Lag0002625 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0002625
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDUF761 domain-containing protein
Locationchr4: 44342622 .. 44343149 (+)
RNA-Seq ExpressionLag0002625
SyntenyLag0002625
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAGAAAAACGCCAATAATGTGGGCCGTAGAGCATGGAACCTTCTTCGCCTAGCAATCATATGGGCAAGAAAAGGTGCCCTTCTCAAGCCACGCTTCCTCATGGACCTCCGCCTCCTGCCCAAGTTCATCAAGAGCCTCGCCCACTCCACCCCCCGTGCCCACCTACATTACGGCGATCACGAGCTCTCCTTCGACGAAACGCCCATTTTCCATGTCAAGATGAATCGCCCCGCCTCGATGCGCTTCCACTTCCCCTGCATTACCCCGCACGTCGATTTCGAATATGAGTTTCATGGCAATGTCGATGTCGATGTCGATGGCGATGGTAGTGAAATTTGTAGCTACGATGGAGAGCGGAGGAGTTCGGGATATGATGGTGGGGAGGAACGAGATGATGATGACGACGATGAAGAAGAAGATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAATTCTATGAGCAAATGAAAATGCAAAGACAGATTTCGTTTTCGCAATATGATCATAAGAGTCTATGA

mRNA sequence

ATGCCAAAGAAAAACGCCAATAATGTGGGCCGTAGAGCATGGAACCTTCTTCGCCTAGCAATCATATGGGCAAGAAAAGGTGCCCTTCTCAAGCCACGCTTCCTCATGGACCTCCGCCTCCTGCCCAAGTTCATCAAGAGCCTCGCCCACTCCACCCCCCGTGCCCACCTACATTACGGCGATCACGAGCTCTCCTTCGACGAAACGCCCATTTTCCATGTCAAGATGAATCGCCCCGCCTCGATGCGCTTCCACTTCCCCTGCATTACCCCGCACGTCGATTTCGAATATGAGTTTCATGGCAATGTCGATGTCGATGTCGATGGCGATGGTAGTGAAATTTGTAGCTACGATGGAGAGCGGAGGAGTTCGGGATATGATGGTGGGGAGGAACGAGATGATGATGACGACGATGAAGAAGAAGATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAATTCTATGAGCAAATGAAAATGCAAAGACAGATTTCGTTTTCGCAATATGATCATAAGAGTCTATGA

Coding sequence (CDS)

ATGCCAAAGAAAAACGCCAATAATGTGGGCCGTAGAGCATGGAACCTTCTTCGCCTAGCAATCATATGGGCAAGAAAAGGTGCCCTTCTCAAGCCACGCTTCCTCATGGACCTCCGCCTCCTGCCCAAGTTCATCAAGAGCCTCGCCCACTCCACCCCCCGTGCCCACCTACATTACGGCGATCACGAGCTCTCCTTCGACGAAACGCCCATTTTCCATGTCAAGATGAATCGCCCCGCCTCGATGCGCTTCCACTTCCCCTGCATTACCCCGCACGTCGATTTCGAATATGAGTTTCATGGCAATGTCGATGTCGATGTCGATGGCGATGGTAGTGAAATTTGTAGCTACGATGGAGAGCGGAGGAGTTCGGGATATGATGGTGGGGAGGAACGAGATGATGATGACGACGATGAAGAAGAAGATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAATTCTATGAGCAAATGAAAATGCAAAGACAGATTTCGTTTTCGCAATATGATCATAAGAGTCTATGA

Protein sequence

MPKKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMDLRLLPKFIKSLAHSTPRAHLHYGDHELSFDETPIFHVKMNRPASMRFHFPCITPHVDFEYEFHGNVDVDVDGDGSEICSYDGERRSSGYDGGEERDDDDDDEEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYDHKSL
Homology
BLAST of Lag0002625 vs. NCBI nr
Match: XP_038899391.1 (uncharacterized protein LOC120086700 [Benincasa hispida])

HSP 1 Score: 272.7 bits (696), Expect = 2.2e-69
Identity = 139/170 (81.76%), Postives = 152/170 (89.41%), Query Frame = 0

Query: 3   KKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMDLRLLPKFIKSLAHSTPRAHLHYGDH 62
           +K  +NVGRRAWNLLRLA++WARKG + K +FLMDLRL+PKFIKSL HSTPR HLHYGDH
Sbjct: 2   QKKHSNVGRRAWNLLRLAMMWARKGGVFKRKFLMDLRLVPKFIKSLGHSTPRGHLHYGDH 61

Query: 63  ELSFDETPIFHVKMNRPASMRFHFPCITPH-VDFEYEFHGNVDVDVDGDGSEICSYDGER 122
           ELSFDETP+FHVKM+RPASMRFHFPCITP  VDF+YEF G+ D D D D SE+CSYDGER
Sbjct: 62  ELSFDETPVFHVKMHRPASMRFHFPCITPQAVDFKYEFDGDGDTD-DEDVSEVCSYDGER 121

Query: 123 RSSGYDGGEERDDDDDDEEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYD 172
           RSSGYDGGEER+DD DD EED IDLRAEKFIAEFYEQMKMQRQISFSQYD
Sbjct: 122 RSSGYDGGEEREDDKDD-EEDAIDLRAEKFIAEFYEQMKMQRQISFSQYD 169

BLAST of Lag0002625 vs. NCBI nr
Match: XP_004136158.2 (uncharacterized protein LOC101220264 [Cucumis sativus] >KGN44997.1 hypothetical protein Csa_015995 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 139/178 (78.09%), Postives = 153/178 (85.96%), Query Frame = 0

Query: 3   KKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMDLRLLPKFIKSLAHSTPRAHLHYGDH 62
           + N NNVGRRAWNLLRLA+IWARKG + K RFLMDLRL+PKFIKSL HSTPR  LHYGDH
Sbjct: 5   RHNTNNVGRRAWNLLRLAMIWARKGGVFKRRFLMDLRLVPKFIKSLGHSTPRGQLHYGDH 64

Query: 63  ELSFDETPIFHVKMNRPASMRFHFPCITPH-VDFEYEFHGNVDVDVDGDGSEICSYDGER 122
           ELSFDETP+FHVKM+RPAS+RFHFPCITP  VDF+YEF GN D D D D SE+CS D ER
Sbjct: 65  ELSFDETPVFHVKMHRPASLRFHFPCITPQVVDFKYEFEGNAD-DDDDDVSEVCSSDDER 124

Query: 123 RS-SGYDGGEERDDDDDD----EEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYDHKS 175
           RS SGYDGGEER+DDDDD    E+++GIDLRAEKFIAEFYEQMKMQRQISFSQYD  +
Sbjct: 125 RSLSGYDGGEEREDDDDDNEDGEDQNGIDLRAEKFIAEFYEQMKMQRQISFSQYDRSN 181

BLAST of Lag0002625 vs. NCBI nr
Match: XP_008451654.1 (PREDICTED: uncharacterized protein LOC103492886 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-66
Identity = 139/178 (78.09%), Postives = 149/178 (83.71%), Query Frame = 0

Query: 1   MPKKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMDLRLLPKFIKSLAHSTPRA-HLHY 60
           M  K   NVGRRAWNLLRLA+IWARKG + K RFLMDLRL+PKFIKSL HSTPR  HLHY
Sbjct: 1   MQNKRHTNVGRRAWNLLRLAMIWARKGGVFKRRFLMDLRLVPKFIKSLGHSTPRGRHLHY 60

Query: 61  GDHELSFDETPIFHVKMNRPASMRFHFPCITPH-VDFEYEFHGNVDVDVDGDG-SEICSY 120
           GDHELSFDETP+FHVKM+RPAS+RFHFPCITP  VDF+YEF  N D D D D  SE+CS 
Sbjct: 61  GDHELSFDETPVFHVKMHRPASLRFHFPCITPQAVDFKYEFDANADDDDDDDDVSEVCSS 120

Query: 121 DGERRSSGYDGGEERDDDDDDEEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYDHKSL 176
           D ERRSSGYDGGEER+DDD   EE+GIDLRAEKFIAEFYEQMKMQRQISFSQYD   L
Sbjct: 121 DDERRSSGYDGGEEREDDD---EENGIDLRAEKFIAEFYEQMKMQRQISFSQYDKNRL 175

BLAST of Lag0002625 vs. NCBI nr
Match: XP_023549395.1 (uncharacterized protein LOC111807760 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 133/173 (76.88%), Postives = 148/173 (85.55%), Query Frame = 0

Query: 1   MPKKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMD-LRLLPKFIKSLAHSTPRAHLHY 60
           MP+KN +NVGRRAWN LRLAIIWARKG + K RFLMD LRL+PKFIK+L HSTPR HLHY
Sbjct: 1   MPRKN-SNVGRRAWNFLRLAIIWARKGGVFKRRFLMDHLRLVPKFIKTLGHSTPRGHLHY 60

Query: 61  GDHELSFDETPIFHVKMNRPASMRFHFPCITPH-VDFEYEFHGNVDVDVDGDGSEICSYD 120
           GDHELSFDETP+FH+KM+RP SMRFH PCITP  VDFEYEF    D D D DGSE+ S  
Sbjct: 61  GDHELSFDETPVFHIKMHRPTSMRFHIPCITPETVDFEYEFED--DCDSDDDGSEVYSQG 120

Query: 121 GERRSSGYDGGEERDDDDDDEEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYD 172
            ERRSSGYDGGEE+ +D+++ EE+GIDLRAEKFIAEFYEQMKMQRQISFSQYD
Sbjct: 121 SERRSSGYDGGEEQ-EDEEEVEENGIDLRAEKFIAEFYEQMKMQRQISFSQYD 169

BLAST of Lag0002625 vs. NCBI nr
Match: XP_022953913.1 (uncharacterized protein LOC111456316 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-63
Identity = 132/173 (76.30%), Postives = 149/173 (86.13%), Query Frame = 0

Query: 1   MPKKNANNVGRRAWNLLRLAIIWARKGALLKPRFLMD-LRLLPKFIKSLAHSTPRAHLHY 60
           MP+KN +NVGRRAWN LRLAIIWARKG + K RFLMD LRL+PKFIK+L HSTPR HLHY
Sbjct: 1   MPRKN-SNVGRRAWNFLRLAIIWARKGGVFKRRFLMDHLRLVPKFIKTLGHSTPRGHLHY 60

Query: 61  GDHELSFDETPIFHVKMNRPASMRFHFPCITPH-VDFEYEFHGNVDVDVDGDGSEICSYD 120
           GDHELSFDETP+FH+KM+RP SMRFH PCITP  VDFEYEF    D D D DGSE+ S D
Sbjct: 61  GDHELSFDETPVFHIKMHRPTSMRFHLPCITPETVDFEYEFED--DCDSDDDGSEVHSQD 120

Query: 121 GERRSSGYDGGEERDDDDDDEEEDGIDLRAEKFIAEFYEQMKMQRQISFSQYD 172
            ERRSSGY+GGEE+ +D+++ EE+GIDLRAEKFIA+FYEQMKMQRQISFSQYD
Sbjct: 121 SERRSSGYEGGEEQ-EDEEEVEENGIDLRAEKFIAKFYEQMKMQRQISFSQYD 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038899391.12.2e-6981.76uncharacterized protein LOC120086700 [Benincasa hispida][more]
XP_004136158.21.2e-6778.09uncharacterized protein LOC101220264 [Cucumis sativus] >KGN44997.1 hypothetical ... [more]
XP_008451654.11.0e-6678.09PREDICTED: uncharacterized protein LOC103492886 [Cucumis melo][more]
XP_023549395.13.1e-6376.88uncharacterized protein LOC111807760 [Cucurbita pepo subsp. pepo][more]
XP_022953913.15.2e-6376.30uncharacterized protein LOC111456316 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 142..171
e-value: 2.2E-12
score: 46.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..144
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 6..172
NoneNo IPR availablePANTHERPTHR33265:SF5COTTON FIBER PROTEINcoord: 6..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0002625.1Lag0002625.1mRNA