
Lag0002623 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGCCGACCCCAACTCCGACGACGACAGGAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCGCTTTACTCCAGCGTTTTCTCGGGCAACATTGGCGGCGGCGGTGGTTCTAGATTTCTGCCTCGGAGCGGTAACGGCTACTTTGCGGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAATTGGGAGGTGAAAAGGGATCATCAACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGCCGACCCCAACTCCGACGACGACAGGAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCGCTTTACTCCAGCGTTTTCTCGGGCAACATTGGCGGCGGCGGTGGTTCTAGATTTCTGCCTCGGAGCGGTAACGGCTACTTTGCGGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAATTGGGAGGTGAAAAGGGATCATCAACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTGTTCGGGTTCCCACTGGTCGAACACGACGACCTTCCGACGGAGACGCCCGACGGCAGCGGCGCCGACCCCAACTCCGACGACGACAGGAAGTTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCGCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGGCGCCGCTTTACTCCAGCGTTTTCTCGGGCAACATTGGCGGCGGCGGTGGTTCTAGATTTCTGCCTCGGAGCGGTAACGGCTACTTTGCGGCGGCGTACGGCGGCGTATCGGCGGCTTCAGGGCGGTGGATGTTTGGGAATTCGGGTGAAGGGTGTAAATTGGGAGGTGAAAAGGGATCATCAACAGATCATGTGGGTGTTGTTGATCTTCATCTTAAACTTTCTCCATCTGGTTCATGA MSNQNPSSILKLFGFPLVEHDDLPTETPDGSGADPNSDDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPAPLYSSVFSGNIGGGGGSRFLPRSGNGYFAAAYGGVSAASGRWMFGNSGEGCKLGGEKGSSTDHVGVVDLHLKLSPSGS Homology
BLAST of Lag0002623 vs. NCBI nr
Match: XP_023514545.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 267.3 bits (682), Expect = 9.0e-68 Identity = 143/173 (82.66%), Postives = 144/173 (83.24%), Query Frame = 0
BLAST of Lag0002623 vs. NCBI nr
Match: XP_023004876.1 (zinc finger protein GIS3-like [Cucurbita maxima]) HSP 1 Score: 265.0 bits (676), Expect = 4.4e-67 Identity = 142/173 (82.08%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Lag0002623 vs. NCBI nr
Match: KAG7025578.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66 Identity = 145/178 (81.46%), Postives = 145/178 (81.46%), Query Frame = 0
BLAST of Lag0002623 vs. NCBI nr
Match: XP_008451655.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo]) HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60 Identity = 141/185 (76.22%), Postives = 143/185 (77.30%), Query Frame = 0
BLAST of Lag0002623 vs. NCBI nr
Match: KAA0046676.1 (zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger protein 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60 Identity = 141/188 (75.00%), Postives = 143/188 (76.06%), Query Frame = 0
BLAST of Lag0002623 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11 Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of Lag0002623 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.5e-09 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Lag0002623 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08 Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of Lag0002623 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.3e-08 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of Lag0002623 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 35/93 (37.63%), Postives = 43/93 (46.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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