Lag0000997 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCAATAACATGAGTAGGCAATACCATTACTATTTTGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACAGTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGACTTTCCCTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGGTACAAAGCCAATGCCTACTGCAACATCAGACAAATGGCCAAAATACTGACCGGTGTTTAAGGCTGAAACATGACATCCAAGACCTTATTGATTCAGAGAAAATTGAGCCACCAAGGGCAAACCGCCCCAATGTCACTACCAATCCCCTCCCCACTCATGCTGTACCTCCTCCTGCCAATATAAACATGATCGAGCCGACATTTTCGAGTTGGGATCCGTCTCTCCTTATCACGCCAGCCGGAGAAAAGGGAGAAACGGATGGTAGAGACATGATTGGAATCCGGGAGACGAGATTGAGCCCCCACCTCGAGTTCACATGCTCCGGTGGGATGATTTCTACGACAATCTCCCAACCCCTGAACAACCCCTCCAATTACTCCCGGAAAGCCCAGAAAGTGAAACATTTATCCTTTACCCTCGCTCGAATTCCTCAACCCTTTGATGAAAGCCCTAGTTGCTCGGACCCTACAGACCTAAAACCCCTCCCCGCATCTTTGTGGATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGCAGGGCCAAACACATGTGTCATTGGACACTTCACCATCTCCTCCCGTCAAAATCATTTTCCACATCCGGATGGCAAAGACTATCACTTGA ATGATCAATAACATGAGTAGGCAATACCATTACTATTTTGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACAGTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGACTTTCCCTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGAGAAAATTGAGCCACCAAGGGCAAACCGCCCCAATGTCACTACCAATCCCCTCCCCACTCATGCTGTACCTCCTCCTGCCAATATAAACATGATCGAGCCGACATTTTCGAGTTGGGATCCGTCTCTCCTTATCACGCCAGCCGGAGAAAAGGGAGAAACGGATGGTAGAGACATGATTGGAATCCGGGAGACGAGATTGAGCCCCCACCTCGAGTTCACATGCTCCGGTGGGATGATTTCTACGACAATCTCCCAACCCCTGAACAACCCCTCCAATTACTCCCGGAAAGCCCAGAAAGTGAAACATTTATCCTTTACCCTCGCTCGAATTCCTCAACCCTTTGATGAAAGCCCTAGTTGCTCGGACCCTACAGACCTAAAACCCCTCCCCGCATCTTTGTGGATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGCAGGGCCAAACACATGTGTCATTGGACACTTCACCATCTCCTCCCGTCAAAATCATTTTCCACATCCGGATGGCAAAGACTATCACTTGA ATGATCAATAACATGAGTAGGCAATACCATTACTATTTTGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACAGTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGACTTTCCCTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGAGAAAATTGAGCCACCAAGGGCAAACCGCCCCAATGTCACTACCAATCCCCTCCCCACTCATGCTGTACCTCCTCCTGCCAATATAAACATGATCGAGCCGACATTTTCGAGTTGGGATCCGTCTCTCCTTATCACGCCAGCCGGAGAAAAGGGAGAAACGGATGGTAGAGACATGATTGGAATCCGGGAGACGAGATTGAGCCCCCACCTCGAGTTCACATGCTCCGGTGGGATGATTTCTACGACAATCTCCCAACCCCTGAACAACCCCTCCAATTACTCCCGGAAAGCCCAGAAAGTGAAACATTTATCCTTTACCCTCGCTCGAATTCCTCAACCCTTTGATGAAAGCCCTAGTTGCTCGGACCCTACAGACCTAAAACCCCTCCCCGCATCTTTGTGGATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCACCGTGATCCTGTCCTTAGAATGCAGGGCCAAACACATGTGTCATTGGACACTTCACCATCTCCTCCCGTCAAAATCATTTTCCACATCCGGATGGCAAAGACTATCACTTGA MINNMSRQYHYYFDFQGMITYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKNSEVNVLSDVKPKTPRTFPPLGITLAAPWKSFKSMVYSRLFPHLRHQILFLLEKIEPPRANRPNVTTNPLPTHAVPPPANINMIEPTFSSWDPSLLITPAGEKGETDGRDMIGIRETRLSPHLEFTCSGGMISTTISQPLNNPSNYSRKAQKVKHLSFTLARIPQPFDESPSCSDPTDLKPLPASLWMDSDELDQYGTNDDMDFVNNEEAQHMASKSHRDPVLRMQGQTHVSLDTSPSPPVKIIFHIRMAKTIT Homology
BLAST of Lag0000997 vs. NCBI nr
Match: CAN83305.1 (hypothetical protein VITISV_008192 [Vitis vinifera]) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-08 Identity = 46/91 (50.55%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Lag0000997 vs. NCBI nr
Match: KAF5932778.1 (hypothetical protein HYC85_028949 [Camellia sinensis]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-05 Identity = 63/184 (34.24%), Postives = 84/184 (45.65%), Query Frame = 0
BLAST of Lag0000997 vs. NCBI nr
Match: KAF5931647.1 (hypothetical protein HYC85_027818 [Camellia sinensis]) HSP 1 Score: 59.7 bits (143), Expect = 5.3e-05 Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Lag0000997 vs. NCBI nr
Match: KAF5933751.1 (hypothetical protein HYC85_029922 [Camellia sinensis]) HSP 1 Score: 59.3 bits (142), Expect = 6.9e-05 Identity = 51/148 (34.46%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Lag0000997 vs. NCBI nr
Match: KAF5934569.1 (hypothetical protein HYC85_030740 [Camellia sinensis]) HSP 1 Score: 58.9 bits (141), Expect = 9.0e-05 Identity = 52/148 (35.14%), Postives = 71/148 (47.97%), Query Frame = 0
BLAST of Lag0000997 vs. ExPASy TrEMBL
Match: A5BJ71 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008192 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.5e-09 Identity = 46/91 (50.55%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Lag0000997 vs. ExPASy TrEMBL
Match: A0A7J7FYW8 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_028949 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.1e-06 Identity = 63/184 (34.24%), Postives = 84/184 (45.65%), Query Frame = 0
BLAST of Lag0000997 vs. ExPASy TrEMBL
Match: A0A7J7FU58 (Ribonuclease H OS=Camellia sinensis OX=4442 GN=HYC85_027818 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-05 Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Lag0000997 vs. ExPASy TrEMBL
Match: A0A7J7G0M1 (Reverse transcriptase OS=Camellia sinensis OX=4442 GN=HYC85_029922 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.3e-05 Identity = 51/148 (34.46%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Lag0000997 vs. ExPASy TrEMBL
Match: A0A7J7G0P3 (Retrotrans_gag domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_029942 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-05 Identity = 52/138 (37.68%), Postives = 65/138 (47.10%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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