Lag0002754 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGCCTTATTCCTTTCTCTAACCCCCTTAACGTGTCGGACGGCTCGTTGAATGGGGGCCCCATCGGTAATTGGCCCTCGGGGTGGGCAGCTTTAGCTTCTGTAGGCATTCAAGCAATTCCCCCGAAGGAATGTCAAGTAACTCCTATCTCTACGGACAAGGTTCCGATCGTCAGTAAGGATGAGGGGGGTAAAAAGAAGTTGATTGACAAGGTGGATAGGGTGGAGAAGGAGCTTAGGAAGCTGAGTAGCTCGGTTAATTATGACAAAAAGAGGGCTTCTAAGAAAGTCGGGGAGGTGTCGGTTTCCCAATGATAGTGCTGTCTTGGAATGTGAGGGGTGTGGGGGGTAAAGTTAAGCGTCGTCTGGTGAAAGAGTCTATTGCTCAAGAAAATCCGGATATTGTCATTTTAGTGGAGACTAAAAGAGGTAGCTTTAATCGTCATCTGGTGAATAGCTTATGGGGCAGCAGGTATGTGGATTGGGAGATTCTTGAGGCGGAGGGGGCCTCAGGAGGCATCGCCATTCTCTGGGATAGTAGGGTGGTTACCCCGATCGAAGTCATTAAGGGTTCGTTTTCCGTTTCGATTTCTTTTCGGCTGAAGGATGAGTCAGTTAGTTGGGTGACAGGAGTTTATGGCCCCCCGAGAAGTAGAGGAAGGTCGGATTTTTGGAAGGAGCTGGAGGATCTTTATGGCCTTTGTGGTGATTGTTGGTGTGTGGCTGGGGATTTTAATGTGATCCGATCGCCCGTCGAGAGATCTTCCGGGGGTAGATTCTCTAGATCTATGACCCAGTTCAATAAGTTCATTGAGGGGTCGTGCCTTACGGATCCTCGTTGGTGA ATGGGCAGCCTTATTCCTTTCTCTAACCCCCTTAACGTGTCGGACGGCTCGTTGAATGGGGGCCCCATCGGTAATTGGCCCTCGGGGTGGGCAGCTTTAGCTTCTGTAGGCATTCAAGCAATTCCCCCGAAGGAATGTCAAGTAACTCCTATCTCTACGGACAAGGTTCCGATCGTCAGTAAGGATGAGGGGGTTAAGCGTCGTCTGGTGAAAGAGTCTATTGCTCAAGAAAATCCGGATATTGTCATTTTAGTGGAGACTAAAAGAGGTAGCTTTAATCGTCATCTGGTGAATAGCTTATGGGGCAGCAGGTATGTGGATTGGGAGATTCTTGAGGCGGAGGGGGCCTCAGGAGGCATCGCCATTCTCTGGGATAGTAGGGTGGTTACCCCGATCGAAGTCATTAAGGGTTCGTTTTCCGTTTCGATTTCTTTTCGGCTGAAGGATGAGTCAGTTAGTTGGGTGACAGGAGTTTATGGCCCCCCGAGAAGTAGAGGAAGGTCGGATTTTTGGAAGGAGCTGGAGGATCTTTATGGCCTTTGTGGTGATTGTTGGTGTGTGGCTGGGGATTTTAATGTGATCCGATCGCCCGTCGAGAGATCTTCCGGGGGTAGATTCTCTAGATCTATGACCCAGTTCAATAAGTTCATTGAGGGGTCGTGCCTTACGGATCCTCGTTGGTGA ATGGGCAGCCTTATTCCTTTCTCTAACCCCCTTAACGTGTCGGACGGCTCGTTGAATGGGGGCCCCATCGGTAATTGGCCCTCGGGGTGGGCAGCTTTAGCTTCTGTAGGCATTCAAGCAATTCCCCCGAAGGAATGTCAAGTAACTCCTATCTCTACGGACAAGGTTCCGATCGTCAGTAAGGATGAGGGGGTTAAGCGTCGTCTGGTGAAAGAGTCTATTGCTCAAGAAAATCCGGATATTGTCATTTTAGTGGAGACTAAAAGAGGTAGCTTTAATCGTCATCTGGTGAATAGCTTATGGGGCAGCAGGTATGTGGATTGGGAGATTCTTGAGGCGGAGGGGGCCTCAGGAGGCATCGCCATTCTCTGGGATAGTAGGGTGGTTACCCCGATCGAAGTCATTAAGGGTTCGTTTTCCGTTTCGATTTCTTTTCGGCTGAAGGATGAGTCAGTTAGTTGGGTGACAGGAGTTTATGGCCCCCCGAGAAGTAGAGGAAGGTCGGATTTTTGGAAGGAGCTGGAGGATCTTTATGGCCTTTGTGGTGATTGTTGGTGTGTGGCTGGGGATTTTAATGTGATCCGATCGCCCGTCGAGAGATCTTCCGGGGGTAGATTCTCTAGATCTATGACCCAGTTCAATAAGTTCATTGAGGGGTCGTGCCTTACGGATCCTCGTTGGTGA MGSLIPFSNPLNVSDGSLNGGPIGNWPSGWAALASVGIQAIPPKECQVTPISTDKVPIVSKDEGVKRRLVKESIAQENPDIVILVETKRGSFNRHLVNSLWGSRYVDWEILEAEGASGGIAILWDSRVVTPIEVIKGSFSVSISFRLKDESVSWVTGVYGPPRSRGRSDFWKELEDLYGLCGDCWCVAGDFNVIRSPVERSSGGRFSRSMTQFNKFIEGSCLTDPRW Homology
BLAST of Lag0002754 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis]) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-39 Identity = 80/160 (50.00%), Postives = 108/160 (67.50%), Query Frame = 0
BLAST of Lag0002754 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis]) HSP 1 Score: 168.7 bits (426), Expect = 5.8e-38 Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 0
BLAST of Lag0002754 vs. NCBI nr
Match: CAN74319.1 (hypothetical protein VITISV_035345 [Vitis vinifera]) HSP 1 Score: 168.7 bits (426), Expect = 5.8e-38 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 0
BLAST of Lag0002754 vs. NCBI nr
Match: RVW78901.1 (hypothetical protein CK203_043153 [Vitis vinifera]) HSP 1 Score: 167.5 bits (423), Expect = 1.3e-37 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Lag0002754 vs. NCBI nr
Match: CAN68165.1 (hypothetical protein VITISV_008538 [Vitis vinifera]) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-37 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Lag0002754 vs. ExPASy TrEMBL
Match: M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 2.3e-40 Identity = 80/160 (50.00%), Postives = 109/160 (68.12%), Query Frame = 0
BLAST of Lag0002754 vs. ExPASy TrEMBL
Match: M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 3.0e-40 Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 0
BLAST of Lag0002754 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 80/160 (50.00%), Postives = 108/160 (67.50%), Query Frame = 0
BLAST of Lag0002754 vs. ExPASy TrEMBL
Match: A5B9F0 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_035345 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.8e-38 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 0
BLAST of Lag0002754 vs. ExPASy TrEMBL
Match: A0A4Y1RS61 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.8e-38 Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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