Lag0001398 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCCACTCTTTCCGTCCGCCCCAACCGTCTTTCCGGCCGCGCATCTTTTCCGCCGCCGCCGCCTCACCGGCTCGGTTCGAACTTCATCGGGAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACAAATCTCTCGAACCCCGGCGATGACGGCCGCGCCGGTGCAGGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTCAAGGTTCTCGGAGTTCCCGATGGGGCCTCTTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCCGCTTGCGAGGACGATCAAGAAACAGTGGCGCAGGTAGAAGGAGATCCATTTTTCCACTTGTTTTGGGGAATTTTGGTAAATTAGGGATCTAACTATTGTATCCCCTTTGATTTGCGTACTGGCATTCGAAATTTCGGAGTCCGATTGATTTGGTAATTATTCATATGATCCTTGTGCTTTTTTTGGGTACAAATATGATCGCCATGGAGCTTGTGATTTCTCGAGCGAGAAGAACTCCTTTGTTTTGCTTTAGGATAGCTATTACCATTCAGCTATTTGAACCTGTTTATTGTCAATTAATTGACTCCGGCGACATGGTCCAATTTATGAAGCCTCGTACCTTTTCTTTTTAATCCCATTTTTGTTTCTTTTGTCCTCATTTTGATGCGCCTGAAATTTATAAGCACGAGGAATTTTTTATTAATAAACTGTAAATTGAATCAGAAAAAAGGGAAGTAGAAGGAATTGGCTAGGCTAAGATGAGGAGTTAAGGAAACGTGCATGACTCTGCAATTGGGTTCGAACGTTGTATTCATATACATGTTACTACAAGAGGAGGCAGTTATGGTTTTGGACAAAATATTGTGCATGGAATATTAGATTATTTGTTGTCCAGTTGTTATTTTAACGCACTAGACCTAAACTTTATCAAAGTTGTTTCATTTATAATGCTGCTGCAGATTGAGCACAGTGTTAGTATATTAGATATCCTCTGTTACGCAATCTTACAGTTATTGGAATTTTTTTTTTTCTTGAGTGTCTTTGATTTAGTTTTGTTCCATGAATGAAATTGAATATTTGTTTTTTGTTACAATGTCGATCATTTTGGCTGGTCTATGATTTACTCAAGTACCCAGAACCATCTCTCCCCATTGTTGGTCATTGCTGCTGTTGTGTGTTTTAGGTCGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACGAGCAGGAAAGGTTGTAAGTAGCAGGATCCTTTATGCTGATGTCAAACCGATCAATGAGCCACAAACTGGCTTAACACCCCAATGGCTGCAGACTACAATGAAGAACACACAATTGTCTATTGAAATGCCAACAATTAGTGATTTTGGCATACAAGCTGGCGTATATGGAGCTTTGATGGTTTTATCTTATGTAAATGGAGCAGCCACGTCTACTACGATGTCATATGATGGGGCTGATGTTTCCGGACTAATCTTGGCAAGTAGCTTTGGTGCTTCCTTGTATTTCATGACCAAACGGAACGTGAAGCTTGGTAAGGAGTTTTGCCAATGATTATTCTTTGTGCTTTTAGTTTGTACAAGATTGAAAGTAACTAAATCTTCACCAATTTGGATAACAGTTGAAGGAATTGCACTGTTTTTTGCTTGTGAATGTTCTTGAATTTTTGTCAAATAATTTTTTGGTTATTGTTGTTTTACTTGATTTCAGAAAAGGGGACTCTAATGGTTGAGAGGGGGAACGGGTTTTTCCCCCATATAAACTGGGCGTATTTCCTCTCGGTCAAATTGCATACTTTCTCGTATGCTACATTTGATATTTAAACTAGTTCATTCATTAGATTCAGGAATTTTGACCTAAATGTAGTTATTTTTATTCGTATGCACATATTATGCTGAGAAGTACAGATCTGACATCTTGGAGTCATATATAGACTGTTCAATTTTCATATGAGAATATTTTCAAATGATTCTTCTGTTCTTCTCTGCAGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCTGGTGCAGTAGTCGGTTCAGCAGTTGAGAATTGGTTGCATGTAGATATCGTTCCTTTTCTTGGCTTAAACTCTCCCGCCGCCGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTATCTGTTTACTTGGGATAG ATGGCAGCCACTCTTTCCGTCCGCCCCAACCGTCTTTCCGGCCGCGCATCTTTTCCGCCGCCGCCGCCTCACCGGCTCGGTTCGAACTTCATCGGGAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACAAATCTCTCGAACCCCGGCGATGACGGCCGCGCCGGTGCAGGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTCAAGGTTCTCGGAGTTCCCGATGGGGCCTCTTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCCGCTTGCGAGGACGATCAAGAAACAGTGGCGCAGGTCGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACGAGCAGGAAAGGTTGTAAGTAGCAGGATCCTTTATGCTGATGTCAAACCGATCAATGAGCCACAAACTGGCTTAACACCCCAATGGCTGCAGACTACAATGAAGAACACACAATTGTCTATTGAAATGCCAACAATTAGTGATTTTGGCATACAAGCTGGCGTATATGGAGCTTTGATGGTTTTATCTTATGTAAATGGAGCAGCCACGTCTACTACGATGTCATATGATGGGGCTGATGTTTCCGGACTAATCTTGGCAAGTAGCTTTGGTGCTTCCTTGTATTTCATGACCAAACGGAACGTGAAGCTTGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCTGGTGCAGTAGTCGGTTCAGCAGTTGAGAATTGGTTGCATGTAGATATCGTTCCTTTTCTTGGCTTAAACTCTCCCGCCGCCGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTATCTGTTTACTTGGGATAG ATGGCAGCCACTCTTTCCGTCCGCCCCAACCGTCTTTCCGGCCGCGCATCTTTTCCGCCGCCGCCGCCTCACCGGCTCGGTTCGAACTTCATCGGGAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACAAATCTCTCGAACCCCGGCGATGACGGCCGCGCCGGTGCAGGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTCAAGGTTCTCGGAGTTCCCGATGGGGCCTCTTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCCGCTTGCGAGGACGATCAAGAAACAGTGGCGCAGGTCGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACGAGCAGGAAAGGTTGTAAGTAGCAGGATCCTTTATGCTGATGTCAAACCGATCAATGAGCCACAAACTGGCTTAACACCCCAATGGCTGCAGACTACAATGAAGAACACACAATTGTCTATTGAAATGCCAACAATTAGTGATTTTGGCATACAAGCTGGCGTATATGGAGCTTTGATGGTTTTATCTTATGTAAATGGAGCAGCCACGTCTACTACGATGTCATATGATGGGGCTGATGTTTCCGGACTAATCTTGGCAAGTAGCTTTGGTGCTTCCTTGTATTTCATGACCAAACGGAACGTGAAGCTTGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCTGGTGCAGTAGTCGGTTCAGCAGTTGAGAATTGGTTGCATGTAGATATCGTTCCTTTTCTTGGCTTAAACTCTCCCGCCGCCGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTATCTGTTTACTTGGGATAG MAATLSVRPNRLSGRASFPPPPPHRLGSNFIGKLSPWKGVSISQISRTPAMTAAPVQAGSRADDSAPFEMSVENALKVLGVPDGASFDDILRARNSILAACEDDQETVAQVEAAYDMLLMRSLTQRRAGKVVSSRILYADVKPINEPQTGLTPQWLQTTMKNTQLSIEMPTISDFGIQAGVYGALMVLSYVNGAATSTTMSYDGADVSGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLHVDIVPFLGLNSPAAVISEFILFSQFLVSVYLG Homology
BLAST of Lag0001398 vs. NCBI nr
Match: XP_038887421.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-129 Identity = 251/288 (87.15%), Postives = 263/288 (91.32%), Query Frame = 0
BLAST of Lag0001398 vs. NCBI nr
Match: XP_022135964.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Momordica charantia]) HSP 1 Score: 460.7 bits (1184), Expect = 9.4e-126 Identity = 244/288 (84.72%), Postives = 259/288 (89.93%), Query Frame = 0
BLAST of Lag0001398 vs. NCBI nr
Match: XP_008447928.1 (PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 446.4 bits (1147), Expect = 1.8e-121 Identity = 241/287 (83.97%), Postives = 255/287 (88.85%), Query Frame = 0
BLAST of Lag0001398 vs. NCBI nr
Match: XP_016900466.1 (PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 [Cucumis melo]) HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-110 Identity = 227/287 (79.09%), Postives = 240/287 (83.62%), Query Frame = 0
BLAST of Lag0001398 vs. NCBI nr
Match: XP_010086829.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Morus notabilis] >EXB24027.1 hypothetical protein L484_006058 [Morus notabilis]) HSP 1 Score: 389.0 bits (998), Expect = 3.5e-104 Identity = 209/291 (71.82%), Postives = 235/291 (80.76%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy Swiss-Prot
Match: G5DBJ0 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CPP1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06 Identity = 63/264 (23.86%), Postives = 110/264 (41.67%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy Swiss-Prot
Match: Q9FN50 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPP1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 47/175 (26.86%), Postives = 83/175 (47.43%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy TrEMBL
Match: A0A6J1C2Y7 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007789 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.5e-126 Identity = 244/288 (84.72%), Postives = 259/288 (89.93%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy TrEMBL
Match: A0A1S3BIJ0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490266 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 8.8e-122 Identity = 241/287 (83.97%), Postives = 255/287 (88.85%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy TrEMBL
Match: A0A1S4DWV9 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490266 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 7.0e-111 Identity = 227/287 (79.09%), Postives = 240/287 (83.62%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy TrEMBL
Match: W9QWT4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006058 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104 Identity = 209/291 (71.82%), Postives = 235/291 (80.76%), Query Frame = 0
BLAST of Lag0001398 vs. ExPASy TrEMBL
Match: A0A6P4AAI0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107427380 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 2.3e-101 Identity = 203/296 (68.58%), Postives = 239/296 (80.74%), Query Frame = 0
BLAST of Lag0001398 vs. TAIR 10
Match: AT2G20920.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 311.2 bits (796), Expect = 8.5e-85 Identity = 179/290 (61.72%), Postives = 214/290 (73.79%), Query Frame = 0
BLAST of Lag0001398 vs. TAIR 10
Match: AT5G23040.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06 Identity = 47/175 (26.86%), Postives = 83/175 (47.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|