 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWR2	2.7e-04	54.55	Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
P10978	4.6e-04	58.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0003227.1	Lag0003227.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0016104	triterpenoid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet
molecular_function	GO:0042300	beta-amyrin synthase activity
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0000250	lanosterol synthase activity
molecular_function	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity