Lag0001243 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001243
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Rhomboid family protein
Location	chr4: 27627951 .. 27632862 (-)
RNA-Seq Expression	Lag0001243
Synteny	Lag0001243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAATTGCAAGGACTTTTGGCTGGGATGTCCGGGAATGTTCTATTGGTATTTATTAAGCTATAAACTTTGTGGAAGGTTGCCATTTTAGCCACCAGTTTGGATGTTTCCTTAGAATGCAACATGAGAAGTTTTAAACATAGATATTGTAATGCTTTGGAGGTGTTGAACATTATATAGTCGGTCAAGTATGTCTCCACGGGCTTTAATAACTTCGATTTTGTTTATCTGTACTTTTCTTGATTGGGGCTTTAAAGTTTTGAATAATTTTTTCCCCTAGTCTGGTACTTACAAAAGAAAAGGTATTTTGCTTTTTTACCCCTGGAGGATCTAGGTTTTTATGTACCAGTCCTCTTTCAAGTGGGACAGTGGGTGCTTCTCCCATTTAAATTTCATAATGCGGACTAAGTCCAAGTTTCCCCTGCCCCGAAATCTTGTTTGGATCATCATCAACTCCAAGTTTAGCTTGGACATGGTTTTATGAAAAAGAAATAGAGCTCTTGAAAGTTTATCTCGAAGAGTTGAACAGAAAAATGGTAATTGAATTCTCTCTTCAAAAAAAAGAAAAATGGTAATTGAATTCCTTTAATTATTATTATTATTATTTTATTTTTAAAGAAAAGTAGGATATTCTTGTGGAGTTGAAGATGTTAGATGACTTTGAAAACATTGCTCCCCTTTATGATTTGAGGAGTCCTAAAAATTCTCCTAAGTGCCTTCGCCAAGACATAATCTGCAAAGAAGAAACACTTTGGAGACAAAACACAAACTTAAAGTAGCTTTGTGAAGATGTTGAAAATACTAAGGTTTTATATAGTCTCAAACATGGAACTTGGGATGAATGGCTGCTAATGGAGGCGATGTTAGCTTATATGCTCATATACGCCACAGTCCCATTCTAGAATTAGGCCCATGGTACCTTTGGGACGATTGTCATTGACCCTGCAAATGAGTAATTATTGCCTGACAGCTGGGTTGGAGTTTAATAGAAGATGAGAAGTTTATGATTTGGTGAAATTTTATCATTCTTCTTGATGCTCCATTTCTAAATCCTTCTCTGACTATTCTTCCTTTGTAATTAACCCTAAGGGTTTTCCCTTTTTTTTTTTTTTTTGGTAAGCCCCCAATGGACAGTAGAGACATCTCATTTTCATTTTCATTTAAGGATCTTATTTTCACATATTTAATTCTTATATTTCTTTGCCTTGTATAACATTATGACATCACCATAATCTTAATTTTTGGAGAACATAACTTTCTTTTAACATAAGTCTTTCTATGATATAGAAGGATTTATGTGAATTATATTTGGATTAAAATGTCTCTACAAAGTTATTCAATGTGTATTACGTTGGTCAGGTTGTTTCTGTAATGATCTTGACACATTTGTTTTAGTGTCTTATATCCTTTTTGGTGAATCTTGGTTCTTGTTCTTCTTAACTCCAATTTTTAGATTGATTGAAGCATAGTACTACTTTGTGTATAATTGTCATACTCTATTTCTTTTCCAGCAGAAACTTGCTCCTCTAATTGATGTCTCTTCTAAAGTGAAGGATGCATGGTGTCCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTCAAAGTATCTAAGGATATTTTATCATCCACATATGCTGGTTGTTTGTATTTCTTTGGTGGTGGGGAAACTGGGAATAGCTTAAAAAATGAACAAATATCCCACTGGAAAGCATCCAATAGAGATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGCTTTTAATATTTTGTGAGTTTTACTGTTAGCCATTTTCTCTTTGATATAGTTCCTACGATTTTGTTTTCTGATGTATATCTTTTCTTTTCTTCTTAAAATTTCCTTCTTATCTTATCTGCTAAATGTGTGGTGTGTATTTTCTGCAGAGCTTATATGGCACAAGTTGCATCAGAAGGAAAGTTACTCATCTGGGGAGCTAAGGTGATACTTAGTTTCTACAGATATTATGTTTGGCGTATATATACTTTAAACTGTGTTTGTGGGATGTTACAGGATTGACTTATAATTTACAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTGACGTCTGCTTTTTTGCATGCAAATGTTGGGCACTTGATGGTATACGGTCCTAATATTTTGTGCCATAGGTTGCATTGTTTTCATCTTCTTTAATGATTGGAAATTAACAGTTGAAAGTTTTTGTTGCAGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGTACTCGGAGATTTCTTGCAGTGTACTTTGCCTCAGCAATTGCAAGTACAATTCGTAATCTCAATAAAATAGCCATGATTTTATTAAATACCTTTTGACTCGATTATTTCAAGAAAATTAGGTTCATCCTTGAGTTATTGGTTCTGCGAGGCACCTTCGGTTGGTGCGTCAGGAGCAATCTTTGGATTGGTATGACTCTTTGTTTGCATTTGCATACTCGATTTGTGCCAACTCTATTGATGCATGACAAAGATAAAAATAAAAAACGAAGACAAGAAAAGGAAAGCAGCTATGGATTTTCATCTCATACTGGGGCAATAAAATTTTAGCCAGGAAGTAGGTATCAGGCTGTCGGGAGTTTTTCTGTTTTTTGTCCATCTGGTTCCTCATTGAACCTTCTTCTGTAAATTTGACACCCGCTACTTCTCGGAAGATTTATTGGAACTTGAGAAACTGCAAATCCTAGCTCCTGCTTTGAAGACTTCATCTTGGTTCATTGCATATTTTAGCTCTAGAACCAACTCTGAGCTGTGGTCTTGAACCTCCCCTGCACATAGAATTTTAAGCCTGAGGTAAGAATCTAGCGTGACTTACCAGAGAGTAGTGATAGTCGTTGATAAGTGCTGTGACAACTTAAGGGAAATTTGAGGGTCCCTTATCTCTCCTTACAATTTGACTATGGTTTCAAGACCAGAAAGAAGCATGCCTCAGTCCCTATGTCTACTGATATTTATAGTTATACCCACCCACCCCTTCATATTCTTACTTAATGACTAAGGACTATCTTTCCACGATTCCCCATTCTCTATTCATTAATACAACAATTTCCCATCTCCAGATTCCCACTCTCCTTATTACCTAGCTCAGGATTTCCTCCCTTCTTCTTCCTTGTGTAAAATTTCATGGTTGGGGGTCTATCAAATAGTAGGTGCATTAGTTGATCAAGCCACGAGTCTTGTCATAAGAAGGCTACATGTTGCTGACTTGGGACAATAAAAAGCCATACTTGTTACATTTAAGCTATTTTGATGAATGGTTGGCTTTCTTTGTTCCCAAGTATTTTAATTTTTAGTTTTCTGGTTCAGGTTGGATCCTTTGCTGTGTTTGTTGCGAGACATAGAAAACTGGTCGGTAGGGGCAAAGAAGATCTACAGCACATTGCTCAGATAGTAATCTTAAATATGGTATGTTTTCCAATTTCCTTTTCTTTATTAAAATCTTTTATAGCTTTCAAATTATTATATTATGGTAAGAAGTGGAAATAAATTATCACATGAGCATTCAGAGTTCTGATCAGTGTGCCTTATTTAGTAGTTGACTTTCAACCAGGGAGATAGGTTGGCACCCGCTTACTAGCACCTAGAACTGCATCGATAATTACTATTTATAATGTTTAATCTGTTAATTGGCATTTAACCTTTGGTGTCTGTTTTTAGGAGAATAATATCCATGATCATTTGGCTTGCAGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATGTAAGTTTGAGGGTAGACAATATTTATTTATTTTTTTCTCCCCTTGAAGATTACTCAATTTCAGTTCGTGATGCGATTATACTATTATGGTTTGTGATTTAATGAAAAGTATTTTTTGTTTTTAATTGGAATTAGAAAATGTTTGGTTGTCATAAAGTCTGCTTGATATTCCTGAATCATTGGTAAAATGCTTCAGCATCTAGTGCAAAACTTAAGTCTGGAAATGTACAATAATTGGAGGGTGACAAGCTTTAGACCTCAATCTATTTTATTCCTTCGTTTGGCTTTTCAATCATACATGGATTTAGGAATTGTCTTTATTTATTTTTTAAATTTTATTGAGTGGGATTATTAGTAATGGCCAAGGGATGCCAGTGTTTATTTTTTGTATGTTTGTTTCTCTTTTGTTTCTTTTTTATTTTTTGAAGGCATGCTGTTAAAGTGTACTTCACTCTCTTTGGCAGATTTTGCAGGCCTTCTCAAGGTTTTCATTCTTCTTATGAAACTTTAGTTTTATATACCAACAAAATCTAAAGATTAGTTTATAGTTATGATGAAAGATATTTGTTCAAGTTTGCGTGAAGTTGAAAATTGGTAGTCTTTAACCAAACGGATGGAAGGATACAATTGGGGTGTCGAGAGAGTGTGTATGATGTTTGAAGATCAAATTTTGGCCAAATCGACAGTGAACCAACAAGTCGATTTACAAAAATTTAAAGCCACTCGACAAAAATCAACTAAACCAACAATCTTTCAAACTCACTAGCAATTCTGTTGGTTTTTCAATTGTTTGGTTTGAAGTTGCAACCGCTTGCTAAGAGAAAACATTGTAATCCTGTGCTAGAATGTTCGAAGGACATAATCTATATGGCTTATGGGTGGAGAATCTAATGATATAGATGAACATGGGAAAGAATCTACATGATTTTGAAGCATCAAGAAATTGACTAAAAGAGAGGGTAGGATAGTTGTATGGATAGATCCTATACGCCACTAGGGCATGACAGCTCATAGTCGAGTCATCTCCCCAGATGATGTTATGTGCCTTGTGGTGTTAGCTTGACATGGCTCGAATCAAACATCCATCAAAGCATGCTATTGTTCAACCATGTCTAGCTTAG

mRNA sequence

ATGGTGCAATTGCAAGGACTTTTGGCTGGGATGTCCGGGAATGTTCTATTGCAGAAACTTGCTCCTCTAATTGATGTCTCTTCTAAAGTGAAGGATGCATGGTGTCCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTCAAAGTATCTAAGGATATTTTATCATCCACATATGCTGGTTGTTTGTATTTCTTTGGTGGTGGGGAAACTGGGAATAGCTTAAAAAATGAACAAATATCCCACTGGAAAGCATCCAATAGAGATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGCTTTTAATATTTTAGCTTATATGGCACAAGTTGCATCAGAAGGAAAGTTACTCATCTGGGGAGCTAAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTGACGTCTGCTTTTTTGCATGCAAATGTTGGGCACTTGATGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGTACTCGGAGATTTCTTGCAGTGTACTTTGCCTCAGCAATTGCAAGTTCATCCTTGAGTTATTGGTTCTGCGAGGCACCTTCGGTTGGTGCGTCAGGAGCAATCTTTGGATTGGTTGGATCCTTTGCTGTGTTTGTTGCGAGACATAGAAAACTGGTCGGTAGGGGCAAAGAAGATCTACAGCACATTGCTCAGATAGTAATCTTAAATATGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATCTTGACATGGCTCGAATCAAACATCCATCAAAGCATGCTATTGTTCAACCATGTCTAGCTTAG

Coding sequence (CDS)

ATGGTGCAATTGCAAGGACTTTTGGCTGGGATGTCCGGGAATGTTCTATTGCAGAAACTTGCTCCTCTAATTGATGTCTCTTCTAAAGTGAAGGATGCATGGTGTCCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTCAAAGTATCTAAGGATATTTTATCATCCACATATGCTGGTTGTTTGTATTTCTTTGGTGGTGGGGAAACTGGGAATAGCTTAAAAAATGAACAAATATCCCACTGGAAAGCATCCAATAGAGATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGCTTTTAATATTTTAGCTTATATGGCACAAGTTGCATCAGAAGGAAAGTTACTCATCTGGGGAGCTAAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTGACGTCTGCTTTTTTGCATGCAAATGTTGGGCACTTGATGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGTACTCGGAGATTTCTTGCAGTGTACTTTGCCTCAGCAATTGCAAGTTCATCCTTGAGTTATTGGTTCTGCGAGGCACCTTCGGTTGGTGCGTCAGGAGCAATCTTTGGATTGGTTGGATCCTTTGCTGTGTTTGTTGCGAGACATAGAAAACTGGTCGGTAGGGGCAAAGAAGATCTACAGCACATTGCTCAGATAGTAATCTTAAATATGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATCTTGACATGGCTCGAATCAAACATCCATCAAAGCATGCTATTGTTCAACCATGTCTAGCTTAG

Protein sequence

MVQLQGLLAGMSGNVLLQKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNEQISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHLDMARIKHPSKHAIVQPCLA

Homology

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BLAST of Lag0001243 vs. NCBI nr
Match: XP_022967604.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 429.1 bits (1102), Expect = 2.8e-116
Identity = 204/236 (86.44%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +KLAPL++VSSK+K AWC R LHFPGLNFL+VSKDILSST+A CLYFFGGG TG+SLKNE
Sbjct: 57  KKLAPLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNE 116

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
             SHWK SNR+PQNDRRWTNILL  NILA++AQVASEGKLL+WG+KIN LIDQGQLWRLV
Sbjct: 117 GTSHWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLV 176

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 177 TSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVG 236

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFA FV RHRKLVGRG EDLQHIA I+ILNMAIGIMSRGIDNWGHL
Sbjct: 237 ASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL 292

[Close]

BLAST of Lag0001243 vs. NCBI nr
Match: XP_038888167.1 (RHOMBOID-like protein 10, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 3.7e-116
Identity = 207/236 (87.71%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           QKLAP+I+ SSKVK+AWC  ALHFPGLNFL+V   ILSST+A CLYFFGGGETG+SLKNE
Sbjct: 58  QKLAPVIEFSSKVKNAWCSSALHFPGLNFLEV---ILSSTHAACLYFFGGGETGSSLKNE 117

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
           +ISHWK SNR+PQND+RWTNILLA NILAY+AQVASEGKLL+WGAKINGLIDQGQLWRLV
Sbjct: 118 RISHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLV 177

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNS+GPAVEK+SGT RFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 178 TSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVG 237

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFAVFVARHRKLVGRGKEDL+HIAQI+ILNMAIGIMSRGIDNWGHL
Sbjct: 238 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGHL 290

[Close]

BLAST of Lag0001243 vs. NCBI nr
Match: XP_023511751.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.3 bits (1100), Expect = 4.9e-116
Identity = 204/236 (86.44%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +KLAPLI+V SK+K AWC RALHFPGLNFL+VSKDILSST+A CLYFFGGG+TG+SLKNE
Sbjct: 57  KKLAPLIEVPSKLKSAWCSRALHFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNE 116

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
             SHWK SNR+PQNDRRWTNILL  NILA++AQVASEGKLL+WG+KIN LID+GQLWRLV
Sbjct: 117 GTSHWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDRGQLWRLV 176

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 177 TSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVG 236

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFA FV RHRKLVGRG EDLQHIA I+ILNMAIGIMSRGIDNWGHL
Sbjct: 237 ASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL 292

[Close]

BLAST of Lag0001243 vs. NCBI nr
Match: XP_038888170.1 (RHOMBOID-like protein 10, chloroplastic isoform X4 [Benincasa hispida])

HSP 1 Score: 427.6 bits (1098), Expect = 8.3e-116
Identity = 206/236 (87.29%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           QKLAP+I+ SSKVK+AWC  ALHFPGLNFL+V   ILSST+A CLYFFGGGETG+SLKNE
Sbjct: 58  QKLAPVIEFSSKVKNAWCSSALHFPGLNFLEV---ILSSTHAACLYFFGGGETGSSLKNE 117

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
           +ISHWK SNR+PQND+RWTNILLA NILAY+AQVASEGKLL+WGAKINGLIDQGQLWRLV
Sbjct: 118 RISHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLV 177

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNS+GPAVEK+SGT RFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 178 TSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVG 237

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFAVFVARHRKLVGRGKEDL+HIAQI+ILNMAIGIMSRGIDNWGH+
Sbjct: 238 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGHV 290

[Close]

BLAST of Lag0001243 vs. NCBI nr
Match: XP_038888168.1 (RHOMBOID-like protein 10, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115
Identity = 206/236 (87.29%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +KLAP+I+ SSKVK+AWC  ALHFPGLNFL+V   ILSST+A CLYFFGGGETG+SLKNE
Sbjct: 57  KKLAPVIEFSSKVKNAWCSSALHFPGLNFLEV---ILSSTHAACLYFFGGGETGSSLKNE 116

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
           +ISHWK SNR+PQND+RWTNILLA NILAY+AQVASEGKLL+WGAKINGLIDQGQLWRLV
Sbjct: 117 RISHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLV 176

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNS+GPAVEK+SGT RFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 177 TSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVG 236

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFAVFVARHRKLVGRGKEDL+HIAQI+ILNMAIGIMSRGIDNWGHL
Sbjct: 237 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGHL 289

[Close]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-67
Identity = 136/246 (55.28%), Postives = 173/246 (70.33%), Query Frame = 0


Query: 17  LQKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLK- 76
           L+KL    D  +++K A   R   F G NFLK   DI  S  +  + FF GGE+  + + 
Sbjct: 50  LKKLQHFSD-DARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRG 109

Query: 77  -NEQISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLW 136
             E  S+ + S R+  N RRWTN+LLA N++ Y+AQ+AS+GK+L WGAKIN LI++GQLW
Sbjct: 110 GEEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLW 169

Query: 137 RLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA-------SSSLS 196
           RL T++ LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+A        S++S
Sbjct: 170 RLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMS 229

Query: 197 YWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGI 254
           YWF +APSVGASGAIFGLVGS AVFV RH+++V  G EDL  IAQI+ LNMA+G+MSR I
Sbjct: 230 YWFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMSRRI 289

[Close]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 95  WTNILLAFNILAYMAQVASEGK-----LLIWGAKINGLIDQGQLWRLVTSAFLHANVGHL 154
           +T + +A  IL +     + G      L+ +GAK N LI QG+ WRL+T   LH  + HL
Sbjct: 179 FTYLFIALQILMFFLLEINGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHIGIAHL 238

Query: 155 MVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVGASGAIFGLVGSF 214
             N  +L S+G AVE++ G+ RFL +Y A+ I  S  S+ F   PS GASGAIFG +G+ 
Sbjct: 239 AFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCLGAL 298

Query: 215 AVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
                 +RK+  R      +I  I+I+N+  G     IDN GH+
Sbjct: 299 LYVALSNRKMFLRTIG--TNIIVIIIINLGFGFAVSNIDNSGHI 340

[Close]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.0e-13
Identity = 44/138 (31.88%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 118 LIWGAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYF 177
           L++GAKIN LI  G+ WRLVT  FLH+ + H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 178 ASAIASSSLSYWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGK-EDLQHIAQIVIL 237
              ++ + +S+     P+VG +G  F L+G++ V   ++++++   + EDL   A I++ 
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKA-IIMT 335

Query: 238 NMAIGIMSRG-IDNWGHL 254
              + +   G ID+W +L
Sbjct: 336 GFGLILSHFGPIDDWTNL 352

[Close]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot
Match: Q695U0 (Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-12
Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 117 LLIWGAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVY 176
           L+ +GA    LI QGQ+WRL+   FLHAN  H+  N +    +G  +E+  G  +F  +Y
Sbjct: 93  LVHFGANYPPLIKQGQVWRLLLPVFLHANFFHVFFNVFFQLRMGFTIERRYGLLKFTGLY 152

Query: 177 FASAIASSSLS--YWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIV 236
           FASAI  + LS   +FC +  VGAS A FGL+G     +A     +      L ++   V
Sbjct: 153 FASAIYGNLLSATAFFCNSLKVGASTAGFGLIGIQICEMALTWHRMRHRDRMLTNMVSFV 212

Query: 237 ILNMAIGIMSRG--IDNWGHL 254
           +L + +     G  ID  GHL
Sbjct: 213 LLMVLLMFTLNGGSIDQMGHL 233

[Close]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot
Match: Q9SSR0 (RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-12
Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 121 GAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASA 180
           GA    L+++G+ WRL++  +LH    HLM N  SL  IG  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 181 IASSSLSYWFC------EAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIV 240
           +  S +S   C      E  SVGASGA+FGL+G+    +  +  +       L  +  I+
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILII 213

Query: 241 ILNMAIGIMSRGIDNWGH 253
           +LN+++G + R +DN  H
Sbjct: 214 VLNLSVGFLPR-VDNSAH 227

[Close]

BLAST of Lag0001243 vs. ExPASy TrEMBL
Match: A0A6J1HX69 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467054 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.4e-116
Identity = 204/236 (86.44%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +KLAPL++VSSK+K AWC R LHFPGLNFL+VSKDILSST+A CLYFFGGG TG+SLKNE
Sbjct: 57  KKLAPLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNE 116

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
             SHWK SNR+PQNDRRWTNILL  NILA++AQVASEGKLL+WG+KIN LIDQGQLWRLV
Sbjct: 117 GTSHWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLV 176

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 177 TSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVG 236

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFA FV RHRKLVGRG EDLQHIA I+ILNMAIGIMSRGIDNWGHL
Sbjct: 237 ASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL 292

[Close]

BLAST of Lag0001243 vs. ExPASy TrEMBL
Match: A0A6J1HJ61 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464041 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115
Identity = 203/236 (86.02%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +KLAPLI+VSSK+K AWC RAL FPGLNFL+VSKDILSST+A CLYFFGGG+TG+SLKNE
Sbjct: 57  KKLAPLIEVSSKLKSAWCSRALRFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNE 116

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
             SHWK SNR+PQNDRRWT ILL  NILA++AQVASEGKLL+WG+KIN LIDQGQLWRLV
Sbjct: 117 ATSHWKTSNRNPQNDRRWTTILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLV 176

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC+APSVG
Sbjct: 177 TSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVG 236

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFA FV RHRKLVGRG EDLQHIA I+ILNMAIG+MSRGIDNWGHL
Sbjct: 237 ASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGMMSRGIDNWGHL 292

[Close]

BLAST of Lag0001243 vs. ExPASy TrEMBL
Match: A0A6J1DL86 (RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022158 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.4e-114
Identity = 198/236 (83.90%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           +K APL D+SSKVKDAWCPRALHFPGLNFL+VSKDI+SS Y+ CL+ FGGG+TGNSL+NE
Sbjct: 55  KKFAPLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLRNE 114

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
           + S WK SNR+P N++RWTNILLA NIL Y+AQVAS+GKLL+WGAKINGLIDQGQLWRLV
Sbjct: 115 RKSDWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLV 174

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC APSVG
Sbjct: 175 TSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVG 234

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVGSFAVFV RHRKLVGRGKEDL+HIA I++LNMAIG+MS GIDNWGH+
Sbjct: 235 ASGAIFGLVGSFAVFVVRHRKLVGRGKEDLRHIAHIILLNMAIGMMSTGIDNWGHV 290

[Close]

BLAST of Lag0001243 vs. ExPASy TrEMBL
Match: A0A2I4FV26 (RHOMBOID-like protein 10, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109002280 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.2e-89
Identity = 159/236 (67.37%), Postives = 198/236 (83.90%), Query Frame = 0


Query: 18  QKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLKNE 77
           QKL+  +D   ++KD W  + L F G+NFL++SKD ++STY+ CL FF GGE  N  +N+
Sbjct: 60  QKLS-CLDHVPRLKDVWHEKTLQFRGINFLQLSKDAVTSTYSTCLSFFDGGEKRNGFRND 119

Query: 78  QISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLWRLV 137
            + H K S+++  + RRWTNILLA N+L ++AQ A++GKLL+WGAKIN LID GQLWRL 
Sbjct: 120 GVPHSKISSKNSFDGRRWTNILLAANVLVFIAQTATQGKLLLWGAKINSLIDAGQLWRLA 179

Query: 138 TSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAPSVG 197
           TS+FLHAN+GHLMVNCYSLNSIGP+ EKISG RRFLAVYFASAIASS++SYWFC+AP+VG
Sbjct: 180 TSSFLHANIGHLMVNCYSLNSIGPSAEKISGPRRFLAVYFASAIASSAMSYWFCKAPAVG 239

Query: 198 ASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           ASGAIFGLVG+ AVFV RHR+LVG GKEDLQHIA++V+LNM IG++S+GIDNWGHL
Sbjct: 240 ASGAIFGLVGTVAVFVMRHRQLVGGGKEDLQHIARVVVLNMTIGLLSKGIDNWGHL 294

[Close]

BLAST of Lag0001243 vs. ExPASy TrEMBL
Match: A0A7N2RCU7 (Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.9e-88
Identity = 157/248 (63.31%), Postives = 198/248 (79.84%), Query Frame = 0


Query: 6   GLLAGMSGNVLLQKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFF 65
           G L   S +   +K++ L  V  ++KD WC + L F   NFL++SKD L++TY+ C  FF
Sbjct: 50  GFLFHSSSSCFFKKVSRLGHV-PRLKDVWCEKDLQFKEFNFLQLSKDTLTATYSTCSSFF 109

Query: 66  GGGETGNSLKNEQISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKIN 125
            GGET     N++ SH K S+R+  N RRWTNILLA N+L ++AQ A++G+L++WGAKIN
Sbjct: 110 NGGETRKDFGNDRASHSKISSRNSFNGRRWTNILLAVNVLIFIAQTATQGQLILWGAKIN 169

Query: 126 GLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS 185
            LID+GQ WRLVTS+FLHAN+GHLMVNCYSLNS+GP+ E ISG RRFLAVYFASAI+SS 
Sbjct: 170 SLIDKGQFWRLVTSSFLHANIGHLMVNCYSLNSLGPSAENISGPRRFLAVYFASAISSSV 229

Query: 186 LSYWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSR 245
           +SYWFC+AP+VGASGAIFGL+G+ AVF  RHR+LVGRGKEDLQHIAQ+++LNM IG+ S+
Sbjct: 230 MSYWFCKAPAVGASGAIFGLIGAVAVFATRHRQLVGRGKEDLQHIAQVIVLNMVIGLFSK 289

Query: 246 GIDNWGHL 254
           GIDNWGHL
Sbjct: 290 GIDNWGHL 296

[Close]

BLAST of Lag0001243 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-71
Identity = 137/239 (57.32%), Postives = 174/239 (72.80%), Query Frame = 0


Query: 17  LQKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLK- 76
           L+KL    D  +++K A   R   F G NFLK   DI  S  +  + FF GGE+  + + 
Sbjct: 50  LKKLQHFSD-DARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRG 109

Query: 77  -NEQISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLW 136
             E  S+ + S R+  N RRWTN+LLA N++ Y+AQ+AS+GK+L WGAKIN LI++GQLW
Sbjct: 110 GEEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLW 169

Query: 137 RLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSLSYWFCEAP 196
           RL T++ LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+ASS++SYWF +AP
Sbjct: 170 RLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVASSAMSYWFNKAP 229

Query: 197 SVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGIDNWGHL 254
           SVGASGAIFGLVGS AVFV RH+++V  G EDL  IAQI+ LNMA+G+MSR IDNWGH+
Sbjct: 230 SVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMSRRIDNWGHI 287

[Close]

BLAST of Lag0001243 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 258.1 bits (658), Expect = 8.1e-69
Identity = 136/246 (55.28%), Postives = 173/246 (70.33%), Query Frame = 0


Query: 17  LQKLAPLIDVSSKVKDAWCPRALHFPGLNFLKVSKDILSSTYAGCLYFFGGGETGNSLK- 76
           L+KL    D  +++K A   R   F G NFLK   DI  S  +  + FF GGE+  + + 
Sbjct: 50  LKKLQHFSD-DARMKFARYQRVFVFNGANFLKSRVDIRLSQSSPFVCFFNGGESRLNPRG 109

Query: 77  -NEQISHWKASNRDPQNDRRWTNILLAFNILAYMAQVASEGKLLIWGAKINGLIDQGQLW 136
             E  S+ + S R+  N RRWTN+LLA N++ Y+AQ+AS+GK+L WGAKIN LI++GQLW
Sbjct: 110 GEEGSSNPETSKRNTVNGRRWTNVLLAINVIMYIAQIASDGKVLTWGAKINSLIERGQLW 169

Query: 137 RLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIA-------SSSLS 196
           RL T++ LHAN  HLM+NCYSLNSIGP  E + G +RFLAVY  SA+A        S++S
Sbjct: 170 RLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMS 229

Query: 197 YWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIVILNMAIGIMSRGI 254
           YWF +APSVGASGAIFGLVGS AVFV RH+++V  G EDL  IAQI+ LNMA+G+MSR I
Sbjct: 230 YWFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMSRRI 289

[Close]

BLAST of Lag0001243 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-14
Identity = 44/138 (31.88%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 118 LIWGAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYF 177
           L++GAKIN LI  G+ WRLVT  FLH+ + H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 178 ASAIASSSLSYWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGK-EDLQHIAQIVIL 237
              ++ + +S+     P+VG +G  F L+G++ V   ++++++   + EDL   A I++ 
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKA-IIMT 335

Query: 238 NMAIGIMSRG-IDNWGHL 254
              + +   G ID+W +L
Sbjct: 336 GFGLILSHFGPIDDWTNL 352

[Close]

BLAST of Lag0001243 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-14
Identity = 44/138 (31.88%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 118 LIWGAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYF 177
           L++GAKIN LI  G+ WRLVT  FLH+ + H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 178 ASAIASSSLSYWFCEAPSVGASGAIFGLVGSFAVFVARHRKLVGRGK-EDLQHIAQIVIL 237
              ++ + +S+     P+VG +G  F L+G++ V   ++++++   + EDL   A I++ 
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKA-IIMT 335

Query: 238 NMAIGIMSRG-IDNWGHL 254
              + +   G ID+W +L
Sbjct: 336 GFGLILSHFGPIDDWTNL 352

[Close]

BLAST of Lag0001243 vs. TAIR 10
Match: AT1G52580.1 (RHOMBOID-like protein 5 )

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-13
Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 121 GAKINGLIDQGQLWRLVTSAFLHANVGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASA 180
           GA    L+++G+ WRL++  +LH    HLM N  SL  IG  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 181 IASSSLSYWFC------EAPSVGASGAIFGLVGSFAVFVARHRKLVGRGKEDLQHIAQIV 240
           +  S +S   C      E  SVGASGA+FGL+G+    +  +  +       L  +  I+
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILII 213

Query: 241 ILNMAIGIMSRGIDNWGH 253
           +LN+++G + R +DN  H
Sbjct: 214 VLNLSVGFLPR-VDNSAH 227

The following BLAST results are available for this feature:

BLAST of Lag0001243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967604.1	2.8e-116	86.44	RHOMBOID-like protein 10, chloroplastic [Cucurbita maxima]	[more]
XP_038888167.1	3.7e-116	87.71	RHOMBOID-like protein 10, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_023511751.1	4.9e-116	86.44	RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038888170.1	8.3e-116	87.29	RHOMBOID-like protein 10, chloroplastic isoform X4 [Benincasa hispida]	[more]
XP_038888168.1	1.1e-115	87.29	RHOMBOID-like protein 10, chloroplastic isoform X2 [Benincasa hispida]	[more]

BLAST of Lag0001243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4ICF4	1.1e-67	55.28	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
P54493	3.3e-22	38.41	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
Q9FFX0	8.0e-13	31.88	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
Q695U0	4.0e-12	36.17	Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1	[more]
Q9SSR0	5.2e-12	34.06	RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1	[more]

BLAST of Lag0001243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX69	1.4e-116	86.44	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1HJ61	1.5e-115	86.02	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DL86	6.4e-114	83.90	RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A2I4FV26	4.2e-89	67.37	RHOMBOID-like protein 10, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=...	[more]
A0A7N2RCU7	7.9e-88	63.31	Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Lag0001243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25290.2	2.3e-71	57.32	RHOMBOID-like protein 10	[more]
AT1G25290.1	8.1e-69	55.28	RHOMBOID-like protein 10	[more]
AT5G38510.1	5.7e-14	31.88	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	5.7e-14	31.88	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G52580.1	3.7e-13	34.06	RHOMBOID-like protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 129..253 e-value: 4.7E-37 score: 127.3
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 89..253 e-value: 1.4E-38 score: 134.4
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 93..253
None	No IPR available	PANTHER	PTHR43731:SF14	PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIAL	coord: 60..253
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 60..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001243.1	Lag0001243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0004252	serine-type endopeptidase activity