Lag0002498 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002498
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	tRNA pseudouridine synthase
Location	chr4: 43359156 .. 43362622 (-)
RNA-Seq Expression	Lag0002498
Synteny	Lag0002498

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAAAACCAGAAGCATAGGCTAGAATACAGTTCCGACTCATCACCTCAAAGGCCGTTGAAAATTGGAAAGATCACGGACGAAGTTCTCGGCAGCGACACGGAGGAAGCAGAAGCCATGAACCGTAAACCTGGAATCCAACGCTATCTAGTTGCAGTCGAGTATATAGGAACTCGTTTTTCAGGGTCTCAGAAGCAGCCCAATTGCCGTACGGTGGTTGGCGTGCTGGAGGTACTTGCCAATTTTTCTCTACACTGCATATCTTTCTTATCAAAGATGTTTTGAGAATTTGTTACCCAAGGACTCGGAAGATGAACTTTTCCAAGTTATATAGTTCCTTTTTTAAAATAATCATTGGCGATGAATATGAAATATCTAGACTGGTATGTTGCATCAAGTAACATTTATGAAGAATCTTTATTGTTTGACACTTTGTATCAGTTCCAAGTTACGGTAATGCCATTGACTTAAGTCCAAGTTCTATTTTTGCCTTTATCTTCATTAAAACCATTTGAAAAGTAAGATTTGTTTTTGAACAATGGATCTCCTGCGTTACACTGTGTGGTTCGTTTCATTCAAAATGATTACTTTACATTTGTCAGGAAGCGTTTCAGAAATTCATCGGTCAATCAGTTCCAGTGTTTTGTTCTAGCAGAACAGTAAGTGTACTTCTGGATATTGGTTCCTTTTTGCCATATATAAATCAATTTTGTTGTTGTTATTAATTTGTTATGTGTACTCATAGGATAATATTAAACCAGATGAGAAACTTAAATTGAAAAGTATTTTGGAGACCTATATCTCCCAAGGTTCCACGACTTTTATCTTGTTGATTCAGATTCTTCAGTGCTCTGGTAGTTTTCTTCCACTAGGTTTGATGTGTGAAGAGAGAAAGATATGTAATTGTAACTGATAGTGATAGTTTGACTATTGGCTTGCCGCTGGTAAAATTCTTGGACTTGTGTTGATTTGAGGTATATGGTCTTACCTTTCCAAATCGATTTTTAAAACAAATCCATTGAATTTTTTTAGGATAAGTTGTTCGTCTAGCTTGTTTGTAGCAGACTGCAGTGCATCTTGCATCATATTCGTCTGTTCTGAAGCATGCATGGTAGAAGGGGATCCATGATTGAACTGCTTTTTTGGTTGTATTGATTGCTTAGCAAAAGAAAATACAATTTTTATCTACTCGAAATTTATGGACCAACCTTATTCTTATAAATTGTTTTAGAAAAAATCTGCACTTTCTGGCATTTTCTGTGAATTATGCATCTTCTAGTTTTGTTGTGAAGACCAAGTATTTTCTTGTGCAACTATAACGCTTGGATTTTTTTTCTTTTGCTTTCTATGAGCTCTTTGACTCTTTGTATCATTGTCATCCATGTTTCCATGCACTTTATTACTTTTCTTGCTAACATATGTATGTCAGGTAATTCCGTACATGTTATGACTTTCATTCTTTTTTCAACCAAGGATGCTGGAGTCCATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGGTTTGTCCCTTTATAATAGAATACCAGTATCCCTCTCTCCTCTCAATATGTACACAACTAGATGGGTGAACTTTATCTAAAAACATTAGTTCACTCATTGACTTTAGTGTCCTTAGAAATGCTACTTAACTTTGCCACAAGGATGCTAACTTTCCAACTATCATGCAGTTAACTCCACATGAACCGCAAGTCGTTCGTAGGGCTGTGAATCATTTCTTACAGGTTTGGTTTCCCTCAGACCAATCACTTTTTTGAGCTACTGCTGCTCTCAATTTCCCACGCTTTGATCGGTTGATTCATTTGCTAATAAACATAGCTCAATTATGTATACTCGACCAAGAGATTGAATCCCCCCACTCCACATATTATTAAAAAAAAACTGTTGCTTCATTTTAAAGTGAACAAGGTTACATGCAATAGTCTTGTTAAAATTGCATTTTTTCAAAAAAAAAAAAAATGTCTGGTTAAAATTGCCTTTTTCCAGTTTATAAATTTTATCTTCCTTTCTAAATTTGCAAGAACCTTAGAACTGTGCTAAGGAGAGTTCTTCCCTTTTACCATTACTATTGTTCAGGGGTTACAGATAAGCGAGCACCTTAAGAGAAAACTCCACTTTTTCCAGCTGGAGCCGTTGTTTTTTTTTCTGTAACAAAGAAAATGAGGAAACTTATCTGTGTTGGTTTTGATTTCAGAAACAGGAAGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTTTCATGCTAGATATAAAGCTCAAGAGCGTACGTGAGTATCATCTATCAGTGCAGTAGTAGTTGATACTGTTGTCATATAATAGATAGTAGAATTGGTTATAAAGGTCATACTAGAGCGATTTGAATGTGATGGGTGTTAGAATAATTTTTTGTAGCTCGTGAAATATTTTCAGCTACTTTTATCGGTTAGTTTCTGGTCCAGAAACTTTGTCAAGTTTTGAGAAGGATCGGGCATGGCACGTGCCCGAGACATTGAATATTGAGGCGATGCAGGTATGAACAAATAGCGATGCAATGCTGGACATCATGTAGTTTTCTAATTACATTCTGGAAACTGATGCAACATTATTGGTATGTTTGAATTCAGGGGGCATGCAAAGTGCTTGTTGGGCATCATGATTTTAGTTCCTTCAGGGCAGCTGGTTGTCAGGTCGTTTAATACTAAAATTATTCATGTTCTCTCTGGTTTTTATTCAATAGGCAGGTTATTATACATTTTGTTTGTAATGGAAGCTAGGGCTAGAGCATAGGGTTTCGTGTAATGTACATAAATTAGTTTAGACGTGCAGTGCAGGCAAACTCGCCAATCAGAACTCTGGATGAACTAGACGTTTGTGAGGTGGTTTCAACGCCTTATTTTCCAACAGAAATGGAGCGAAAACAAAGGCAAGGTAAAGAAGAAACCAGGAACGAAGTGCCACATTCTGAAACATGTGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTCTTGTGGTGACAGCACGAGCACGCTCTTTTCTCTATCATCAGGTATAGCTTAACAGTAGGAGACTGCTTGTTTTCTTGTTAAGGGGTCTGAGATTGATTGGTCATTGCTCAGGTGAGGCTGATGGTTGGAGTTCTTAAAGCGGTCGGCACCGGAGATCTAACAGTGGGAGATGGTGGGTGATTAGATACCAAGATATGTATAATGATTCATAACAAGAATAGTAATTCTAGTTCTTATTTTTGTTTTTCAAAATGAATAGAACATCGCTGTTGATAATAATTTTGGTATGTGTTATTTGCTGCAGTGGAAAGAATCCTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCATGCGGACTCTACCTGGGACATGTCAAATATGATCTACCACCTCCAGAGCCCCACTGA

mRNA sequence

ATGACGGAAAACCAGAAGCATAGGCTAGAATACAGTTCCGACTCATCACCTCAAAGGCCGTTGAAAATTGGAAAGATCACGGACGAAGTTCTCGGCAGCGACACGGAGGAAGCAGAAGCCATGAACCGTAAACCTGGAATCCAACGCTATCTAGTTGCAGTCGAGTATATAGGAACTCGTTTTTCAGGGTCTCAGAAGCAGCCCAATTGCCGTACGGTGGTTGGCGTGCTGGAGGAAGCGTTTCAGAAATTCATCGGTCAATCAGTTCCAGTGTTTTGTTCTAGCAGAACAGATAATATTAAACCAGATGAGAAACTTAAATTGAAAAGTATTTTGGAGACCTATATCTCCCAAGGTTCCACGACTTTTATCTTGTTGATTCAGATTCTTCAGTGCTCTGGTAGTTTTCTTCCACTAGGTAATTCCGTACATGTTATGACTTTCATTCTTTTTTCAACCAAGGATGCTGGAGTCCATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGTTAACTCCACATGAACCGCAAGTCGTTCGTAGGGCTGTGAATCATTTCTTACAGAAACAGGAAGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTTTCATGCTAGATATAAAGCTCAAGAGCGTACCTACTTTTATCGGTTAGTTTCTGGTCCAGAAACTTTGTCAAGTTTTGAGAAGGATCGGGCATGGCACGTGCCCGAGACATTGAATATTGAGGCGATGCAGGGGGCATGCAAAGTGCTTGTTGGGCATCATGATTTTAGTTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCGCCAATCAGAACTCTGGATGAACTAGACGTTTGTGAGGTGGTTTCAACGCCTTATTTTCCAACAGAAATGGAGCGAAAACAAAGGCAAGGTAAAGAAGAAACCAGGAACGAAGTGCCACATTCTGAAACATGTGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTCTTGTGGTGACAGCACGAGCACGCTCTTTTCTCTATCATCAGGTGAGGCTGATGGTTGGAGTTCTTAAAGCGGTCGGCACCGGAGATCTAACAGTGGGAGATGTGGAAAGAATCCTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCATGCGGACTCTACCTGGGACATGTCAAATATGATCTACCACCTCCAGAGCCCCACTGA

Coding sequence (CDS)

ATGACGGAAAACCAGAAGCATAGGCTAGAATACAGTTCCGACTCATCACCTCAAAGGCCGTTGAAAATTGGAAAGATCACGGACGAAGTTCTCGGCAGCGACACGGAGGAAGCAGAAGCCATGAACCGTAAACCTGGAATCCAACGCTATCTAGTTGCAGTCGAGTATATAGGAACTCGTTTTTCAGGGTCTCAGAAGCAGCCCAATTGCCGTACGGTGGTTGGCGTGCTGGAGGAAGCGTTTCAGAAATTCATCGGTCAATCAGTTCCAGTGTTTTGTTCTAGCAGAACAGATAATATTAAACCAGATGAGAAACTTAAATTGAAAAGTATTTTGGAGACCTATATCTCCCAAGGTTCCACGACTTTTATCTTGTTGATTCAGATTCTTCAGTGCTCTGGTAGTTTTCTTCCACTAGGTAATTCCGTACATGTTATGACTTTCATTCTTTTTTCAACCAAGGATGCTGGAGTCCATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGTTAACTCCACATGAACCGCAAGTCGTTCGTAGGGCTGTGAATCATTTCTTACAGAAACAGGAAGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTTTCATGCTAGATATAAAGCTCAAGAGCGTACCTACTTTTATCGGTTAGTTTCTGGTCCAGAAACTTTGTCAAGTTTTGAGAAGGATCGGGCATGGCACGTGCCCGAGACATTGAATATTGAGGCGATGCAGGGGGCATGCAAAGTGCTTGTTGGGCATCATGATTTTAGTTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCGCCAATCAGAACTCTGGATGAACTAGACGTTTGTGAGGTGGTTTCAACGCCTTATTTTCCAACAGAAATGGAGCGAAAACAAAGGCAAGGTAAAGAAGAAACCAGGAACGAAGTGCCACATTCTGAAACATGTGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTCTTGTGGTGACAGCACGAGCACGCTCTTTTCTCTATCATCAGGTGAGGCTGATGGTTGGAGTTCTTAAAGCGGTCGGCACCGGAGATCTAACAGTGGGAGATGTGGAAAGAATCCTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCATGCGGACTCTACCTGGGACATGTCAAATATGATCTACCACCTCCAGAGCCCCACTGA

Protein sequence

MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH

Homology

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BLAST of Lag0002498 vs. NCBI nr
Match: XP_023524389.1 (uncharacterized protein LOC111788293 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622.1 bits (1603), Expect = 3.5e-174
Identity = 319/407 (78.38%), Postives = 330/407 (81.08%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKHRLE+SSDSSPQRPLKIGK T+E L  D EEAE+MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVGVLEEAF+KFIGQSV VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VVRRAVNHFLQK +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPETLSS
Sbjct: 181 LPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           F+KDR WHVPE LNI AMQ ACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEVVSTP
Sbjct: 241 FDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFP+ MERKQRQGKEE  NEV HSE+ EVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPSSMERKQRQGKEECENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 350

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP 408
           LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP 350

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BLAST of Lag0002498 vs. NCBI nr
Match: XP_022956590.1 (uncharacterized protein LOC111458281 [Cucurbita moschata])

HSP 1 Score: 621.3 bits (1601), Expect = 5.9e-174
Identity = 319/409 (78.00%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKHRLE+SSDSSPQRPLKIGK T+E L  D EEAE+MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLLGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVGVLEEAF+KFIGQSV VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VVRRAVNHFLQK +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPETLSS
Sbjct: 181 LPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           F+KDR WHVPE LNI AMQ ACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEVVSTP
Sbjct: 241 FDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFP+ MERKQRQGKEE  N V HSE+ EVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPSSMERKQRQGKEEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEP 410
           LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP P
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPP 352

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BLAST of Lag0002498 vs. NCBI nr
Match: XP_022998153.1 (uncharacterized protein LOC111492882 [Cucurbita maxima])

HSP 1 Score: 621.3 bits (1601), Expect = 5.9e-174
Identity = 318/409 (77.75%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKHRLE+SSDSSPQRPLKIGK T+E L  D EEAE+MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVGVLEEAF+KFIGQSV VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VVRRAVNHFLQK +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPETLSS
Sbjct: 181 LPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           F+KDR WHVPE LNI AMQ ACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEV+STP
Sbjct: 241 FDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVISTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFP+ MERKQRQGKEE  NEV HSE+ EVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPSSMERKQRQGKEEGENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEP 410
           LK VGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP P
Sbjct: 361 LKVVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPLP 352

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BLAST of Lag0002498 vs. NCBI nr
Match: XP_038877867.1 (tRNA pseudouridine synthase A isoform X2 [Benincasa hispida])

HSP 1 Score: 617.5 bits (1591), Expect = 8.5e-173
Identity = 321/410 (78.29%), Postives = 326/410 (79.51%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKH LE+S DSSPQRPLKIGK TDEVL    EEAE MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLEFSIDSSPQRPLKIGKTTDEVLNRHEEEAETMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVG LEEAFQKFIGQ V VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VV RAVNHFLQK EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPE LSS
Sbjct: 181 LPPHEPGVVHRAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           FEKDRAWHV ETLNI AMQ ACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP
Sbjct: 241 FEKDRAWHVSETLNIGAMQDACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFPT MERKQRQGKE   +EVPHSETCEVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPTSMERKQRQGKEGD-SEVPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 351

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH 411
           LKAVGTGDLTVGDVERILEAKNV+SASPMAPACGLYLGHV+YDL PP PH
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVNSASPMAPACGLYLGHVRYDL-PPAPH 351

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BLAST of Lag0002498 vs. NCBI nr
Match: XP_008445970.1 (PREDICTED: tRNA pseudouridine synthase A isoform X1 [Cucumis melo] >KAA0034150.1 tRNA pseudouridine synthase A isoform X1 [Cucumis melo var. makuwa] >TYK15769.1 tRNA pseudouridine synthase A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 617.5 bits (1591), Expect = 8.5e-173
Identity = 319/410 (77.80%), Postives = 324/410 (79.02%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGK TD+V   D EEAE MN KPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVG LEEAFQKFIGQ V VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VV +AVNHFLQK EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPE LSS
Sbjct: 181 LPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           FEKDRAWHVPETLNI AMQ ACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STP
Sbjct: 241 FEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFPT MERKQRQGKEE+ NE PHSETCEVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH 411
           LKAVGTGDLTVGDVERILEAKNVSSA PMAPACGLYLGHVKYDL PP PH
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSARPMAPACGLYLGHVKYDL-PPAPH 352

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BLAST of Lag0002498 vs. ExPASy Swiss-Prot
Match: B6IPI0 (tRNA pseudouridine synthase A OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=truA PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.9e-38
Identity = 120/356 (33.71%), Postives = 153/356 (42.98%), Query Frame = 0


Query: 47  IQRYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKL 106
           +QR+ + +EY G  F G Q+Q N  +V   LEEA  +F  ++V VFC+ RT         
Sbjct: 1   MQRWKLTLEYDGRPFVGWQRQDNGPSVQQALEEAIYRFTQETVTVFCAGRT--------- 60

Query: 107 KLKSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCH 166
                                                           DAGVHAL+ V  
Sbjct: 61  ------------------------------------------------DAGVHALAMVAS 120

Query: 167 VDVERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERT 226
           VD+ R +               V+ A+N  L+     V V+ V  V  DFHAR+    R 
Sbjct: 121 VDLAREA-----------TADKVQAALNFHLKPH--PVAVLRVEPVAPDFHARFSCLGRA 180

Query: 227 YFYRLVSGPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIR 286
           Y YR+++     ++ E  R WHV   L+ EAM  A + LVG HDFSSFRA+ CQA SP++
Sbjct: 181 YLYRILN-RRAPAALEAGRVWHVQGGLDAEAMHEAAQRLVGQHDFSSFRASLCQAKSPVK 240

Query: 287 TLDELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARA 346
           TL +L V  V                  EE R                       + ARA
Sbjct: 241 TLSDLSVARV-----------------GEEVR-----------------------IVARA 245

Query: 347 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
           RSFL+HQVR MVG LK VG G  T  DV R L A+N S+A P APA GLY     Y
Sbjct: 301 RSFLHHQVRNMVGTLKLVGEGRWTADDVSRALAARNRSAAGPTAPAAGLYFTEAWY 245

[Close]

BLAST of Lag0002498 vs. ExPASy Swiss-Prot
Match: A7IKI9 (tRNA pseudouridine synthase A OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=truA PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-37
Identity = 113/354 (31.92%), Postives = 155/354 (43.79%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKL 108
           RY + +EY GT ++G Q Q + +TV G L +AF++F G+ V V  + RT           
Sbjct: 3   RYKLTIEYDGTPYAGWQIQADQQTVQGALAQAFKRFCGEDVHVAGAGRT----------- 62

Query: 109 KSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVD 168
                                                         DAGVHA   V HVD
Sbjct: 63  ----------------------------------------------DAGVHATGQVAHVD 122

Query: 169 VERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYF 228
           + R                 VR A+    Q +   + V+    VP+ F AR+ A +R Y 
Sbjct: 123 LSR-----------HWRSDTVRDAMT--AQLRPHPIAVLSAEEVPDSFDARFSATKRHYL 182

Query: 229 YRLVSGPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTL 288
           YR+++    L + ++DRAW +P+ L+ +AM  A + L+G HDFS+FRAA CQA SP++TL
Sbjct: 183 YRIINRRPDL-ALDRDRAWRIPQKLDAQAMHEAAQRLLGKHDFSTFRAAECQAASPLKTL 242

Query: 289 DELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARS 348
           D+LDV                 R G E                        + V   ARS
Sbjct: 243 DQLDV----------------SRSGDE------------------------IRVITSARS 245

Query: 349 FLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
           FL+HQVR MVG L  VG G  +  D+E  L+A + +   PMAPA GLYL  V Y
Sbjct: 303 FLHHQVRSMVGSLMRVGEGRWSADDLEAALKAADRTRCGPMAPAAGLYLAAVSY 245

[Close]

BLAST of Lag0002498 vs. ExPASy Swiss-Prot
Match: A9ILJ7 (tRNA pseudouridine synthase A OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=truA PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-37
Identity = 107/358 (29.89%), Postives = 161/358 (44.97%), Query Frame = 0


Query: 47  IQRYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKL 106
           + R+ + +EY G+ ++G Q+Q    T+ G LE+A  +F GQ + +  + RT         
Sbjct: 1   MSRFKLTLEYDGSNYAGWQRQAKLHTIQGALEQAIFRFSGQQLTITTAGRT--------- 60

Query: 107 KLKSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCH 166
                                                           DAGVHA   V H
Sbjct: 61  ------------------------------------------------DAGVHATGQVAH 120

Query: 167 VDVERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERT 226
           VD     K  P        P  VR A+N  L++Q   +++++V +VP+DF AR+ A +R 
Sbjct: 121 VD---FIKNWP--------PHTVRDALNALLRQQSEAISILNVENVPDDFDARFSAIKRH 180

Query: 227 YFYRLVS--GPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSP 286
           Y +++++   P  L++    R W +P+ LN +AM  A + LVG HDF++FR+A CQA SP
Sbjct: 181 YLFKILNRRSPPALNA---KRVWWIPKPLNAQAMHEAAQKLVGQHDFTTFRSAHCQAKSP 240

Query: 287 IRTLDELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTA 346
           IRTL+ LD+                Q++G+E                        + + A
Sbjct: 241 IRTLERLDI----------------QKEGEE------------------------IFIYA 247

Query: 347 RARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
           +ARSFL+HQ+R   G L  VG G  T  D+E  L AK+      +AP  GLYL  V+Y
Sbjct: 301 KARSFLHHQIRSFAGSLMEVGIGRWTAQDLEAALHAKDRKRCGVVAPPSGLYLTKVEY 247

[Close]

BLAST of Lag0002498 vs. ExPASy Swiss-Prot
Match: Q6G547 (tRNA pseudouridine synthase A OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) OX=283166 GN=truA PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 108/356 (30.34%), Postives = 158/356 (44.38%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKL 108
           R+ + +EY G+ ++G Q+Q   RT+   LE+A   F GQ + +  + RT           
Sbjct: 3   RFKLTLEYDGSNYAGWQRQAELRTIQSALEQALFHFSGQQLTITTAGRT----------- 62

Query: 109 KSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVD 168
                                                         DAGVHA   V HVD
Sbjct: 63  ----------------------------------------------DAGVHATGQVAHVD 122

Query: 169 VERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYF 228
            E+                 VR A+N  LQKQ  ++ ++ V++VP+ F AR+ A +R Y 
Sbjct: 123 FEK-----------NWRTHTVRDALNAHLQKQGDNIAILHVQNVPDSFDARFSAIKRHYL 182

Query: 229 YRLVS--GPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIR 288
           +++++   P  L++    R W +P+ LN +AM  A + LVG HDF++FR+A CQA SPIR
Sbjct: 183 FKILNRRSPPALNT---KRVWWIPKPLNAQAMHEAAQKLVGKHDFTTFRSAHCQAKSPIR 242

Query: 289 TLDELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARA 348
           TL+ LDV                QR+G+E                        + + A+A
Sbjct: 243 TLERLDV----------------QREGEE------------------------IFLYAQA 247

Query: 349 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
           RSFL+HQ+R   G L  VG G  T  D+E  L AK+ +    +AP  GLYL  V+Y
Sbjct: 303 RSFLHHQIRSFAGSLMEVGIGRWTTQDLEAALHAKDRTRCGMVAPPSGLYLTKVEY 247

[Close]

BLAST of Lag0002498 vs. ExPASy Swiss-Prot
Match: A1UUB6 (tRNA pseudouridine synthase A OS=Bartonella bacilliformis (strain ATCC 35685 / NCTC 12138 / KC583) OX=360095 GN=truA PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-35
Identity = 109/356 (30.62%), Postives = 157/356 (44.10%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKL 108
           R+ + +EY G+ ++G Q+Q   RTV G +E+A   F GQ + +  + RT           
Sbjct: 3   RFKLTLEYDGSNYAGWQRQAELRTVQGAVEQAIFHFSGQQLTITTAGRT----------- 62

Query: 109 KSILETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVD 168
                                                         DAGVHA   V HVD
Sbjct: 63  ----------------------------------------------DAGVHATGQVAHVD 122

Query: 169 VERISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYF 228
            E     K   V T H       A+N  L++Q  ++ +++V ++P+ F AR  A +R Y 
Sbjct: 123 FE-----KDWHVNTIH------NALNAHLRQQGDNIAILNVENIPDSFDARLSAVKRHYL 182

Query: 229 YRLVS--GPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIR 288
           +++++   P  L++    R W +P  LN +AM  A + LVG HDF++FR+A CQA SPIR
Sbjct: 183 FKILNRRAPPALNA---KRVWWLPRPLNADAMHKAAQKLVGKHDFTTFRSAHCQAKSPIR 242

Query: 289 TLDELDVCEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARA 348
           TL+ LDV                QR+G+E                        + + ARA
Sbjct: 243 TLECLDV----------------QREGEE------------------------IFLYARA 247

Query: 349 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
           RSFL+HQ+R   G L  VG G  T  D+E  L AK+ +    +AP  GLYL  V Y
Sbjct: 303 RSFLHHQIRSFAGSLMEVGIGRWTAQDLEEALHAKDRARCGMVAPPSGLYLTQVDY 247

[Close]

BLAST of Lag0002498 vs. ExPASy TrEMBL
Match: A0A6J1KFZ8 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111492882 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.9e-174
Identity = 318/409 (77.75%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKHRLE+SSDSSPQRPLKIGK T+E L  D EEAE+MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVGVLEEAF+KFIGQSV VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VVRRAVNHFLQK +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPETLSS
Sbjct: 181 LPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           F+KDR WHVPE LNI AMQ ACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEV+STP
Sbjct: 241 FDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVISTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFP+ MERKQRQGKEE  NEV HSE+ EVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPSSMERKQRQGKEEGENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEP 410
           LK VGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP P
Sbjct: 361 LKVVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPLP 352

[Close]

BLAST of Lag0002498 vs. ExPASy TrEMBL
Match: A0A6J1GY72 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111458281 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.9e-174
Identity = 319/409 (78.00%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKHRLE+SSDSSPQRPLKIGK T+E L  D EEAE+MNR PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLLGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVGVLEEAF+KFIGQSV VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VVRRAVNHFLQK +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPETLSS
Sbjct: 181 LPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           F+KDR WHVPE LNI AMQ ACKVLVGHHDFSSFRAAGCQANSP+RTLDELDVCEVVSTP
Sbjct: 241 FDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFP+ MERKQRQGKEE  N V HSE+ EVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPSSMERKQRQGKEEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEP 410
           LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP P
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPP 352

[Close]

BLAST of Lag0002498 vs. ExPASy TrEMBL
Match: A0A5D3CZZ6 (tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002730 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 4.1e-173
Identity = 319/410 (77.80%), Postives = 324/410 (79.02%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGK TD+V   D EEAE MN KPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVG LEEAFQKFIGQ V VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VV +AVNHFLQK EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPE LSS
Sbjct: 181 LPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           FEKDRAWHVPETLNI AMQ ACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STP
Sbjct: 241 FEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFPT MERKQRQGKEE+ NE PHSETCEVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH 411
           LKAVGTGDLTVGDVERILEAKNVSSA PMAPACGLYLGHVKYDL PP PH
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSARPMAPACGLYLGHVKYDL-PPAPH 352

[Close]

BLAST of Lag0002498 vs. ExPASy TrEMBL
Match: A0A1S3BDG9 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 4.1e-173
Identity = 319/410 (77.80%), Postives = 324/410 (79.02%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGK TD+V   D EEAE MN KPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVG LEEAFQKFIGQ V VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VV +AVNHFLQK EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPE LSS
Sbjct: 181 LPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           FEKDRAWHVPETLNI AMQ ACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STP
Sbjct: 241 FEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFPT MERKQRQGKEE+ NE PHSETCEVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 352

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH 411
           LKAVGTGDLTVGDVERILEAKNVSSA PMAPACGLYLGHVKYDL PP PH
Sbjct: 361 LKAVGTGDLTVGDVERILEAKNVSSARPMAPACGLYLGHVKYDL-PPAPH 352

[Close]

BLAST of Lag0002498 vs. ExPASy TrEMBL
Match: A0A1S3BDY4 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 3.0e-171
Identity = 318/410 (77.56%), Postives = 323/410 (78.78%), Query Frame = 0


Query: 1   MTENQKHRLEYSSDSSPQRPLKIGKITDEVLGSDTEEAEAMNRKPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGK TD+V   D EEAE MN KPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGS 120
           FSGSQ+QPNCRTVVG LEEAFQKFIGQ V VFCSSRT                       
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRT----------------------- 120

Query: 121 TTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEV 180
                                             DAGVHALSNVCHVDVERISKRKPGEV
Sbjct: 121 ----------------------------------DAGVHALSNVCHVDVERISKRKPGEV 180

Query: 181 LTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSS 240
           L PHEP VV +AVNHFLQK EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPE LSS
Sbjct: 181 LPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSS 240

Query: 241 FEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDVCEVVSTP 300
           FEKDRAWHVPETLNI AMQ ACKVLVGHHDFSSFRAAGCQANSPIRTLDEL+VCEV STP
Sbjct: 241 FEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTP 300

Query: 301 YFPTEMERKQRQGKEETRNEVPHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGV 360
           YFPT MERKQRQGKEE+ NE PHSETCEVGFGIRRRHRC VVTARARSFLYHQVRLMVGV
Sbjct: 301 YFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGV 351

Query: 361 LKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPEPH 411
           LKAVGTGDLTVGD ERILEAKNVSSA PMAPACGLYLGHVKYDL PP PH
Sbjct: 361 LKAVGTGDLTVGD-ERILEAKNVSSARPMAPACGLYLGHVKYDL-PPAPH 351

[Close]

BLAST of Lag0002498 vs. TAIR 10
Match: AT1G09800.1 (Pseudouridine synthase family protein )

HSP 1 Score: 422.9 bits (1086), Expect = 2.9e-118
Identity = 237/431 (54.99%), Postives = 278/431 (64.50%), Query Frame = 0


Query: 1   MTENQKHRLE-YSSDSSPQRPLKIGKI-------TDEVLG-SDTEEAEAMNRKPGIQRYL 60
           M++N KH L+  +S+ S +R  K+ +I       ++E  G +D E    +N  P +QRYL
Sbjct: 1   MSDNLKHPLDCTASEESLERLSKVARIEGFSDEESEEQQGLADLESMNPVN--PRVQRYL 60

Query: 61  VAVEYIGTRFSGSQKQPNCRTVVGVLEEAFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSI 120
           VA+EYIGTRFSGSQ+Q   RTVVGVL+EAF KFIGQ V +FCSSRT              
Sbjct: 61  VAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRT-------------- 120

Query: 121 LETYISQGSTTFILLIQILQCSGSFLPLGNSVHVMTFILFSTKDAGVHALSNVCHVDVER 180
                                                      DAGVHALSNVCHVDVER
Sbjct: 121 -------------------------------------------DAGVHALSNVCHVDVER 180

Query: 181 ISKRKPGEVLTPHEPQVVRRAVNHFLQKQEGDVTVVDVRSVPNDFHARYKAQERTYFYRL 240
           ISKRKPGEVL PHEP VV+RAVNHFLQ+++GDV V+DVR VP+++HARYKAQERTYFYRL
Sbjct: 181 ISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRL 240

Query: 241 VSGPETLSSFEKDRAWHVPETLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDEL 300
           +SG + LS  EKDR WHVPE LN+  MQ AC+VLVG HDFSSFRAAGCQA SP+R+LDEL
Sbjct: 241 LSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDEL 300

Query: 301 DVCEVVSTPYFPTEMER---KQRQGKEETRNEVPHSETCEV--------------GFGIR 360
           ++ EV STPYFP+  ER       G     +  P SET  V               FG R
Sbjct: 301 NITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSETAGVTTNVGEVEGSTEGDSFGRR 360

Query: 361 RRHRCLVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACG 406
           RRHRC VVTAR+R FLYHQVRL+VG LK VGTG+LTV DVERILEAK VS+A PMAPA G
Sbjct: 361 RRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASG 372

[Close]

BLAST of Lag0002498 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 50.1 bits (118), Expect = 5.1e-06
Identity = 45/180 (25.00%), Postives = 68/180 (37.78%), Query Frame = 0


Query: 203 DVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPETLSSFEKDRAWHVPETLNIEAMQGAC 262
           D+ V+     P DFHAR+    R Y Y                 W   + LN+ AM  A 
Sbjct: 198 DIRVIGWSPAPIDFHARFSCYAREYKYFF---------------WR--QNLNLSAMDFAG 257

Query: 263 KVLVGHHDFSSFRAAGCQANSPIRTLDELDV-CEVVSTPYFPTEMERKQRQGKEETRNEV 322
           K  +G HDF +F    C+       +D  +V C      +F     +   +G +      
Sbjct: 258 KKFIGEHDFRNF----CK-------MDVANVHCYTRRVTFFEVSPCQNSHEGDQ------ 317

Query: 323 PHSETCEVGFGIRRRHRCLVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAK 382
                                T R  +FL+HQ+R MV VL  +G G  +V  ++ +L+ K
Sbjct: 318 -----------------LCTFTMRGSAFLWHQIRCMVAVLFMIGQGVESVDVIDTLLDTK 326

[Close]

BLAST of Lag0002498 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.3e-05
Identity = 94/412 (22.82%), Postives = 142/412 (34.47%), Query Frame = 0


Query: 26  ITDEVLGSDTEEAEAMNRKPGIQ------RYLVAVEYIGTRFSGSQKQPNCRTVVGVLEE 85
           IT+E+L     E E   RK G         + + + Y G  F G QKQP+  TV GV+E+
Sbjct: 67  ITEEMLLE--SEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEK 126

Query: 86  AFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGSTTFILLIQILQCSGSFLPL 145
           +   F+ +             +  + LK K                      C     PL
Sbjct: 127 SLGGFVDE-------------RKAQLLKKK----------------------CK----PL 186

Query: 146 GNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEVLTPHEPQVVRRAVNHFLQK 205
              V     ++    D GV AL+ VC     R             EP  +  A+N   + 
Sbjct: 187 EGRV-----LVAGRTDKGVSALNQVCSFYTWR----------KDIEPIAIEDAIN---KD 246

Query: 206 QEGDVTVVDVRSVPNDFHARYKAQERTYFY--------RLVSGPETLSSF------EKDR 265
             G + VV +  V   FH  + A+ R Y Y         L    E   +F      +K R
Sbjct: 247 ASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKKQR 306

Query: 266 AWHVPE------------TLNIEAMQGACKVLVGHHDFSSFRAAGCQANSPIRTLDELDV 325
              + E             L IE    A +V+    DFS          S +  L +   
Sbjct: 307 NGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSV---------SKVDQLLQHLQ 366

Query: 326 CEVVSTPYFPTEMERKQRQGKEETRNEVPHSETCEVGFGIR---RRHRCLVVTARARSFL 385
            +V+S   F  + +  + +G   T   + H+   E+           R + V   A  FL
Sbjct: 367 GKVLSYKMFARDTKAARNEG-PPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFL 409

Query: 386 YHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 403
              VR++V               + ++LEA    + +P AP+ GL L  V Y
Sbjct: 427 RKMVRVLVATSIREAAAGAEDDALLKLLEASCRRATAPPAPSEGLCLFDVGY 409

[Close]

BLAST of Lag0002498 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 3.6e-04
Identity = 52/210 (24.76%), Postives = 75/210 (35.71%), Query Frame = 0


Query: 26  ITDEVLGSDTEEAEAMNRKPGIQ------RYLVAVEYIGTRFSGSQKQPNCRTVVGVLEE 85
           IT+E+L     E E   RK G         + + + Y G  F G QKQP+  TV GV+E+
Sbjct: 67  ITEEMLLE--SEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEK 126

Query: 86  AFQKFIGQSVPVFCSSRTDNIKPDEKLKLKSILETYISQGSTTFILLIQILQCSGSFLPL 145
           +   F+ +             +  + LK K                      C     PL
Sbjct: 127 SLGGFVDE-------------RKAQLLKKK----------------------CK----PL 186

Query: 146 GNSVHVMTFILFSTKDAGVHALSNVCHVDVERISKRKPGEVLTPHEPQVVRRAVNHFLQK 205
              V     ++    D GV AL+ VC     R             EP  +  A+N   + 
Sbjct: 187 EGRV-----LVAGRTDKGVSALNQVCSFYTWR----------KDIEPIAIEDAIN---KD 217

Query: 206 QEGDVTVVDVRSVPNDFHARYKAQERTYFY 230
             G + VV +  V   FH  + A+ R Y Y
Sbjct: 247 ASGKLRVVSISKVSRSFHPNFSAKWRRYLY 217

The following BLAST results are available for this feature:

BLAST of Lag0002498 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524389.1	3.5e-174	78.38	uncharacterized protein LOC111788293 [Cucurbita pepo subsp. pepo]	[more]
XP_022956590.1	5.9e-174	78.00	uncharacterized protein LOC111458281 [Cucurbita moschata]	[more]
XP_022998153.1	5.9e-174	77.75	uncharacterized protein LOC111492882 [Cucurbita maxima]	[more]
XP_038877867.1	8.5e-173	78.29	tRNA pseudouridine synthase A isoform X2 [Benincasa hispida]	[more]
XP_008445970.1	8.5e-173	77.80	PREDICTED: tRNA pseudouridine synthase A isoform X1 [Cucumis melo] >KAA0034150.1...	[more]

BLAST of Lag0002498 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6IPI0	4.9e-38	33.71	tRNA pseudouridine synthase A OS=Rhodospirillum centenum (strain ATCC 51521 / SW...	[more]
A7IKI9	1.9e-37	31.92	tRNA pseudouridine synthase A OS=Xanthobacter autotrophicus (strain ATCC BAA-115...	[more]
A9ILJ7	2.4e-37	29.89	tRNA pseudouridine synthase A OS=Bartonella tribocorum (strain CIP 105476 / IBS ...	[more]
Q6G547	1.2e-36	30.34	tRNA pseudouridine synthase A OS=Bartonella henselae (strain ATCC 49882 / DSM 28...	[more]
A1UUB6	1.3e-35	30.62	tRNA pseudouridine synthase A OS=Bartonella bacilliformis (strain ATCC 35685 / N...	[more]

BLAST of Lag0002498 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KFZ8	2.9e-174	77.75	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111492882 PE=3 SV=...	[more]
A0A6J1GY72	2.9e-174	78.00	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111458281 PE=3 S...	[more]
A0A5D3CZZ6	4.1e-173	77.80	tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BDG9	4.1e-173	77.80	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1	[more]
A0A1S3BDY4	3.0e-171	77.56	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1	[more]

BLAST of Lag0002498 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09800.1	2.9e-118	54.99	Pseudouridine synthase family protein	[more]
AT1G34150.1	5.1e-06	25.00	Pseudouridine synthase family protein	[more]
AT5G35400.1	3.3e-05	22.82	Pseudouridine synthase family protein	[more]
AT5G35400.2	3.6e-04	24.76	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 223..401 e-value: 5.6E-40 score: 138.3
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 261..403 e-value: 3.3E-31 score: 108.0
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 45..100 e-value: 8.1E-12 score: 47.3 coord: 114..222 e-value: 2.2E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11142:SF0	TRNA PSEUDOURIDINE SYNTHASE-LIKE 1	coord: 145..403 coord: 33..98
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 145..403 coord: 33..98
IPR001406	Pseudouridine synthase I, TruA	HAMAP	MF_00171	TruA	coord: 48..402 score: 27.209576
IPR001406	Pseudouridine synthase I, TruA	CDD	cd02570	PseudoU_synth_EcTruA	coord: 54..402 e-value: 3.05825E-97 score: 288.603
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 155..403
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 47..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002498.1	Lag0002498.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity